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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000168:645108..650057- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01651.3 ID=Blg01651.3|Name=Blg01651.3|organism=Branchiostoma lanceolatum|type=mRNA|length=4950bp|location=Sequence derived from alignment at Sc0000168:645108..650057- (Branchiostoma lanceolatum)
AACGCTTCGACACATACATACGAGTACTCATGACACTCGTCTGGAACATT
CTATAAAATCAGTAGCTTTCAGAAAGAACCTCTATGTTCACTTCGTTTTC
TCCCTGTGATGGTGTATCGAGAACGTGCAAGCGTCAGACCTGTGTACGTA
ATATTGGTAATCTCAGATATTGTTCTGACTCGCTCCCACCCCCTTCAGGA
CCTGGATTGGTGTTTGTGGTCTACCCAGAAGCCATCGCGACCCTGCCGGG
TTCCACAGCTTGGGCCATCATATTTTTCCTCATGCTCATCACACTGGGAC
TGGACAGCTCGGTAACATGCCTTCTTTTATATGCCTACGCTTTACTCCCA
CCGTGAAAACGGAGGTATTGAGTGTTACTGTATATGTGTTAGTTTATTTG
TTTATCTGGGTGGGCGTCCACAATTATTTGAATATTGCATCATGAGTGCC
ACTATGTAACGTGAAAGTGGTGCAATAGGATACTTGGAGAGCTGCAAGTC
TAGTTTGGGTCGTTTGCCATGTGCATTTCTCTATTCAAGTTCAATCGTCC
TATCCGCGACGAACAAACTAAAAACGCTCAGCAAACGGGATTGATTGACA
GATTTTCCACACGACACTCTTATATCTGCCTTGCAGATGGGAGGGACGGA
AGCAATCCTGACCGGTCTGAGTGACGAGTTCCCCATCTTTAGCAGAAAGC
GGGAGCTGTTCACGGGCGTCATACTGTTCGTGGAGTTCGCTCTGGCGCTG
ATCAACGTCAGTCAGGTACAGATCAATGACTCATGTAGATGCATCATGTC
ACATGAGTGTGCAACAAATTGTAATGATATTCTCAGAGCTTTTGATTTTC
TACCCCTTATTGGACTTTTTGCCTTCACGGAGAGGCAAAACACCATATTG
TGGACCCACACTAAATACTGTCACACTAAATACTGTCACTATTGATATCT
ATGTTCCATCTTAGGGCGGCATGTACATGTTCCACATGCTGGACCAGTAC
GCCGCCGGTACATCTATCCTTTTCGCGGTGCTGTTTGAGGCCATAGGCGT
GTCCTGGCTGTACGGTAAGGCGACTTTAGTTGCACCTCATCCCATACATG
TAGTCTTTACTACAACTTCAATAAGACTGTCGTATGTAAAACCACCCGAC
GTGTTCTATTGATTTATTGGGGCGTACACCAGGATTCATACAATGTACGG
TTAAGTTTGCGTTCAGGTCTAAACATCACGACAGACCAGTAACGTAAGAT
GTTCCATTTCGTAAGTGCTGTGTATGTGTCACAAGTCAGCTCCAGAAACA
AGTTCTAGTACCTAACACATTGGCAAATAGCCGGGGTGCCAGCCTTTTTA
GCTTTGACTTTGACTTTATTTGGGATCCACAATTAGCACAATGAATGTAG
CTGGTCCTTTAGTCTGCTCTCTCGATCGCTTCCGTAGCCATTACTGCGGA
AGTCTACGGAAGCGACCGAGAGAGCGGAGTAAAGCTGAAAGCCTGTAGCT
GGTACCCATGCTAATTGACACCTCCTGACCTGTATTTAACAACACATGTG
TCGTACCTAGGTATGNGTATTTAACAACACATATGTCGTACCTAGGTATG
ACTCAGTTCAAGCAGGACGTCGAGGAGATGCTGCACTTCACCCCCGGCCT
GTGGTGGCGCTTCTGTTGGAAGTTCGTTAGCCCGCTCTTCTTGCTGGTAA
CTACCACATACTTAAAAACTTTGTACAACCACGTGTTCAATTGATCTCTA
TAAGTAGGTATAGGTAGCGTGCGTAGTCCAGTGGTTAGCGATCTTGCCTC
TGGAACTAGAAGCCCCAGGTTCGATCCCGGCTCACCCGACATGCACGCTA
CCGGAAAGGATCGCAGTCCTTAGGACGGGACGCCGTGGTCCACTGTTCAT
TGTGTTATTTGAAAAGAGCTAGGGGAATTTCCCCGGTACAATGAACCTGT
AAATACTGTACATAGCGTCTGTCTTCTTCTCTGTCACGGCCAGTGGAAGA
TTAGCTCTTCAGTGAGCTAAAACTGGATCGAGATTACTTTCCCTTTTTTC
CTTTATGAAAAAAATGGTCTGTGAACAAAAAGATCTATTGGTTTACACCT
AATTAATTCACGAAACATGTCACTTGAATGAATTACTACATACAGGTATA
CATATAGTGCTTAAATTAGGCCACAGCATGTAAATTCTATGGATGACACA
CTCTGCAGATACAAGTTTAATGCGAGAGCGCGAAAAAAAGATGGGCAAAA
AAAAGGATGCTTAAATTTTAAAGTGAAGTGACAAAATAAACATGGCATCA
CAGACAACAAGTCATTTCTGTATTCAAGAAGTAAAGCCTAGTATCCCAAG
TTGGTAACTACGTATACACTCAAGGCTACCACACCATTGGCGCTTCTACA
CGGCTAAATAACTAGTTTCTCTTTTACCTCTACACACATATCTACCTCAC
TAGCTCAAGGCTTTTACACGACATATTTTCCCACTTTCGGCATTTTTCTC
TTGTGTGGACCATTTTTCTGAAATCCTTCTTCCCCTCTGCGCAGTTCATC
ACGATCTTCAGCATAGTTCAGTACAGGCCCCTGGCGTACGAGACGTACGT
GTACCCGCCCTGGGGAGTGGGTCTGGCCTGGTGTCTCAGCGCCTCGTCCA
TGGTCTTCATTCCGGGGTACGCCATCTTCAAACTCCTCAAGTTACAGGGA
CCTTTCCGAGAGGTAAGCAACAGTTCAATATAGGCTACATCATGAATCAA
TGGTATTATTAGTAGATTTAGTACTGATATGTTGATCACCAGGAAACCCT
GCTATGTGTGACCTTAGAAGTCCGCAAGCAAGACGAGAAAACGCCAGTGT
TATGGACGTTTGCTCAAACTCGTATGAAAAGTGTTTCCGCGTTGTAACAA
ATGTTAAAACCTACACAACATTGCTGAACTGTCATTAAGACGACGTGTGC
ATGAGTGTCACAGTAGAAAAGAATAACATCAGTGACAACACATGACTGCT
GCCCCCCCCCTCCAATGGACAGCTGTCGGATTTCGACTTATAATTTCCTC
AGACGTTCACTTTTGACACACTTACATGTGCGTGAGTTCTTTTAGACATA
TCCTACGGTTTTTGATCTGTCAGCATCTCTAACCGCCTACTGTTTCCTTC
CAACAGCGCCTAGCTTACGCCATAACACCAGCATTCGAACACGACGAGAT
CAGAGACAAGGGGGAGGTCAAACGTTTCCAGGTGAGAAAAATACCCAACA
TCGATGGCAGACAACTTAACGTGTCTCTTTTCAACTTGTAAATCATAACA
TTTCGTGACAGTAGTTCAAGTTCAGACCACCTACGTTCTGACACTTGGCA
CTACATGTTAAAACATGGTTAACGGAATAAGCCTATCCACGTGTGCATAG
CAAAGTCACCACTTACGCTACTATAGCCAGCGCACGCCGAGCTTTCCATC
TAGTTCAATATTAATGTTGTCTATACTTTCATCTCTTTAATATCCGTAAC
GTGTTTCCCTGTGTAATTGTTCAACAGCTTCGTCATTGGCTGGCAATTTA
AATACTCTAAGCCAAATGACCAGGATCCACCTGCCAGTACTTCACTGTCG
GATCATCACGAATAGAAGAATCGTCTTGAGATCCCCAGTTTAGCTGTCAT
AGCTTCGTTCAGCTGATGTACATGTCTAAGTAGGTAGAAACCGCAAAAGG
ACTGCGAGAGGAAAGTGAGGAAATTTGATGACGTTTTTCATGAACGCTGT
TCATAACCGGGACACGAAAAAAAAAATAATCAATGAGATTTGGCAAGTCG
GCCCGCTTTCTTCAGGCCGGAAATTCGTCATGAAACTTCTTTGATAAATC
CCACATGTGTCCTTCAGCTCTCATGCGACCTCTGAGCAGTAAGTGCTCTC
AAAGGTCAAACGTTTCAAACGTCATCACCACAGGTTGTTGAACGCAAGAA
CGTAAGATGAAGTAAGCATTTGATCTGTGATACCAAAAAACTTCAAACAC
ATGTAGTCATATATAAATATACTCCTGGTTAAGACATTTTCAACAGAAAG
TACCGAGGTCAGTCGTAGCATCGGAAGTGTAGCGCACACCGCGCTCGTAG
CAGATTGTCTTTGACAGATCTATACATTTTAAGAAGTTTTCAAATATTTC
GATGTTTTAAGTGAATTGCAGTGTCTGTAACTATATATGCGATGTTTAAT
GTGAAAAGGTAAAAGAAAACAACGTTGAATTGTGTTATGTGTGTTGTGAT
TGTGAAGTATATAGTTGAGGTACCTGTACATCTAACTTGTAAATAACGGT
AACCTCCCCGATGCTTATCATTATGCTTTTGTATCTTGTGATGTAGTTGC
GGGATAAATGTATAGTCTCTAATACTATTCAGTTCACAGCACCACTGCCA
CTTCTTCGCAAACTGAATTTAACTTTCTTTGTTATTTGATCACAATATTG
CTGTACAGGACTTTGGGATGAATGTCAGTGCGTTACCATTTAATATCTGT
AAGGTAAGACGCACTGTACTGTCTGAAAAACTGATTGTATGTAGCATAAG
AACGGCCGTAATACGTGGCAGTTTGTAGTTACATCTGTACAAGATATATG
TTATGTTGTGTAAACGGTTGAAGTATGGAACAAATATCGTAAATGATATG
ATTGTCAACGTATCCTTTTTCTATCTATTGTAAACAAAATAGGAAAGCTG
TTGATGGAAAATGCTGTTTAAAAGTAAGTGATTGTTTGCAGTGCTATAAA
TACCAAAGATAACACGTATACATTGTGTTGGGTGTCTACAATGCGTTATA
TTTCTATTCCTTACGTACGTAGTTAAATACATGTACATTCAATTGTTTCC
CAATATTGTACTCTTTATCATGGGCTAGTAATACATGTATAAGCCTCTGA
TTGCAAAAAAAAAGATGTAACGTTACAAAACGAATACAGGTCAGTGAAGA
Coding sequence (CDS) from alignment at Sc0000168:645108..650057- >Blg01651.3 ID=Blg01651.3|Name=Blg01651.3|organism=Branchiostoma lanceolatum|type=CDS|length=825bp|location=Sequence derived from alignment at Sc0000168:645108..650057- (Branchiostoma lanceolatum)
ATGTTCACTTCGTTTTCTCCCTGTGATGGTGTATCGAGAACGTGCAAGCG
TCAGACCTGTGTACGTAATATTGGTAATCTCAGATATTGTTCTGACTCGC
TCCCACCCCCTTCAGGACCTGGATTGGTGTTTGTGGTCTACCCAGAAGCC
ATCGCGACCCTGCCGGGTTCCACAGCTTGGGCCATCATATTTTTCCTCAT
GCTCATCACACTGGGACTGGACAGCTCGATGGGAGGGACGGAAGCAATCC
TGACCGGTCTGAGTGACGAGTTCCCCATCTTTAGCAGAAAGCGGGAGCTG
TTCACGGGCGTCATACTGTTCGTGGAGTTCGCTCTGGCGCTGATCAACGT
CAGTCAGGGCGGCATGTACATGTTCCACATGCTGGACCAGTACGCCGCCG
GTACATCTATCCTTTTCGCGGTGCTGTTTGAGGCCATAGGCGTGTCCTGG
CTGTACGGTATGACTCAGTTCAAGCAGGACGTCGAGGAGATGCTGCACTT
CACCCCCGGCCTGTGGTGGCGCTTCTGTTGGAAGTTCGTTAGCCCGCTCT
TCTTGCTGTTCATCACGATCTTCAGCATAGTTCAGTACAGGCCCCTGGCG
TACGAGACGTACGTGTACCCGCCCTGGGGAGTGGGTCTGGCCTGGTGTCT
CAGCGCCTCGTCCATGGTCTTCATTCCGGGGTACGCCATCTTCAAACTCC
TCAAGTTACAGGGACCTTTCCGAGAGCGCCTAGCTTACGCCATAACACCA
GCATTCGAACACGACGAGATCAGAGACAAGGGGGAGGTCAAACGTTTCCA
GCTTCGTCATTGGCTGGCAATTTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01651.3-exon-Sc0000168-1570713199:649747..650057 | Blg01651.3-exon-Sc0000168-1570713199:649747..650057 | Branchiostoma lanceolatum | exon |
| Blg01651.3-exon-Sc0000168-1570713199:649293..649421 | Blg01651.3-exon-Sc0000168-1570713199:649293..649421 | Branchiostoma lanceolatum | exon |
| Blg01651.3-exon-Sc0000168-1570713199:648994..649093 | Blg01651.3-exon-Sc0000168-1570713199:648994..649093 | Branchiostoma lanceolatum | exon |
| Blg01651.3-exon-Sc0000168-1570713199:648362..648462 | Blg01651.3-exon-Sc0000168-1570713199:648362..648462 | Branchiostoma lanceolatum | exon |
| Blg01651.3-exon-Sc0000168-1570713199:647346..647513 | Blg01651.3-exon-Sc0000168-1570713199:647346..647513 | Branchiostoma lanceolatum | exon |
| Blg01651.3-exon-Sc0000168-1570713199:646827..646901 | Blg01651.3-exon-Sc0000168-1570713199:646827..646901 | Branchiostoma lanceolatum | exon |
| Blg01651.3-exon-Sc0000168-1570713199:645108..646530 | Blg01651.3-exon-Sc0000168-1570713199:645108..646530 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000168 | genome | Sc0000168:645108..650057 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01651 |
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