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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000168:216996..225683- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01665.5 ID=Blg01665.5|Name=Blg01665.5|organism=Branchiostoma lanceolatum|type=mRNA|length=8688bp|location=Sequence derived from alignment at Sc0000168:216996..225683- (Branchiostoma lanceolatum)
CCACTACTACCCCCCGACCAAAACCTCTGCTTGGAGAATAGGAGGCAAGG
GTCTGAGCGAGCTCGACGTAGAATTTCTGATATCACCATAATCACTTCTT
TATATTCTCTTGAATTGTGTCTCCGAGAAATGGAGTTAGTTTCCACACCT
TCGTATCTTCTGGTGCCGGTGACTGACTTACTTTTGGGACGTCGACTTGT
CCAGAATTAGTTCGTCGTATTGCATGTCGGTCGATGACCTCCTTTCCAGA
CAGTAGAATTAGGTCAAGCTTGGTGGTGTCCACAAATGAGGACAACAATT
TGTATCAGCAGAGTCGTGCTCATTCATCGTGGGGATAGCTCTGTAAATCA
TGAAAAGTAAAAACAAGTTCCTACATCTGTAAAATTTATCCGTGTCAACT
TGAACCGTGATAAAAACAGCAGGAGAGATGAAAATTTACTGAAAAACGAG
TGTCGAAGGACAGTCGTAACTTTGTTTTACGTCATTTGCCCTAAATACCC
AACACCATTCACCCCTCAGTTGTGCCAGGATGGTACAATCAAAGTAAGCA
CCATACCATCTCTCCCAAACACGTTATTTACGTTTTGGGCCTGAGGTCCG
GACGGTGTATTCACAACAATCCGAGATCTGAGAAAGGTGTCCACGGAATA
AAGAAAGTCGCTATTGGAAGAACCTTACTTCCAACGCTGAAGAGAAGTGG
TGGTCATCAATATGTAAGCAACTAAAAGATCCCCAGGTTTCGGAAGGTGT
GTGTTGTATTTCCGTTATCACGTTTGACGTTGGTGACCACGATGATTTGT
CCTGGTTCATTTTAGTCTTCTATATTCTATCTCGTGCCTTCTTCACACGG
TTACCATATGATAAAAACTATGTCTTTTCGGTTTGTATTTCAAATCTTCA
AACACAGATGCCACAATAACATGAAATGCTGAAGGGGTGTGATCTGACAG
GCGCATGCAACGCTCAAACAATACTTTAGCCAAAATTGACAGTGTGTTTG
TCACTGAGATTGCAACGACGGTTAGATCTTTTCCACAATGTTTAAAGATA
GATGAAATAATCTAGATAGTATGTGAAAGTCTACATGCTGGCCACATATT
CTAATCTTGCTTGCCAGGCTACGGTAGGTCTGATTACAAACTCGTGTTAG
GGAAGACGCAAAATCGACTTGGCTGCATCCCCGAGCCGCGACTGCTATCG
CTAAGGGAGGCTAGTTTCATGATACAAGTTGGTGGCCATAACACGTGTCC
TACATTTATGTGTAGGTTAATTCATTTGTATCCACTTGACTGTTTGTATG
TATAGATGCACTTGACCTTACGAAAGTCGCTGTACTTTTGTTGTGTCAAT
AGATATTAAGATACATTGACAATGACTGTCATTGACTGAGACTGTGAATC
CATACATCTCATCACAGTCAGCAGGGATTTTCTATTGATTTTTTTCTAAC
CGAACAGAAGTGGAGAAAGATTATTACTCCGATGATAGTCGACCTATGAT
CATTTGCAGGAAAACAACTTTGTAAAAAATAGCCCATTTTTCGGGACAGT
GAACATTCCACAATCAATTTCGCGCCCAGAGCGTATTCGCATCCAGTCTA
CATGTTGGGACACACGCCACCGCTTCGCGATGCTGAACTACATGCGCCTA
TATCTCCAAGCAGATGTTAGCTCTGGCTTGCCTTTGAGTGTTTTCGAAGC
GTTTCGTATGTCTCCGTTGGTTAGAAAGAACTCATGTCCACCTACACTAG
AAATGACGTACCAAACGCTCAGAGCAAGCCAGGACTAACATCTGCCTGGA
GACATGAACAGGTTAGTCCACATCGCCCAACGATGGTGTGTCCCAAATGT
AGGCTGAAAAATGGCATCACGTGACTTTTATGATCTATTGCTTCTATCCT
GACACCCCCTCTCCTTGCGGATGGTACGTCTCGTCACTACAACAGACCAA
TCAGCAATGACCTGAGTGAGGTGACTTCAGGACACTGTACCAGTATATCG
TATATGAACTAACATATAGGACTCACCGTTGATAATAGTCTTTCCCCTAG
TGCAGGTCTACTGCTGAGACGAGATGAATCTGTGTGTACAACTTATGTTG
GTCGGCACTCTGTCTCAGGCGGTGTTGTCCGCCCGCATCGTCCACTTGGT
GCCGCCTTACAGCCGAGGGAGTCACTTCTCCGTAGCGTCCCGAGTGGCCG
AGGGTCTGGCGGACCGAGGGCACGATGTAACCATGGTGCTACAAGGGGAC
GGTTACAGAGGCGTCAGTCACAAATACCGCGTCGAGAGGACCAAATCAGC
CTTCACCGAAGACGCAAAGGAGGACAACTTTCAGAACTTTCTTTCCCATA
CCCTCTCTGGTCAGTACGACTCCGACATGGTGTCCAAACTCTTCGGACAC
ATGGTCGAGGAATGCCGAGTGATGCTCAACGACGAGGACCTTTTCCAGAC
CATGAATTCTTCCATGTTCGACCTTGCCGTGATCGACCCGTTCAACTTCT
GTCCGTACATCTATGTTCAGCGGCTGGGCGNCTATGTCCAGCGGCTGGGC
GTCCCCTTCGTCGTATTGGACGCCACCCCGGCGTTCTTCAGCGGCCGGAA
CGCCTACCTGCCCTCTCCCCCGACGTACGTGCCCACTCTGTCCTCCCAGC
TCACCGACAAAATGGACCTACCGGGTCGCCTGAAGAACACTCTGCTGGGA
CTGGTGTCGTCCGCTATGGACTCTTACATTCTCTCACTCTTTGATAAGCT
CCGGCTCATCCAGGGGATCTGTCCTGACCTAACCTTCGCACAGATGATGA
GCAGGGCGGAGTTTTGGATGTTCCAGTCGGACGTGGCCCTCGACTTTCCC
CGACCCACCATGCCGAACGTGCAGTTCGTCGGAGGCCTGACAGCTCGGCC
GGGAAACCCTCTACCTCAGGTAAGCACAGCATTTTAAACATACGGCCCTG
TCACATTTGTCGTAGGCCGTCGCACGACCTAGACGCCGTAGGATCTTAAA
GAGAAAGGTGTGACAGAACCAACCGCCGACAAGGATCTAAGACAGCATTT
TTGATAACAAGAGAGTTTAATATCGTACGACAAATATAGCTTTACCCCAA
GAATTCCCTCAGTTTGCGTTCGTTCGTTCGACGATCGTACGACAGATGTG
ACCAGACCCTTTATCTTCTCATTGATCTGTTCCTAAAGAGTTTGTATATA
TCATCATTGGAACTGATTAAGTGAGCGGTCTCTTTTAACGCACAGGAACT
GGAGGAGTTCTTGGAAGACTCGGAGCACCACGGCGTCGTGGTGGTGTCCT
TCGGCTCGGTCATCGACCACGTCCCCGACCGGACTCTCCTGGAGAAGCTG
GCGGAGGGACTCGCCAGGCTGCCCCAGCGGGTCGTCTGGAAGTTCACGGG
CGTGCCGCCGTCCAACCTCGGCAACAACACGAAACTCATGGCCTGGCTAC
CGCAGAATGATTTACTAGGTATTTATTGCCTTCTAGCGATTGTGAGGTCA
ATAACCTACTATTACGGTAAGCCTATAATTTCCAGCAATTACCGGCTGTT
ATGACTTGAGCTAAACGTTGTTAATTTTCTCACATCACATACACGCGTAT
AGTTTGATGGTGAAAAAAGGACAACTTTGCATACAGGGGGAGAAAGCTCA
AATCGGACAAAATTGCCTTCAAGTGAAGGCGAGGTCAATTACCTATTAGG
CAGTAATCCTTTGAGTTGGAGCTAACACCGGTTGTTGTGATTTGAATTAC
ACATTGTTCTCACATCATACATACGTGCATAGTTGTCCGTGAAGAAGGAC
AACTTTGCAGGGGGAAAAAGCTCAACTGGGATTTTTACATAACGCCTTCT
GGCGATGTAGTGAGGTCAATAACCCCCTAGCAATCATTTCATTTGGAGGA
AACACCGGTTGTTGTCACAGTCTGTGACTTGAGCTATACGTTGTTTCTCA
CATACTGCATATACGCGTATGGCTGTGATAGTGAAAAAGGACAACTTTGC
CAGGAGAGAGAGCTCAGTGTGGAATAACCTAAAACTAGGATCATCACTAG
TCTACCTGTAATTTGTATATTTATATGTTTGTCCTTTGTTCCGCCTATGA
GCCTTAGACACTTAGGTCCCTGTAAACAGATGGGAAGTGACGGGCTGTCA
CAGACATATATATCCTCCCGAGCATGTTATTCCTTCTCCTCTCGAGTTGA
TCGCAGGGAGTATCACAACACCCGGCGCGTGGCTTTGCGTGAGGTATTTA
TTGACTCAATGGGATGCGATCCAATCCAACATCCGTCACAACGTGACCTC
GCTTTAGGAACACCGTAAAGGTTACTCCAGTTCAAAATGACAGATGTGTA
TACTTGTACCCCACACAAAAAAACAGATTTCAGTCGGACATTGTATACAA
TTTTAGACGAAAAGAATTCAGTATATTTCTTGTATCATATTTATTATGTT
TTATTTTGGACAGGGGTCTAGAGAAAGGACTGGTCTGGTTCTGTCACCCC
TGTCCAGTTACCTTTTGTAACGAAGCTTTAATAAATGAATAAATATCATA
GGATAAGCAGTTTAACAAAAATACTTTTTAAGTGCTTGAGGAAGCGTTTT
GAACGTGTAATGTTGAAGCTGTGTCTTTTTATTCGGCACCGCATCGCAGA
GTTCATTGACCTATTGCTCTTCGCAATTTGTCTTCCAGTGCCATTGATTA
TTTATTCTGTAACCCATTCACACAAAAATAGATCTCTTTGTGACTCTTCC
AACTGAAGGTGATCTCATGGAGGTCCGACATAAGCTTTTGTGCATGCAAT
TGGCGGATATTCAGATCCTTCACTCACAAAACAAAACGACAAGCGTCTTT
ACGCGAAAGGTGAAATGCAACGTGATTATCGCTGATTGACGAGGTAAGTA
GGGGTCGGGGAAGGTCGAGTCTTGGTTCGAAAGCACGATGTGTTTATGTC
TCAATCCACACGCCCTTAGTCGTTACACGGTCCGGTACGACTGTTTTCAA
AACAAAACCTGGGAAATCCCCCCAAAATACAAGTTACAGTACAGTTCGTA
CAATTGGAAACATAACTTTATAATGTACGAGGTGCATTCAATGCAGACTA
GTTTCCACAAATACATCTTATCCGCCCTAGAACCCATGTTGATATCATAT
GAAAACTGTGCTTTGTACCATATCTAAAATGATGATATGTTTTGACGTCG
AGAAATCTATACTGAGATAGCAATAAGGTGGAAAGTCCAGAAAACAGCTA
ACTAATTCCCGTGATACAAGGGCAATGACCGTTCATAGACCCAGTTCAAG
GGACGCCATGTTTCCCAGAAAGATGCTGTAAAAGAGGAAATGTTCGAGGT
GGGGAGAAATAGAGTAGTCGCGAGGGTTTTAGGTTCCCGGCTGAAACAAT
GGGGTAGGCGGACAGAAGACAGAAAAATTCGCGGCGGTTTTAAGTTCACG
GTGAAGGGGTCGCCACGAAAATACACACACATGTCAAACCACCGCGAACA
TTTCCTATTCTACAGTATTGAGGGCGTGACCGTTCCAGTCCAGATATACG
TCACCGTCCGTCACCCCGCTCAGGTCACTGGAGTTCATGTCTGGGTCGTC
TCAGTTCAGCTGAGAGAAAAATACAGAGTTAAAGGATAATTTCCGGCTCT
TTCTTTATCCATTGTTTTTTTAATTTCACACAAGAAATCTGTACATTTTG
GCAGTGTCATTTAATGATAAAGAATTATGGATATGCTGTCAAGATATGAT
ATATCATGCGGGAAATTGCATCTCCGTTCTTGATTATGACTAACCTTGGC
TATAGATTATGGAAAATCACGACGTTATGGAAGAACGACTTGAATGTGCC
TCACGCCCATCAACAAGGCCATTGACACTCTCACTAGCCGTGTTTTCACG
AGTGCGGACGTCCTTGACGGACAAATGTAGAAGGTGACATCTACTTACCC
TTGTATTACGTACTGTATATCAAATCATTTTCGCCGCGGCGCATACAATT
TCCCGGTAGGGGGGGAAGGGTTTTTTCGCGGTGCTAAATAGGATGGGCAA
GGTGTGCGTAAATAGGCTAGATGCCAGTCTTGCTACATGTAGCTTTAGTC
TGAAGGGATCGGTGGAAGCGAGCTGAAGCTAACAAGGCCGGCGTCCAGAC
TAGTACGTAAAAAGAGGTTGAGATAAAAGTATCTGGATTCATTTCAAGTA
CTTAACACTTGCAAACGGGATGTCAGCAGAATGTAACCTAAAGGAAATAT
TAAACCCAGGCTTCTAAATTTGTTACCAATTGCAATATTTTATGTATAAT
TGTATACCATCTAATTCAAAAGTACAAATTGTAAAACAAGATATTCCATA
TATAAATATGTAAATATATATATATTCATAGCAGCAAAAAATGCGTAAAC
TATGCTGATGAATGACAGGTGTGATAACATTGTCTTTCTCAATAACTTTA
GTACACTATCTGACAGATGAGGTGTATATCATGAGAACTAATATCAAATC
AAATTAATGACTACAATAAGTCCACAGGGACTTACTTGTCTATCCCATGT
TCACCACAGCCCACCCTCACACCAAGGCCTTCGTGACCCACGCGGGAATC
AACGGCCTGTACGAGGCGCTGTACCACGCTGTGCCTGTGGTCGGACTGCC
CATGTTCGCCGACCAGTTCGACAACATGGCTCGCATGACGGGGAAGGGTA
TGGGGATAACACTGGACATCTGGAACCTCCGGCCTGAACACCTGTCTGCA
GCTGTCACCAAAGTCATCCAGGACAAACAGTAAGCACAAACACACAGTTC
AACCTCTTGAGCACCCAAACATAGCCTTAGCTGACTCTCATTATGCTGAA
TCAACTGGCACAAGGTGGCAAAGTGGTCTGTAAAGTGGCAAGATGTCTTG
TGGTTAGGGATGTTGACTTAAAGATTCTAAAGGTTTTTGGTTCGAAACCC
AACGCAAGCAAGCCCCAATGTTGTGCCCCTGGGAAAGGCACTTTACACCG
AAAAGAGTGGATCAAAGCTTACAATCTGGGCATCTTGAAAGTATGATAAT
CACCTATCATGTCAATCTTTCCACAAATGTGGTAAATCTCGATAGATATA
TAAAAGACTTCAAAAGACCAGTAAAAGCTTGAATCATACATGTACATTTT
GTATTTTTCAGCGAACAATCCGTCAAGCAACTTTGTGTACATGTAATAGC
AGTCTGTTCTATCATAATTACGGTACATTTTTCCTGACACAGGTACAAGA
CCACTATTGACCACTACTCCAGGATCCATCGCGACCAGCCCCTCCCTCCA
GTCGACCGTGCCGTGTTCTGGATNCCTCCCTCCAGTCGACCGGGCCGTGT
TCTGGATCGAGCACGTCCTCCGCAACAACGGCGGCGATCACATGCGCCCT
CAGGTCTTCAACCTCCCGTGGTACCAACGTTACATGTTGGACATCTTTGC
TATCATTGGCTCTTTCATCCTTACTATACTGCTGGCGCTTATTGTGGCTC
TGAGAAAAAGCTTCTTGTTTCTCATCACTTTTGGTAACCTTCTATGGTTG
TCTCTGAAAAATTGGAAACTGAAAACAGAGTAGACTGTGATGATCTTTGA
TTTGTAAGCCAAGTCATTGCCAGTATGATACTACCTCAAAGGATAAAAAT
GATGTATTCTTAATCCTGTTGGAGATATTCTAGCTGTACATGAATGTCAG
CATATAGATACTCAAGACATTCTAAAACCTTCTCTTGGATACTTTCTACT
TGAGATTTTGGGCAGTAATCATCATCAGAGGATCTGTGGGAGAAAAGAGA
AGGGTACAATGTACATGGTGAAGTAAAATGTATTTCAGACCTCATGTTGG
TAACAGAATTGTTCACTGAGATAATAATGTGTGCTATTTTATTTTTTCAT
GTATATGTGGAGAGTATATTTGTGGGTTAGTGTTTTGTCACATCTTATCT
AAATAATAACTAAGTTCTAACACTGTTTTTGTTTAATGTTGAACAAATGA
CATAGAGAAATAATGACAAGGTTAAGGATGTGTCATTGAAATTCTATGTA
TAGTTGGTAAATAAATGTTTTATTAAAAAGACTGAGTGTGATGATTGTAG
TCCATGAAATGTTGTAAAAGGTTTCGTTGATATATTACTCCGAGTGGGTA
AAAGAAACCCGTTCGAAGAGCAAGATGGCTGTATGAACGAATGTTTATAG
CAGACACCTACTATATGAAATTTCTTTTTAATTTGCTAAACTTATCTGTG
GTGAAAGCTTGTCTGTAACTGAAGAAATTAGCAGGTAATTTTCGGCAGCC
TCGCACTAGGGCAGAGCGCAGAGGTGCACAGTCCTGGGTTTTGAGTGGTG
CAATTGTACCCTGGCTGCACAAAAGTGCCTCTCGTGGGGTGTAGCTAAGT
TCAATTTGTAACTACATGTACCATAAAATGGGGTTGTGTGTGTTGAGGTT
GTTGGCAAATTTTGTATATGATGTAGGGCAAATGTAACACATACAATGAA
TGATATCGGTGCATTTCCTGTAGGTTCATTTGAAAAGCGACAAAGTAAGA
CACACATTTTTGCACTAGCCCCAATGTAACAAAATAACTCATAAATGAGA
CCATTAAAGGTTCATCTGACCTTGCTACAGTGACAAGAGTAGGTGTGGGG
AGGCAGGACAGCATGGTTTCCATGGCAGCGGTATGGTT Coding sequence (CDS) from alignment at Sc0000168:216996..225683- >Blg01665.5 ID=Blg01665.5|Name=Blg01665.5|organism=Branchiostoma lanceolatum|type=CDS|length=1515bp|location=Sequence derived from alignment at Sc0000168:216996..225683- (Branchiostoma lanceolatum)
ATGAATCTGTGTGTACAACTTATGTTGGTCGGCACTCTGTCTCAGGCGGT
GTTGTCCGCCCGCATCGTCCACTTGGTGCCGCCTTACAGCCGAGGGAGTC
ACTTCTCCGTAGCGTCCCGAGTGGCCGAGGGTCTGGCGGACCGAGGGCAC
GATGTAACCATGGTGCTACAAGGGGACGGTTACAGAGGCGTCAGTCACAA
ATACCGCGTCGAGAGGACCAAATCAGCCTTCACCGAAGACGCAAAGGAGG
ACAACTTTCAGAACTTTCTTTCCCATACCCTCTCTGGTCAGTACGACTCC
GACATGGTGTCCAAACTCTTCGGACACATGGTCGAGGAATGCCGAGTGAT
GCTCAACGACGAGGACCTTTTCCAGACCATGAATTCTTCCATGTTCGACC
TTGCCGTGATCGACCCGTTCAACTTCTGTCCGTACATCTATGTTCAGCGG
CTGGGCGNCTATGTCCAGCGGCTGGGCGTCCCCTTCGTCGTATTGGACGC
CACCCCGGCGTTCTTCAGCGGCCGGAACGCCTACCTGCCCTCTCCCCCGA
CGTACGTGCCCACTCTGTCCTCCCAGCTCACCGACAAAATGGACCTACCG
GGTCGCCTGAAGAACACTCTGCTGGGACTGGTGTCGTCCGCTATGGACTC
TTACATTCTCTCACTCTTTGATAAGCTCCGGCTCATCCAGGGGATCTGTC
CTGACCTAACCTTCGCACAGATGATGAGCAGGGCGGAGTTTTGGATGTTC
CAGTCGGACGTGGCCCTCGACTTTCCCCGACCCACCATGCCGAACGTGCA
GTTCGTCGGAGGCCTGACAGCTCGGCCGGGAAACCCTCTACCTCAGGAAC
TGGAGGAGTTCTTGGAAGACTCGGAGCACCACGGCGTCGTGGTGGTGTCC
TTCGGCTCGGTCATCGACCACGTCCCCGACCGGACTCTCCTGGAGAAGCT
GGCGGAGGGACTCGCCAGGCTGCCCCAGCGGGTCGTCTGGAAGTTCACGG
GCGTGCCGCCGTCCAACCTCGGCAACAACACGAAACTCATGGCCTGGCTA
CCGCAGAATGATTTACTAGCCCACCCTCACACCAAGGCCTTCGTGACCCA
CGCGGGAATCAACGGCCTGTACGAGGCGCTGTACCACGCTGTGCCTGTGG
TCGGACTGCCCATGTTCGCCGACCAGTTCGACAACATGGCTCGCATGACG
GGGAAGGGTATGGGGATAACACTGGACATCTGGAACCTCCGGCCTGAACA
CCTGTCTGCAGCTGTCACCAAAGTCATCCAGGACAAACAGTACAAGACCA
CTATTGACCACTACTCCAGGATCCATCGCGACCAGCCCCTCCCTCCATCG
ACCGGGCCGTGTTCTGGATCGAGCACGTCCTCCGCAACAACGGCGGCGAT
CACATGCGCCCTCAGGTCTTCAACCTCCCGTGGTACCAACGTTACATGTT
GGACATCTTTGCTATCATTGGCTCTTTCATCCTTACTATACTGCTGGCGC
TTATTGTGGCTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01665.5-exon-Sc0000168-1570713199:224938..225683 | Blg01665.5-exon-Sc0000168-1570713199:224938..225683 | Branchiostoma lanceolatum | exon |
| Blg01665.5-exon-Sc0000168-1570713199:222765..223738 | Blg01665.5-exon-Sc0000168-1570713199:222765..223738 | Branchiostoma lanceolatum | exon |
| Blg01665.5-exon-Sc0000168-1570713199:222216..222438 | Blg01665.5-exon-Sc0000168-1570713199:222216..222438 | Branchiostoma lanceolatum | exon |
| Blg01665.5-exon-Sc0000168-1570713199:218905..219124 | Blg01665.5-exon-Sc0000168-1570713199:218905..219124 | Branchiostoma lanceolatum | exon |
| Blg01665.5-exon-Sc0000168-1570713199:218384..218441 | Blg01665.5-exon-Sc0000168-1570713199:218384..218441 | Branchiostoma lanceolatum | exon |
| Blg01665.5-exon-Sc0000168-1570713199:216996..218348 | Blg01665.5-exon-Sc0000168-1570713199:216996..218348 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000168 | genome | Sc0000168:216996..225683 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01665 |
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