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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000168:97915..105523- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01680.1 ID=Blg01680.1|Name=Blg01680.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7609bp|location=Sequence derived from alignment at Sc0000168:97915..105523- (Branchiostoma lanceolatum)
CGAAATTCTTTTTTGGAAATAGGTGCGCTGGTGCACCCAACCAAAAAAAT
AAGGTGCACAGAAAAAAATTTGGGTGCACCAGTTCACATAAAATGAAGTT
GAATGTCAACAAAACAAAGTTTGACTCTACTGCCTCTCTTAAGAATTCAA
TCTGTAATGCTATCTGGATTTCAAATTTCAACCAAGCAATACATCAAATT
AAGTACAAGAAAAGGTTATATTGCTTTTTTTTCATACTTACATTTCTAGA
ATATTCTGTATGCTAGTGTACAAGAGAACCGTTACCCTATAGAGTACAAA
AATATCTAGGTGCACCAGTGCACCCACAGTCAGAAATTAGGTGCACAACT
CCAATTTTGGGTGCACACGGGTGCACATGCACCCACTATTTCGAGCCCTG
CATTCTAAGTGTAAATTGCACTGTAATGGTATCTCCTTATATGAAAGATA
GAGTGGTTGTTTTTTCACATAACTAAATTAGCCTGGACTCCAGCCTTATT
AGCTTCCGTCAATATTGGCAAGGAGCGGAGCTTGGGTAGCGGACGGAAGC
TAATAAGGCTGGACTCCAGGCTATACCTAAATGTCTTAATGTCATATAAC
TAAATGTCTTAATAATTACAACTTACTTGTAGTACTGTATTATGTACAGA
TAACTCATCTTTCTTTTCAACAGTTTTGCCTTTTTGGAGAGTGGAAATGA
AGTCTGCAAGTATGGATCATAAAATGTCTAGGAAATATACTTATTTACAC
TTATCTTTAACAAATGCTGTTTTCTTTTCATCCAATTAGCTGAACTTGCG
CAGAAGGCCCGCAAGGAGATAGCTGAGTACCTGGCCAATGGGAAAGATGA
AAGAGCCAGGATAAGGGTGGGTAGTTGATCATGATTGATAAAAACTAGTT
GGCATGAAAGTTCATCTGAGTTGGTAAAATACCTAATGAGAAATAAACTA
TTCTCCAACTCAAAAAATTTCACTCACCGGAATTTTTGACTGAATCAGTC
GGTCTTCATCAGCTATTTGACCCAATTGCTGTGGGCACGTGATTACTAGT
TTTGTATTGATTATTTTAAAATTTCGTCCTCCCTGAAACAGCTGCATGGA
ATTTGTGTGTTGTTTTCCTTTCTATTGTATGTATAGACACTAAAACTGTA
TATACCTTACTAATTTATGTGATTATTGACATGTTATTCACTTATCTGTC
ACCAGGTGGAGCACATTATCCGAGAAGATTACCTAGTTGAGGCCATGGAG
TTGATCGAGATGTACTGTGATCTGCTTCTTGCCCGATTTGGTCTTATCGA
GAGCATGAAGTAAGTAGTGTTTCACAGAAACAACATTAAGAATGATGTTG
TGATGTGCTAGTAGTTAAAAACTGTCTGACACTGAGTTTTCCATTTCCAA
ATTGAATTGACTGGCATTATATTTAGGTATAGCTAAGCTCACTGTCATTT
TCTTTTCAGAACTGTAGAGCAAGGCCTTCAGGAGGCAGTGTCTACACTGA
TTTGGGCAGCCCCTCGCATGAGCACAGAAGTCCAAGAGTTGAAAGTGGTA
AGGATATTAAAACCATGTACTACTAGTATTCTTTGATATGACTGTAAAAC
ATGATGCTGTGTAGAATGTCAGTTTATATGTTAGTGAAATACACTTAAAC
AGTGACTACAAAACATTTGCAAGCCAGTGCGATAGTACTTGAAAACGCAC
TTCACAGATTGTCCTTTAAATGACTGAGTAAATGAGCAGACCAAAACAGT
TGTCACAATGGTTTGCAACAAGTTCTATTGCACAAGCTGATAAAGATATC
TTTCAATGCTGACTTACAGGTCTCTGACCAACTGTGTGCAAAGTATGGTA
AAGAGTTCGGGAAGCTGTGTCGCAGCAATGAGATTGCCAGTGTCAACGAA
AGGGTAAGTCTAACAAATGGGACCACCATTTGAATTATTCATTAGCAGTG
ATATGGTACAATAGTTGCCACAGAAACTGTTTTGATAATTTTATTATGTT
GATGTACACTCACTTATTAGGACAACAATATTGTTCAGTTTGATATAGAA
GTTTTACTGGTAACTGCCATGTCTACCTATACAGCTGTCTTCAAAAATGT
TCAGCTTAGTGTTTATCTATGAGTGCAAAATGTGACGAAAAAAATGTAAT
AACTGTTGCTGTTGTGTGATTACCTTTATTATAGTTGATGCACAAGATGA
GTGAGCAGGCCCCGCCCCGTATCCTGGTAGAACGGTACCTTATTGAGATT
GCGAAGGCCAACAACGTTCCGTTTGAGCCTGACCCTACTGTTATGATGGT
GAATATATGTTTTTTTTTTTCATTTTGGTCTTCAAACTTTTAGCAATCAA
CATAGCAGCACATAGAATGTAATGTAGACTGTACTGAGTTGTGTTGATTG
TTTGAGCTTTTGTTTATAATTTAACTCAAATCAGCCTGCTGGCCACTTTT
CATTGAGGTCATAAGGGAAGGGGTAAGGGTCAGACAATATTTTCACAAAT
ATTCCCATATATAGGCGCAACAGATACAGTTAAGTTTTTTGTAACAGATT
TGTTTTGATTTGACAGCCATAGTTTCATACATTCAAAAACTACAAATGAA
AAGCTTCTTTATGAACTTTTTGTTCTCTTATGAAACCAAACTATAATGTA
AATTCTGTCTTAGAAGTATTATGTATTGTATAACTCTGTGAATATGTTGT
ATTGAATGGCTGTTTTGGTTTTGGCTATAGGATGCAGAAATCCCCATGTC
AGCCGATGACCTACTGCTGATAGACATCAACGACAAGAAGGGGCCAGGGG
GTTCTGGAGGCGGCGGTGGTGGTGGTATGCCTGCACCCCCCCTACCTGCA
CAGGGCCCTGCCCCCCAGCCGTTCAACTATCCACCCCCACAGGTATTTCT
GTCATTGAGTATTCAAGTGTAGTGCCCACTAGTGGATTCTGAGCTTGTTA
CTAATGTTAGATAATGCGTCTATCTTTATTTTCCCGTAGGCAAAACTATC
ATTTCATCTTTTTGAATAAAGCTAGCAGTCAATTTGCACTTCAGAAATGT
TGATGTTTGAAATCATACATAAGTTGCATTTATGCTACTGTGCTATTACA
TAAAAGCAACCTCTTATAATAGGGAAAGTTAAGATAGATGCATGAGCAAG
TTTTTCATGCATAGTACAACTTAGAATGGCTTCCAAGGAGATCTACATAT
TTGGTGATGGTTGAGGCAGGGCTACCCCATAAGCTAACATGTCCATGACT
CCACTCAACCCCTCCATGGTTTCATCAAGTTGTGAAGGAATGGGGGAAAA
CAAAAACGTTTTATGAAACATTCTTCAATTACAGGGCACCATTCTTTTAC
ACTAATGGCTATACACAGTACAAATGTATTTACAAAGAGAAATATACTTT
TGTGTCACATTGTGTTCGACTGCTTATCTTGTGGTCTCAATTATCATAGA
CTTCATGTCAAGAATGAAGATTCATGGACAATTAAGGTTATGATGAAAAT
AGGAAAACCCTTACACACCTTCACCCAACTTGATGAGACCCTAACACATG
TAATGTAATGATGAATACAGGGTCCTAGGATGACACCAGATGACTACCAA
GCCTATCAGAAGGAGCTTGAGGCTGCTGGCAGGCTGGCAGGGCCCTCAGG
CGGCCTTCCCCAGGCACCACAGGTGTGGAGAACGTTAGCAGGGATTTGGG
TGCAGCAGAGCTTAGTGGGCACAGTAGTAGCATATTAACACTAACCAGTT
TTCTTATTTTCTCCCCTCCTCATTTCAACCCTTTGCTTTTACTGTAAATG
TGTTTCAGTTTGTGGTTAAAACAATGGGGTAGGGGGGCAGACAGAACAGG
CATTTTCACAGTGGTTTTTTAAGTTTGCAGGGAAGAGGCCAACTGCAAAA
ACTGCGAACATAAAACCACCACAAACTTAAATGTATTTACAGTATATGAC
AGCTTCCCTTCACCACTAGCAGACATCATTAAGGTTTCCCAGAGATGCAT
AGAACAGAATATCTGCAACCCTGTAGATAAAGTGGCAAAGGCGTTATCTG
TCAATCATTTTTTGTGTGCTCATTATTGATAGAAATGTGTGTTCAATTTC
AACATGGGACAATTTACATATCAAAAACTGTGATCCAACCGCTGAAAGTA
ACATCAGTTGTGAATCGTTTGCATACAACAAGTACAAAATCATCAACTCA
ATATTAACAATGCAAGTCTTAATCTGAATGGTCTAATCAACATAGTCAAT
GATGCTCATTGGTTTGCAATTTGTAGAATAAACTGAGTCAAATGTTGAAA
TGTCCCTTATTATGTTAAGTACAGGGTGTATTGCATTGAATGTCTTTCTA
ACAGCACTACTCCATTTATTGTACAAGCCTGGCTTGCTATATGGAGACCT
GTCCCAGGTAGACCCATATCTAGATCTCTAAATCACATAGGAAGAACTCA
TTTGGCTCAAATATGTGATTTACTTTAAAAAATACACATGTAGTACAGGT
GCATCAATTTGAATTGCACTGCTGAATTTTTTGTTGCAGCCAATGATACA
AAATACCCTTTCAAGCATAGATGTATCAATGTATCTTCAGCACTTTACAT
CACAAGCCTTCCCTACTGCTAGAACTTAGAGCTCACCCTTTGTAACCCAC
CCACCAACTAACTGCCTCCCTCCCCACCACTACCACAGGGCACAACAAAC
CTGCCCTACCCACCAACCATACCTGGACAGCAAGGCGGTGTAAGTTTTGC
TGCCTAGACTAAAGAAAGATGCATGGAATATGGTAGATGGTGGTCAGTAA
CGCGTGGAAACAAATGTTCAAGTGGGACATGCTAATGTTGATGTTTGGCA
TGTAATAATGATATTTTATTTTTGTTGTTTGAACATCATTCTAAATTTCT
CTTATGATGCAGACTTCACTACAACTATTGACTGTTTTATTATTTTGGCC
TATTTATCCATTGGGGGTATCCATTTAACCCAGCTTTAATTGTTGCCAAA
CGAGTTTTAGTCAGTACATAATCATTGGTTTTGCCCAAAATTCACAAATT
CTTTCATCACACTTTTCATTGTGTGTGCATGTTTTGCTCCCCCACAAACA
CATGCATGTGGCCCAGCTAACCTTATCACAATGTTATTGTCTACCATCTA
CTGTTGTGTGTGTGTGTGTGTGCACTTGTTAGTATGTTGCTTAGAACCAT
AGTGCATGGCTTGCTCTATCACCATAGTGACATATACAGTGCTATGTCTC
ACAGGCGCCTAGTGCCAAGCAGCCTCCTCCACTCCCCACCCAACCACCTG
TCGGCAAACCTTCCACACCTGTAAGTCCATAGTACGCTGTGAAGTGCTTG
AAGTGGTGGATGTTTTTTTTTACATTTTTCTGAATCATGCTTAAAGTGGT
GGAGGTTTTTTTTTACATTTTTCTGAATCATTTTAGATATAGAGGAATAA
AATTGAATCTTTACTACTGGATTAATACATTTGTAAACTCAGAAATTTCA
AGCGCCCGTCTGGCAGCTTTTTAATCATTTTCAATGAAAGCTTTTTTTCA
ATCAATTTTAGATAGAGGTATAGATACTCATAATCAATTGGCCTTGGCTA
ATGCATTGTTTTTTTATACCTCTAATCAAGGACATACAAATGTATAATGT
CCTTGCTCAAAACAAAGCTTCTCACATCATATCAAAGCATTTTACAGTTG
CTTCATCATCATGCTTATGTGCTCAATGTGGTACAACTGCAACTATTAAA
TCAGCTTGAGAAAAGCAGCAACTCTTAATCTTTTCTAAGTTTGAGAAAAT
GTTACATTTAGATGTAGAACTTGTTACCTTCTTTCTTCAGGCACCACCAT
ACAACACAGTGGCCAACGATCCTGCGTATCCACCACCGAATGCTGCCGCG
TACATTCCACCAGCCAACCCGAACATGCCCATGCCACCTGCACCAAGTGC
TCCGCCCACAAACATGGACAGTCTACCGGACTTACCGTGTGTCCCGTCAA
ACAGCTTCCCCAACCCGGGGAACACGATTGGTGGGGCGTCTGCCGGGGGT
GACGATGTAGACTTTGATGATCTAACGCGCAGGTTTGAGGAGTTGAAAAA
CAAGAAGTAAATTGTCAAGCTCGCAATAAAGACCTGAGAAATCTGTTAGA
AGAGATTCTTATACGCAAAGCTAAAGCAAATTTGTACAGAATGTAGACAA
CATATGATGTTTTTCAGCGTTCACACATTATACAATACAAATGTATTATG
TAAGCAAATACAGCTATGTGTAGTTAGTTTTGATATGATCTTTGATATAG
TATGGTGGGTTCTATCATGGCATTGCTATTGAATAGGTTTAGGTTGCTGG
AAATTAAAGAATTTGCATTGTTTTTCAAAAGTACTGGAATATAGGGATGA
TATACTACATGTAATTGAGCTGGTAGGCATAAGTTGGCAGATGTAGAAAG
TTGGAATAAGCCACTGTTTTTTGTACAGGAAGACAATTTACTGTTTAGAT
ACTAGTAGTGTGTTTACATTATGCCTGTAACTAGTGTAAGATGCAGATGC
TAAATGCAGTTACATGTTTTTCAGCATTGAACTATCCAGTCCCTGGGAAT
AAACAATTATTGTGGTGATTGTAATATTTACCTTTTGTGTAAGTAAAATA
GGGTGAAAAGTAACTGCACATGTATTATTGTTCAATGGGTACCATATCCT
CTACATGTTTGGATTTCCACTTGTACAAAATATGTGCTACCCTTCTTTTA
GAGATTGATATATTTTGCTTCTATAATCTGAACAAAATTGAAACAAGAAT
GTACTGTTTTGTGTGTGTTTCATTTTCAGTAGTATCTTGTGCAGATATTG
TGTAGATAACTACTGTTAGGTACAGATTATTTTGTATTCCTCAATTGGGG
ATATAAGGCTCAAGCTCTCTTTGAATAATATATATTGCACAGAAGGCAAT
AAATTGAAAGTTGCACCCAACCTAGTGATGATTTCTGGTGACAAAATGTG
GGAAATACATGTAACAATTGCACCAGGTGCACTTAGCAACTGATTTACCC
TATTTATGTAACAAAATGTATGCAGATACATGGGTACCTGTATGTGGTTT
ACCCATGGGATGTTTATTTGAGATCTTTTGGTATACTACATGTAGGTGAT
CACTATTACTGACATCATGTGAAGTACTATATTAAATTGCCAGTTATTTC
ATACACCTCCTCACAATTAAAGACTGCAGAGCAAATCTTGATATCTTTGA
AATTTTATTGAAGCTGTATCATATGTTGATGACAGACAGAATCTCCAAAC
ATATCAAGTACTGACCATTTCTTGTTCTATCTTTTCCCAAAGTCATTCCT
TTTAGTCATTATGCAAAAACTACAATACCTGCAGCAACATTTCAAATCAT
ATGTACAATCCTTCACCTTTGCATGAATGTGTATGTCATGTCTGAGAGTT
TCAGAACGATACATCATTGATATTCAATGGACACAGTACACATCTGCTAC
TTTTATCCTTAACATCTAACACTCTACAGTTGCATCAAATTTCTAATGGT
GAACCAGGTTAAGAGTCTAGAAGAAGAAAACGAACGACTTCACCAGGTGT
CGTATTCAA Coding sequence (CDS) from alignment at Sc0000168:97915..105523- >Blg01680.1 ID=Blg01680.1|Name=Blg01680.1|organism=Branchiostoma lanceolatum|type=CDS|length=936bp|location=Sequence derived from alignment at Sc0000168:97915..105523- (Branchiostoma lanceolatum)
ATGGAGTTGATCGAGATGTACTGTGATCTGCTTCTTGCCCGATTTGGTCT
TATCGAGAGCATGAAAACTGTAGAGCAAGGCCTTCAGGAGGCAGTGTCTA
CACTGATTTGGGCAGCCCCTCGCATGAGCACAGAAGTCCAAGAGTTGAAA
GTGGTCTCTGACCAACTGTGTGCAAAGTATGGTAAAGAGTTCGGGAAGCT
GTGTCGCAGCAATGAGATTGCCAGTGTCAACGAAAGGTTGATGCACAAGA
TGAGTGAGCAGGCCCCGCCCCGTATCCTGGTAGAACGGTACCTTATTGAG
ATTGCGAAGGCCAACAACGTTCCGTTTGAGCCTGACCCTACTGTTATGAT
GGATGCAGAAATCCCCATGTCAGCCGATGACCTACTGCTGATAGACATCA
ACGACAAGAAGGGGCCAGGGGGTTCTGGAGGCGGCGGTGGTGGTGGTATG
CCTGCACCCCCCCTACCTGCACAGGGCCCTGCCCCCCAGCCGTTCAACTA
TCCACCCCCACAGGGTCCTAGGATGACACCAGATGACTACCAAGCCTATC
AGAAGGAGCTTGAGGCTGCTGGCAGGCTGGCAGGGCCCTCAGGCGGCCTT
CCCCAGGCACCACAGGGCACAACAAACCTGCCCTACCCACCAACCATACC
TGGACAGCAAGGCGGTGCACCACCATACAACACAGTGGCCAACGATCCTG
CGTATCCACCACCGAATGCTGCCGCGTACATTCCACCAGCCAACCCGAAC
ATGCCCATGCCACCTGCACCAAGTGCTCCGCCCACAAACATGGACAGTCT
ACCGGACTTACCGTGTGTCCCGTCAAACAGCTTCCCCAACCCGGGGAACA
CGATTGGTGGGGCGTCTGCCGGGGGTGACGATGTAGACTTTGATGATCTA
ACGCGCAGGTTTGAGGAGTTGAAAAACAAGAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01680.1-exon-Sc0000168-1570713199:104658..105523 | Blg01680.1-exon-Sc0000168-1570713199:104658..105523 | Branchiostoma lanceolatum | exon |
| Blg01680.1-exon-Sc0000168-1570713199:104215..104318 | Blg01680.1-exon-Sc0000168-1570713199:104215..104318 | Branchiostoma lanceolatum | exon |
| Blg01680.1-exon-Sc0000168-1570713199:103977..104064 | Blg01680.1-exon-Sc0000168-1570713199:103977..104064 | Branchiostoma lanceolatum | exon |
| Blg01680.1-exon-Sc0000168-1570713199:103621..103704 | Blg01680.1-exon-Sc0000168-1570713199:103621..103704 | Branchiostoma lanceolatum | exon |
| Blg01680.1-exon-Sc0000168-1570713199:103226..103339 | Blg01680.1-exon-Sc0000168-1570713199:103226..103339 | Branchiostoma lanceolatum | exon |
| Blg01680.1-exon-Sc0000168-1570713199:102632..102793 | Blg01680.1-exon-Sc0000168-1570713199:102632..102793 | Branchiostoma lanceolatum | exon |
| Blg01680.1-exon-Sc0000168-1570713199:101852..101953 | Blg01680.1-exon-Sc0000168-1570713199:101852..101953 | Branchiostoma lanceolatum | exon |
| Blg01680.1-exon-Sc0000168-1570713199:100785..100835 | Blg01680.1-exon-Sc0000168-1570713199:100785..100835 | Branchiostoma lanceolatum | exon |
| Blg01680.1-exon-Sc0000168-1570713199:97915..99683 | Blg01680.1-exon-Sc0000168-1570713199:97915..99683 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000168 | genome | Sc0000168:97915..105523 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01680 |
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