Blg01719.2 (mRNA) - B. lanceolatum

Overview
NameBlg01719.2
Unique NameBlg01719.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000261:332086..341955-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01719.2 ID=Blg01719.2|Name=Blg01719.2|organism=Branchiostoma lanceolatum|type=mRNA|length=9870bp|location=Sequence derived from alignment at Sc0000261:332086..341955- (Branchiostoma lanceolatum)
CGTCACCAGATGTATTTACATAATTATCGTCAGCTGACTTTGATCACGTT ACATTCCGGCGCGCTGATTGGTTGTTCGTCGAGTTAATTCCCGGGGTCAG ATGTTGATCAGCAGGGAATGACGTAGCAGGGAAAACAAGCCCTGCCTGCC AGCGATTCCAGGGGGGACAATTTCGACAGATTTTCGTCAATTTTTGGTCT ATTTTGTCCCAGTGACGCCGAATTGAGATGGCGGAGACATCCAGAGAGCT GTCGGACGACAACAGCTGTTTGAACGGTGAGTATTTAGTACGTTTCGGCT TGTAAACAGACAGGATATGTGCACAAGAACTAGTTCTTAGGACGCAAGTC TAGACGTATCTCTCAGCTAGCTGCATCTTAAATCTTGCTCAGGCCAGGGT GGACAGAAAATTATGGACGCTTGATTGGAGCCCTGAGGGCTCTTCTATGG TAAATGGCCATACCTGCTTATCTGTGACGTGACACTGGAAAAATAGATTT TAATTGCTGTTATTTTCACGGCCTTTCAAACACCGGAAACACCCGAAAAG GGCCTCTTTCAAAATGTAAACAAACTGGGAAGTGCGCCAGTTTTCAGTCT TTAAAGGTCTGTTTATTAGTGTCATACGTGTAAGATGATGCAACCCTTGT TCTTATGTTTTTGTAAAAATATCCAGTAAATAAAATCTAAGGGTAGCGAT ACACAAAATATGTTGTTGTTATGTTAAAAATATAACGTTATCTCCACACT AAAGTTGTTTTTATTGAACCGACATCCTGTACTAGTGCAGAATGNCCTGT TCTAGTGCAGAATGTACTAAGATGTGTTTTTGTCGTGTCACCACAAACCA ATTTGCTCATGTAAGCAAGATCGAATGATAAATATTGATTTCCGTACCAT TTGTAAAATTGATATGACACAGAAGATTACAATGTAACGTTACATTGTTG TTGTGTGGATTTTAAAACCAGTGACACGTTTATTCCACAAACAAATACAT TAGTACAGATTTCCTATTTATGCTAGATTGATGATGACATGAACATTCTG GACGGGAATTCCTGATGTTAAATCTATTTTACACGTATTTACATCTTTAC ATTATGGAGCATGTTTGACATAAAATCAAAAAGCATTGCATTAGTTTGAG AATATTTCTAGTATTAGTATGATCTTGGTATGATGCTGTAGTTACTTCCT CGATCCCCCATGATATTGTTAACTTTAGACATTCATTGTCAGTGACAGTC ACACGTAACAGTATGACTATCTATGGAGTCTACTTTTTACTTATAGCCCT GGAAAGTTTGACACATAAGTTATGGTCAGAGATACATAGAAGTGTGCCCT GAGGAAAGCGTCTCTAGATCTCTCCATGGTTCACTGCTTGAAGCCACGCC CTTACCTCAACCTGATCAGGAGAGGGACTGGACACAGAAGCCCTCAGGGG AAAGAAGGGTGACAGCCAGCAGCTGGACACCAGAATTTAGAATAACACAA TGAGAAAACAAAACCCCCAATTTTTAAGTGCTGAATTTCACATCAAACAT CTCTCTGAAGTCTATAATAAAGAGAATTCAGACTCTACAACTGGATAAGA ATCCACAAACGTATCTCTCTGAAGTAGATTGTTTTTATAGTACTCTTACT GTAAATCTTGAAATGTTTGCGGTGGTTTTATTTTCCCAGACCTCTTCACA ACAAAAACATAACACCGCAAATATGCGTTTCCATTGTAGTACTATTGAAT CAAACTGTAACGTTGGGTAACATAAATTCGCGGGGTACTTAAATTCGCGA TTTTTAGAAAACGGGGTATTTAGGGATATGTGCTAGATGCAACATAAGTA ATACCGCTAGAAATGCAAACCTGACAGACTTACGTATTCAGAACACTGTC TGAAAAGCTTCGATAAGCATGGATTCTAAGGCGACGAGGTCAAAAACTCT CCGTCCCTTATTGGAACAGTCTGGGGGCTTCGTGGGAGAATTACACAACA TGGTTGTCGGCTGGTTTATAAGAAAAATGTCACATCCGCTTCCTGCTAAA CACAATTATTTACAAGACAACTTATTACAATCTCTTTTGCTAACCTGCAA CTGGATTCTAAGTGTGATCAATCATCAAAACTCCTCTCTGTTGCTACAAC CTACGGCACGTGTATTTTCCCGCCGCCATATTGTTAACCAGAATCCTGTT GTCAAGCAGACGACAAAGGTTTGTGAGGAACACTTTTTTGTCTAAATGCT GCGTGTGATAGTGGACTGAGGAAGATATTTTCCTCAAAGTTTGCTCCTAA CACAACAAGGAACACATGGACATAGTAGTATTACCATTGCTACGGCATCC AGCTAACTTCCCATGAATAATGTAACGTTACACGTTGCCCGATGATGACG ATGGGCCGACTTTGAGTGAAGTTCTACCGACTCAACACACGGGTTGTTCC CGAACCGGCCTGATGTGTGCGGTACGGCCGTTTTTTCGTGTATTTTTTTT ACTTGGACACGTCTATATCCATAGCACTCTCCTCAAGCCAAGGATGGAAC GAATAGCTGCTGTATAAAATGTGATTAGCGGTAAGATATTCAAGACGAAT CTTCTCTCCCGAATTAATGTGCCCCCCTGTCCGACAGCACNGTCCGACAG CACCGTCATTGTGCGTGCGGCGGGCGGTAGTTTTAAGTTGAAATATTATG GTGTCAGCACGACTAGAGAAAAAATCTACCATATATATGATTAGTGCAAA GATAGTACATGATACTGACAGAATAATAGAAAAAAAGGATGGTTTATTGT TCTGCTAGATTGATTTCAGTCAACCATTATCGGAAAAATCCCGAATTTAT GTTACCCAACGTTACAACAGAATTGTTTCACCTGTGAATTCAAAACACTG CAAAAACTTAACCCTCCTGCCATGGAGGCACGAAATTAATCCCCGCATAA TAGACTCTAGAACAATTTGCAGTAATTTGACCAGTACCTACATGTTCATC AGTCATAAAGGTACATGACTAGCTTTCATTCAACGAGAAGTGGCCCACCT GTCACCAGTGATGATTTCAGATGATGCTGAGTTCATTGAAAAATCTATCG GCCCTGACAGGGCTTGAGTCAAGCACATGCAACCAGCAATTTGGTGGGAC ATTTTAAGACTTCAGAAAAATATTTTGCCGTTTGGTTAACTGAATGAATC CCTTGAAATATTCTGTTTGACCAATGTCATTAAACTATCACAGCCGTTGG AATTGATATCAATCACTACAGTCTCCCACAACCTTGGACTGGAGTTCAAC AGTGTAACAGGCGGAGTGACAGTGTACTAGGTGTAACAGGCCATTCCGTG TAATACAACCAGTCCCTGCTGCGCCGCGTGCCTGGGAAGCTGGTGTATTA TGCTGAATGGCTTATACCGGCTAGATAGATACAGATACAGACAGCTTTAA GATAGGAAGTTTGACATCTAGTAGTGAGCAAAGGTATTACCTAAATCAAA TATCCAAAATGCTAGTGCTTGCAGATTTGGAAGCATTATGTTAATGTCGA CATTCCTGTGACAGGTGAAGGCTATTTATGTTGGAAAGATGTCCCATAAG TCTGATAAGACCTATTCAGGCCAGGGTGATACAAAGTCCTTGGCAGGTAT GTAGAACAATGACCTGGAGGCTGGAGTACATTACCTTATTGTGTTTCAAA CTACATTTTGTATTTCATGACTGGTAAATGCATTAACCCCCTTTCCACTA GAGCCTAGTACTCAGTAGTAGCTGCTACCTGGTTGCGACCGCTTTGCGAT TGCTAAGCATGATCCAAACATTTGACAGGTCACTCAACGATAATGAAAAA ATCTATTTACGTTTTGTAAATTGTTTTGTTGTCTTTTAAGTCATACTTTA CATGGAGCATTAAACAGACAATTTGTCAAAGTTTATTTACAATAACCAGT GTTAGTAAGTCACATAGTATGGTATGTAGGTTCTTCCCACTGTAGGTTCT CCCCACTGTGTCTGCCTCTTTTTTTTTGGAAAGGGATACACGTTGGATTT AATTGTGCAAGACAAATGTTTGATTTAATTGTGCAAGACTAGATATATCA TGTCTGCAATTTGGTGTAAGACTATCAAGTAAATCTTGGTAATGTAACAC TGTAAGATGCATACCAACAGCATCAAAGCTGCAAGAGTTCACATTTGACC CTGAGGCCTGTGGAAACTAGGTCAGCTCATTGATCAGTCCCATGATGTTA AGTCTAACTTGACTCCAACTCCAAGGGGCCCAGAAAAGGTAATACAATAT GTAAGTTAAAGAAAAATAAGTTAAAGTCCTCCCCGCACCAGACAGTGCAT AAGGCGGCACCCATCTCCGTTTCGGCAGCCCTGGGCCACACAACTTTGTG CAAGTCACTACTGTACAGCAGGGGGCTACATGTATACGATATGTAAAGCA ACCATCAATCATTGGATTAAACTAAAATTAAAGATGATTACCCAGTCTGC ATTGTTGTTTGAAATGGTTATATACGTTTGAATTTTGCAGTTGGCATTTT GGAGGGTAGCAGAAGGATGTCAGGGGCTGAAAATGAAGGTAAAAGCAATT CTGAAGAAGAAAAGAAGTTTTTGTCTTTTCACAGATTTTAGTTTGCAGTG TTGATTACCTTGGTTTGTGGGTTGTCATGTGACTCCATAGTCAGGTGTTG ACAGTGTGTCCTCCTGCTTTACTATCCTTCAGGCCACAGGAATATAATTC TAACCTGAAGTAGTAAGAATATTGTTTTTGATTAATAACAATTTAGAGAT TTGTTTGTTTTCTATAGGGTATTAGAGGGTGCATTATTGTTGCTTTTACA GGCTGGTCATACCTAACCTGAACATGTATCAACCCAGTAGTCACAAGGTT AATGAACGTAACAGTATGTAAAAGCCTGGTCACATTCATTGTATGATTGT CGTACAATAGCAAACTTTCAGGGCAATATTGGGATTGTCATGCATATGTC TTAGAAACTTCAGCTGTCCTGTTTCCAAAAAAGCTGTCTTAAATCCTTGT TAGCAGTTAAATTGGTCTGTCACCACTTGTTTGAAAATCCTCTGGCAAAA TTGTGCGACAAGCTATGATGAATATGACCACGCTGTATCATTAGATTCTA AGATTGTTGAGGACAGAACTGTAATAGACCGATCACCAAGCGCTGTCCAC CTCCATCAAAACATCTAAATGTCAAAAAAAGAAACATAGAAATACAAAGA TTTGACAGGCACTCTCTCATTGGTCGAACCACTAATTGGCTGGCATTGGT TCGACTGCAAACTTAAAGTTTGATGGACAGTCAGGATTGGTCTATTATGA CTATTATGTGATCTCTCTGTATTACTGTAGACTCAACAACTTGGACATGT ATACTATGTACCAGTATGTAAGAAAAGACTGTTGAAGACAGAACAGTATG AACATGAGGATTTCTGTATTTGTGTAGACTCGTGGGTGGAGCTCCACTAT GCGAACAATGGAGACCAGCAGCAGCAGCAGGGGACCAATGGGAACCTGAC GTCTCCTCACAACGGGAACATGGAGAAGCTGCTGATGGAGGCGCAGCACG AGTCGCCCAGAAACAGCTCCAGGGGCAGCAGGTCAGGGTCTAAAAAATCT TCTTGCCTTTGATGCCCATGGTCTTGATGACGACCATTCTGGCATGTTGA GAAAGTCGTGTTAAGTGTCTTTCCCAAGGGTGCAAGATCGGTGACACAGA AGGATTCGAACCCAGGACCGCTTGGTTCTGAGCTGAACATGCGGCTTTGC GCCACACGACCTCATGTCGTACCTACATGTACTTCTTGTTGAATCTCCTA TTTATCTGTCTAATATCTTACTCTTTACTGGCTGGACATTGTGTCCTTGG GAAAGGCACTTTATACGACTTTCCTCACTCCACCCAGATGTAAAAGGGGA ATGGGCTCCACTTTCCAAGTATACTGTGCCCTAGACACCCCTTGGCCCTA CAGCCTCAAAAAGGCTATGGGACTACCTTTACCTAATAGTATGTGAAACA TATTCCCTCCAGAATAAAGAAGTTTCAGCTTAGTTGTATTTATTCTTCCA CTATACAGCAGCCCCAGAAGTCCCAACAGCCCACCCCTACCAGCGAATGG TAGTGACCATGAAATGGGGAGTCTGAACGGCTCCAATGGACAAAGTGAGA AGTCCCAGGTATGTAAATTAGCTTTATCAAGCTCCAAAGAATGATATTTG TACCAAGTACTATATATCATCATCATCATTGAGTTCCACTCTATGATAGT TCTGTAAAGAGTTCCACTCTATGATAGTTTGAGGAAAATGCAAATTGTTT AACACATCAATCCTGACGTTGTTGTATGGCTTGAATCATAATTTTCTTTC CGTCTCCAGTTTGAGACAGGCAGTAGCAACAGTGCCAGCCTGCCGCCACT GCCAGAGCGGAACACTGCCGAGTGGATCTGGGACTGGTCATCACGGCCCG AGCAAAACCCACCCAAGTAAGGACCCTTTACTCTGTAGTCCTCTAGAGAC TGCGACCTCCCTGCACGCTGTGACCGCTGAGAAACCAAAGAATTCACAGA TCCCTCAACAAGTTTCATAGATAAAGCACAGATTTGTATACACATTATGC GTTTCTTTTAAAATCCTATTTATACATCTTGTATCATATTCCGATTGTGA GATCAGGGGTCACACAAATTTTGGATGCTGTATGGTCGCTATGACTCCTC TGTTCAATACGTACCTGTGAGAGATGGGAGAAAACAGTAAATCAATGTAT ACTATTGGAATGCAGTACTAGCCTTGCCGTCTCTATAAATTCACTTCAGC AAACTAATAAGGTCAAAGTCAAGGCAGGAGGTTTCTCCACAAAGTGTTCT TGAGCAAGCAGAGGGTCAGCAGGCTACGTGCCACCCAGCAACAACAAAGT CATGGACTTTAGAACTGTTTTTCTTTGACGTTTGATGGAAGAAGTTAAAC TATGGTCCTGAGTTAATGTTACTCATTTTCAGGTTGATTTTTACCAGTAA ACCAACATAACTGTAAGGAGTCCCAAAGCAAGTTAGAAGATTCAGCATAA AATCAGCTCAATAAACAGTTTCCACCAGCAGATAATTTATAAGTCACCTC AGGCTACAACTCATTCCAGCGATGTCGCACTACTCTGAGAACTTCATCAT GTGTCACATAGTAAATTTGTGTTGCCCCCCTTCCCTCTACAGACCTTAAA TCTCAAACATCAAGTCACCTAACAATCCCTTTAGTATCCAAAAGGTCATT ATGATTGACTGGCTTCGTAGGTGTCAAATGTAAGAAATGTCCCATAAAAG GACACCATATTTCTTAAGTGTGAAGATTGGGATGCTTGAGTTTCAGTCTA GCTTAGAGTCTGGTAGTGCTGGTCATATAGTGATAGATTGTGTAGCTGTA GTTAATAACGGGGCCATCAGGATGCATTGCCACTGCTCACAGGACTGCCA TCATGATGGTAACATGCATGTTTTCTATCCAAGGTATGTGAAATGTGGAG AAGCAAACAACAATTTTTTTTTCATATTATGGTTGTAACATTGAAACATT TTCAGCTGCAAACCTGGTTTTGAGTCAAAATTTGTGTTTCACTTCCAGTC CTAATCACAAGTGTTTCTAACTTCTTTGATTTTTCATTCAAGTATGAGGA TACTGTGGATTTCTCTTCAAAATGTGTTTGTTCAGAACTTCATGCCATTG CAACTGTGTATTTTGTACATGTATTCAATCATTGATAATATACATTGTGT GTATCCTTCCTGCAGGGACTGGGAGAAGAAACTGAAGCACCCGAAGCACC GGCTGAGCATGAGGCACACCAAGGCTATGAAGAGGTGGGTAGACCCTGAC TCATCTACAGTCAGTCATTCATTATGTTAGCTAAAGACAGTATGTACTCT CAGGGCAATGCTAACTGCTTCTGAACCAGTCAGGAACCGTGATGAGGGGG GATATAAACTCAATCACATTTAGGACCGCACTCTTCACACTGCAGCAGTG ACACCTAGCTGCAGTGTGAAGTAGAAGCAGTCTGTATTACCCCGAAGAAA GTGACAGACGGTAACTGAAACATCAGCTAGGTACGAACACTAAGTCTTGA GTGTGTACAAGGAACTTTGTTATCCAATGACTGACAGTTCTTGTTCCACA CAGTGATGCTGCTGACTTCCTGACTCTGTACTTCAAGGCTCTTGTGATCA GCCACATAGCTGTGCTGGGCATCGGGATTGGCATTGGGTAGGTTGGAAGC TATGTTGTGTTTGTACCGATACTTTCAATGTACTTTTACCTTGTCCAGAT CCCTTATCTATCCACATAGGCCAATACAGTCATAACGCTATACGAAAAAA GAAACTGTACTATCCCTAAATGAGATTTGACGAACGTTAAGTCACAAAGT AGCCTAGAAATATGCAATGTGATATCTAGAATAGTTCCGTTTAGTTATCA CTGTAGAGTATATTTGATATAACAATAATAAAGTAGTAATTATAATTGTG GAATGGTACACCTAGATATTGTTAATTATGTTATCTGTACATTGCCATAC ATTGTCACCGTTGCAATTGTGCAAATAAATCATTCAATTCATATAAAGAT TTTTGCTAACAAATATAGCTGTTTCCATCAAGTTTTTGATCAGTCCTCAA GTTCAAATGAGCTGTTGCTGATTTAACACTTCTGATCAGGTCACATGACA TAAGCTTTGGGTCATTTTCAACTTTTGATAGAAGGGCCAGAAAACCTTTG TGTTCCTTTTAATATTTTCCATATTGTTGTCCCTGCCTAGGATCTACCTC GGCCATCGGCACATCGGCTCCAGCACCTTTTGAAGACACCATCATGCAAA ACAGAAAACATGCAAGTCCGCCAGATAGCTTGCAAAGGACATGTACAGCT TTAACTGTTATGTGACATTCAGGTTTGATGACTTTGACATTGACAAAGCC ACATTAATGTGTAAGATTTTAGGCAATTCTAACATCTGTCAAAAGTGCAG GCATTGTTGTTTTAATTGCATAGCCTACATGAAAATAGAAAGCTTAATAT GAGAAGTCCTTTTGTAATTGATCTAGATCAGTACTACAGGAAAGCTAGAT GAGAAGAAAATTGTATTTGATTTACAGTATTCACGTTAAAGCATTCTGAA AATGAAAATATACAGGACTTGTATTTTTGTTTAATTGCTGTTTTAGTATG CTCTGTCAATGATTGTTAGGTGCCGTTTTAAAGGTCTAAGTATCGTTTTT AGGTTACAACATTGTCATGAACAAGGCTTAGTAGAGAATTCTGTTTTCTT TTGTTTGTTTTAACAATGGCTTTTCCCTGAATTCCCATGAAGGGAAATAG AAATGTATGATTCTCTGTTAGAGCCGTGTACAACATAGATATTAGAGCCG TGTACAACATAGATATTTCAGCTCATGTCATATAGATATGTCAGCTCACC CTCAACTTGTCTGTTTTTGATTTGAAGAAAACGAAGCAGTTGTCCATAAT ATAAAGCTGCTGTGAAAAGGCTGCAAACTTGTCTCACAATTCTCTTCACT GACAGATTGTCTCCCAGTTCCATTTTTCCTCGCCCCTGCAAGCTTGTAGT CCACTGGTGGCCCTTGCAGCTTGCTATGTGCTGTAGAGCTTGTGATAACA ACTTGATATCGATGTGTTGCTACCTATTCTCTACTTGCAAACCTTCAACA TAATGTAACACACTAATGCTTGGACATATTTGTCCCCAAAAGAGTCCACT GTACACAATCGGATGGGGGTCACTTTGTGGAGGCACATTGCACAATAGAC TGATCCTGACTGTCCATCAC

Coding sequence (CDS) from alignment at Sc0000261:332086..341955-

>Blg01719.2 ID=Blg01719.2|Name=Blg01719.2|organism=Branchiostoma lanceolatum|type=CDS|length=465bp|location=Sequence derived from alignment at Sc0000261:332086..341955- (Branchiostoma lanceolatum)
ATGGAGAAGCTGCTGATGGAGGCGCAGCACGAGTCGCCCAGAAACAGCTC
CAGGGGCAGCAGCAGCCCCAGAAGTCCCAACAGCCCACCCCTACCAGCGA
ATGGTAGTGACCATGAAATGGGGAGTCTGAACGGCTCCAATGGACAAAGT
GAGAAGTCCCAGTTTGAGACAGGCAGTAGCAACAGTGCCAGCCTGCCGCC
ACTGCCAGAGCGGAACACTGCCGAGTGGATCTGGGACTGGTCATCACGGC
CCGAGCAAAACCCACCCAAGGACTGGGAGAAGAAACTGAAGCACCCGAAG
CACCGGCTGAGCATGAGGCACACCAAGGCTATGAAGAGTGATGCTGCTGA
CTTCCTGACTCTGTACTTCAAGGCTCTTGTGATCAGCCACATAGCTGTGC
TGGGCATCGGGATTGGCATTGGGATCTACCTCGGCCATCGGCACATCGGC
TCCAGCACCTTTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01719.2-exon-Sc0000261-1570713199:341706..341955Blg01719.2-exon-Sc0000261-1570713199:341706..341955Branchiostoma lanceolatumexon
Blg01719.2-exon-Sc0000261-1570713199:336325..336464Blg01719.2-exon-Sc0000261-1570713199:336325..336464Branchiostoma lanceolatumexon
Blg01719.2-exon-Sc0000261-1570713199:335748..335847Blg01719.2-exon-Sc0000261-1570713199:335748..335847Branchiostoma lanceolatumexon
Blg01719.2-exon-Sc0000261-1570713199:335440..335546Blg01719.2-exon-Sc0000261-1570713199:335440..335546Branchiostoma lanceolatumexon
Blg01719.2-exon-Sc0000261-1570713199:334072..334140Blg01719.2-exon-Sc0000261-1570713199:334072..334140Branchiostoma lanceolatumexon
Blg01719.2-exon-Sc0000261-1570713199:333669..333752Blg01719.2-exon-Sc0000261-1570713199:333669..333752Branchiostoma lanceolatumexon
Blg01719.2-exon-Sc0000261-1570713199:332540..333115Blg01719.2-exon-Sc0000261-1570713199:332540..333115Branchiostoma lanceolatumexon
Blg01719.2-exon-Sc0000261-1570713199:332086..332517Blg01719.2-exon-Sc0000261-1570713199:332086..332517Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01719.2Blg01719.2-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000261genomeSc0000261:332086..341955 -
Properties
Property NameValue
GeneIDBlg01719