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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000098:1027321..1034111+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01743.0 ID=Blg01743.0|Name=Blg01743.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6791bp|location=Sequence derived from alignment at Sc0000098:1027321..1034111+ (Branchiostoma lanceolatum)
ATGCTGGGCTTCAGCTTCGGTGCCATCACGTCAGGAACCCTTTCGGACAG
GTGGGACTGTCGTGTTGAGGCTGTTGATACGGAGATCTGTTCCGTTTAGC
AATAGATGACGACATGTACATGTATGAACACAGGGCACGTGTGTTAAGCA
CTGAGTGCGCCTACCATGCATAAAAAACTGAATAATAAGATAAATAAATA
CCATATTGGTGAGCATAAAATTTTGATTTTCAGATTTTCCTTATGAGATC
ATTCAATGAGCGAATCGACTACAGACATCCATATTTGCCAAGATGAAAAT
ATGAAGAAACGCACTGAGTCTGACCGAACCCATCATAAGAATTTAATATT
GATGACGCGAGGATCAACTTTCATTACTTAGGTACGGCAGGCGTCCAACG
CTTCTATGGTGCATCTTCCTCCTGGTGGCGTTCAGTGTGACGTCAGCTTT
CTCGCCCAACTACATCGTCTTCGTCATCCTGAAGTTTCTACTCGGAGCAG
TCAACGTGTCCATCTACTACACAGCCTTTGTGCTAGGTACATGTAGATCT
TTTTAAACGGCCAAGTTGTCCAAGAATGTACTTGGAAGATATAATGTTTT
GACATTAAACTTCTTATAAGGTTGGATAGATAGGACATTTGTATTGTGGA
GAAAGCAACATACATCTGCTGATTTGGATTTGGGACAACAGTACCGACTT
TATACAATATGCCTATCAAATCATCCATGGCTATTTGGTTAGTCTCTCTC
TCAATATAATGTTTACATTTCTATCCCTACCGATACTGCATTTTGATCTT
CTTAGCAACTTCAGACGAAATCCGGGCGTCATTATGTTTGTTTCCTTGCG
CAGGTATGGAGGTTTTGGACCACTCCAAGCACACGATGTTTGGGATGTCC
ATGTACCTGTTTCTGGTCCTGGGGTACATCGTACTTGGTGCCTTGGCTTA
CGTCATCAGGGACTGGTGGAAACTACAGCTGGCGATTTCAGCTCCTTTTC
TACTCTGCCTGAGCTACTGGTGGTAAACAGGTTATTTATTGTGACAGTTA
TAAAACGGAAGCTGCAAATACATCAAATACATATAAGCTGCAAATGCATC
GATAACATATACGATTTTACAGGTTGAAAACACCTCAAGATACTACTTTT
TTTAGTTTATAACAAAGTCACACAACCCACTTGATACACACAACGTGGGC
CGTGGGACATTTCATTATAGCCAATGCCAATAATGACCCATCAACAGTGA
TCGATGTACGCGGTTGCCATAGCACACTAGACACGCGCGGTGAATAGTTT
CACCACATTTACAAATCACCGGAGAACAAAGTTCTTTGTACACAACCAGA
GAGAATGCCTAGTCAACGTTTTGATGACCGCCTGTCACCTTCCACGGGGC
CGACACTAGTCACTTTTGTTATTTTTATCCGCACTTTGAACACACTTTTC
ATTGCTCACCAGTAGTCATAGCCTTCGATCATGAACTTTCAAATAAATTC
AAACTATAATTTGAATCATACCGCGACATAGCGAACTAGGGTGCTAACTC
TTTAGTATTAATTTTCTAGAAAGCCTTGAGAGAGTGGTTTGCTGTGTGAT
TATAAACAACAGACCATGACATGCTTTCGTGGTTGACTATGGCCGCGGCT
TTCCATTAAAATATTCCATATTGGAGGACCTTCAAGTCACCTGATCACGT
TTAAAGGTAAAACATTGATACAGAATTCCCTATGGGTAAGGTAAAAGATA
ATTTCTAATGTCTAACAATTCTAAAGAACTTATATGTCTTTGTCAGAAGA
AATGAAACAGCCAGGTATCCAGGTAACGTAATAGAGGATCAGAAGAGATT
GACTGATGAACACATTTTAACGTAAAGGTGAAATGCCTGAAAAATTATTA
TGGATGAATATATCGGTAGCATGTTAGGAAGCGAAGGGTATGGTATCTTT
TTAAACCCCAAAAGATAGGGGAAGTTTATTATGGCTGTTTGGCACTTATA
CCGACTTTGCCGTTAGGTTGTTACCGGAGTCTCCGCGGTGGTTGATTGTT
ACCGGACGGATGAAAGACGCCAAGAGAGTCATCAAACGCGCGGCCAGAAT
GAACGGAGCTGACTTCCCGGACAAACTGTACCGCGAAATGGACTCCAACC
TTATCCAGGTGAGCATGAACACACTCTCATAGAAGTTAAAGAGAGAAACT
TTACCCTAAATTGTATTATGATTTGTATCATGATTTGTGCTATGATTGTT
ATCATTTATTTACTATTGTTATCATTACCTTCATTGTTTTCATTATGATC
ATTACTATTATTTCTATATGTTGGTATTTCTGTTTGTATTATCAGTTATT
TCATGTACGCAGGGCCCCTTTGAAAAGCAGTGGTAACCACTGAGCAGGGC
TACCCTGGATAAATATGACAGAATAGATAAATGAATAAATATCAAACATC
ATCCCCTTCCATTAGAATTGATAGAATTGTTTCTGGACAGGAATGCGAAC
TGATCATGAAATGAAGAACATTTGAATTTAATCTCTTCGTTCCAAGTAAC
GTTAACTCATTGTCGTTTTTGATAATTATATGTTCTAAACTTAATGTGAG
TGACGTCTAGCTATTGTGAGATCTGAGTTGATAATAAATAAAAGTCATTT
TTTATATTTCATGATTATTAGAATCCATCTCAGCTAAAAGTATCTACGTA
TACTAGGAGATAATTGTCAACTCTAGACTACAGCCTGCTCAGTCACTGCC
TGGATCACATAACAGATGTATTTCCCAATAGAACGATGGAAACGACGAAA
AAGGAAGAAGAGAGCACAATCTGCTGGATCTGGTGCGCACACCCAACATC
AGGAAAAATACGCTCATAGTTGGATTAACGTGGTGAGTAAAGAAGAACAC
GTTCTTCGAGTTCTGATCGTCCCCCTGTGTCTGTTGTACAATTCTATTAA
AAAGATCGTGCGCCATGTTCCTGTAAAATTAAGTTTCCTTATTTTAAAAG
CCTTTTCCCTGACATCCCTCGTCATGCTGTTAGATTGTTGTAAATAAACT
AACTATATGCATATTTCGTAAATGACCCCTTTATTTTAGGAAATATGGAT
GTAGAAATCGCCAGTTTCTGTGGACGCTGTCATTTCTTATATTCCCATTC
CAGTGGGAAGGGGGATATACTGTTTTTGCTTGCCTGTTCTTCTTCTTCTT
TCTTCTTCTTTCTTCTTCTTTCTTCTTCTGCCAAAAACCAAATAGATGTG
CGGTGGTAGCTCTACTAATGGTATTGCAGAAAGTTATATGTACCTTATGT
TACATGGTACGGATGTTATATTTGAGATGTAGGTACCTATAGGAAAGGTG
AATACACCTGACAATAAATTATGCTAATGAGGACCTAATTTGCACAATCG
ATGCATAAACTTGTATTTCCCTTACAGTAAAAGCTGCGAATGTCATCTTT
GCGATGTAGGTACCTTTAGGAAAGGTGAACACACCTGGACATAAATTATG
CTAATGAGGACCTCATTTGCATAACTTATGCAGAAACTTGTATTTCCATC
ACCGTAAAAGCTACGGATGTCATCTTTGAGATGTGGGTACCTTCAGGAAA
GGTGAATGCACCTGGACAAAAAATTATGCTAATAAGGCCCTCATTTGCAT
AATTTATGCAGAAACGTGTTTTACCCTTACCGTAAAAGCTGCAGACGTCA
TATTTGAGATGTAGGTACCTATAGGAAAGATGAACACACCAGACCATGAA
ATTATGCTAATGAGGACCCCATTTGCATAATTTGACAATATTTTCCATTG
AATAGATGGAGTATGATGCGTACTGCCTTCTCAGAGTCGGGAATTAGCAA
CGTAAAAAGAAATAAAAGTTTTCATGTCCTTTCCAGGTTTGTTATGATAG
CTGTATACTTCGGCCTTTCACTCGGCGCACCAGAGCTCCCTGGCGACCCG
TACGTGAACTTCATCGTGGGTTCCTGCATGGAGATTGTGGCTGTTGTGGT
GGCCTGGTCCACCATGGACAGATGGGGGAGGAAGCCTCCTGTTATAGCGG
CCTTCATTGTCGCAGGAATAAGCTGTGGAGCCACTGCTGTTGTGCCAAAA
GGTATTGAGAGTCTACGTTTCTAGAATTCTGTAAATAATACCAAGCCGTA
TTCAAGCCAAGAACGATAGTTAGAGAAGACACAACCACAGGGTGAAAGAT
CCTATCTGCGAAAAATACATCGAAAACAGAAACAGCGATATCTTTTAAAC
GCAACTTTATATAATTTTAGATAGCTAAACAGCTTTGGTTGTGTGTATCT
ATGGGTAACGGTGCCATGTGTACATAATTTGTCAACTATTCTTTCTTAGA
ACTGTGGCAAGTGTCCACCGGCTTATCCATGGTGGGGAAGCTTGGTGTCA
GCGTTACGTACGCGGTTTTCCCGGTGTACTCAGCAGAAGTCTTCCCAACA
GTTGTCAGGTTCGTGAACTATTCGGAAACATGATAGGGTTTTAAATTTCG
GTTGTGTGGCACTGGTACATTAGCAAGTCTAACTAGACTGGCCATGGGCT
AAAAATGACGCGTTTCATTCAATGTATTCAGAGATTCTAATATCTCGCAA
ACAATTTACTGTAGCACTTCGAGAATTACGGATACGTCATAGCACTACAC
TCCTTTGATTCTCAAATTAGTATGCAATGTATGCCCTGCTTGGGGATTCC
AGAAAATGAGCATTGCTTTCCCTCAAAATGTTATGATGTCTGTCAATTGT
AACCATTTAAAAACAAACGTACTGGAATATATATTGATATAGTGTATGTG
TACATATATATATATGTATGTATGTATGTATGTATGTATGTATGTATGTA
TGTATGTATGTATTTACGTTTGTGCGTATGTATGTTTGTATGTATAGAAA
AAACGTATTTCTTATATGTTTTCTTTCGTAGAAATATGGGAATCGGGGTG
GTCTCTATGATAGGCCGAGCTGGCGGGATCCTCGCCCCGTTCGTGGCTCT
GTTCGGGGAGTACTGGGCCCCCCTCCCCCTCCTCACCTTCGGCATCCTGA
GCTTCCTGGACGGGGTCGCCATCTTGGCTCTACCCGAAACACTGGGCGTC
CCGCTACCTAACACACTGGAGGATGCTGAGAACTTGAATAGGTATTACTC
ACTCCTGTACTATTTTTTACATGAAATTCAGTTTCGTCTCATCGTTCTAT
TAGAATACAAACTTATCGTCTAGCCACTTGTATTTTTACCAAAGAGTAGT
AGCCTGCATTAATGTCTAGAGACATTTCTTTGTTTTGTTGGTGGTGGAAT
CGATGGACTGTTGCCAAACATGGCTAAGTACGTATACGACGTTGCAGGTT
TTTAGTTAGACATTATACATTACAGATGAATCTGGTAGCATTTTTAAGTT
AAATGCCAGTGTTGGAAATACTTACATAAGTCAGTATGTGTATTTTACCA
GAGAGCAAAGGTCCATTAGGTGCAAACTATATATAGTCAGTATCTATCCT
TGGTACTGGGTATGCCAGTTTGTATGCACTGTTGATATGCTGAAAAGCAA
CGCTACTGTATGTGCACTGCAACGCTAGATATACATAGTATCTGTCCTTG
GTGCTAAATATGACATCTGTATGCACTGTTAGGATGCTAAAAAGCAATGG
TACAATATTTCAGTGAATGGTTCTGACAGTATTTTCACAGTGCGAGAGGC
AAATGATAATGAATGGGGAAATTCTGTAATTCTAGTGTTTTCCATAATGG
GACATTGATACATGTAGCATATGTAATGTAAGGTAGGTGGAACATCAGTA
GATACAATATATGCAAATATGGTCCTAATTTGCATAAATGTTTCAATGTT
TAAGTTATTACCCTATGCTAGCTAACCACCTACCAAGCGCAGCCGTTGTT
CACTTTACTATAATCTAGTAATTCATTTACTCCATCTGCCTCCGGCCCCG
AACCAATAAACTGAAGTCACAAACCTGTTTTGACCTCAAGTAACCTAGCT
CAAAGCAAATATATCCTTACAAGCACATCGCTAAGACAACATCAGGCTCC
AATGTGCCATTTGCTCAATAGCTGAACAGCAAATACGTTTGTGTTCAGCC
CCTGTCACTGAGCAGATCGCCGTGTCAGCAGTAGCCTACGTTATCTTGTA
GGTAATACGCAGATAGCAACTGGACACAAAGTGACAGTACACGTGACAGC
TGGGGCGCTGATTAGCATACATTACTTATGCATCTCTAGGGACAGCCAGA
CAGAATCAAAGTGCACAAGTTACAAAATTGCATCAGATTCTGTATCTCTT
GATGTGAATGTTTACAGGACACATTTTTTCCATAGACTGGTAGCATGTAA
TTGTTTCTAGAGATCTTTCATTGCGTGTGTTGGCGGTGGAATCATCAATA
AAACTGAGTCTATAGCTAAACATGGCTAAGTACGGCATTCTTGCAGCTTT
ATAGTTGATTACTATTCAGATGAATCTCGTTAAATGTCAATATCAGAAAT
ACTTACAAAAGTCAATATGGTTATTTAATTTCGGCATCATCATATGGAGA
AAAGCTCAAGTAGGTGTCTACTTTATACAACCAGTATCTGTTCTTGGTGC
TGACATTTGTTTGCACTGTTAAGATGCTAAAAAGCTATGCAACAGTATTT
CAGCGTATCCATGGCTAACAATAGTGCTGTTTGTTTTTCAGCGTTAGAGG
CAAGAGTTCAGAGAACTCGGAAAAGATCTTGCCAGACGCGTTCCAGAAGA
CTGAGGAGACTGAGATCTATGATAGGATCACAGTTTTGTGA Coding sequence (CDS) from alignment at Sc0000098:1027321..1034111+ >Blg01743.0 ID=Blg01743.0|Name=Blg01743.0|organism=Branchiostoma lanceolatum|type=CDS|length=1251bp|location=Sequence derived from alignment at Sc0000098:1027321..1034111+ (Branchiostoma lanceolatum)
ATGCTGGGCTTCAGCTTCGGTGCCATCACGTCAGGAACCCTTTCGGACAG
GTACGGCAGGCGTCCAACGCTTCTATGGTGCATCTTCCTCCTGGTGGCGT
TCAGTGTGACGTCAGCTTTCTCGCCCAACTACATCGTCTTCGTCATCCTG
AAGTTTCTACTCGGAGCAGTCAACGTGTCCATCTACTACACAGCCTTTGT
GCTAGGTATGGAGGTTTTGGACCACTCCAAGCACACGATGTTTGGGATGT
CCATGTACCTGTTTCTGGTCCTGGGGTACATCGTACTTGGTGCCTTGGCT
TACGTCATCAGGGACTGGTGGAAACTACAGCTGGCGATTTCAGCTCCTTT
TCTACTCTGCCTGAGCTACTGGTGGTTGTTACCGGAGTCTCCGCGGTGGT
TGATTGTTACCGGACGGATGAAAGACGCCAAGAGAGTCATCAAACGCGCG
GCCAGAATGAACGGAGCTGACTTCCCGGACAAACTGTACCGCGAAATGGA
CTCCAACCTTATCCAGAACGATGGAAACGACGAAAAAGGAAGAAGAGAGC
ACAATCTGCTGGATCTGGTGCGCACACCCAACATCAGGAAAAATACGCTC
ATAGTTGGATTAACGTGGTTTGTTATGATAGCTGTATACTTCGGCCTTTC
ACTCGGCGCACCAGAGCTCCCTGGCGACCCGTACGTGAACTTCATCGTGG
GTTCCTGCATGGAGATTGTGGCTGTTGTGGTGGCCTGGTCCACCATGGAC
AGATGGGGGAGGAAGCCTCCTGTTATAGCGGCCTTCATTGTCGCAGGAAT
AAGCTGTGGAGCCACTGCTGTTGTGCCAAAAGAACTGTGGCAAGTGTCCA
CCGGCTTATCCATGGTGGGGAAGCTTGGTGTCAGCGTTACGTACGCGGTT
TTCCCGGTGTACTCAGCAGAAGTCTTCCCAACAGTTGTCAGAAATATGGG
AATCGGGGTGGTCTCTATGATAGGCCGAGCTGGCGGGATCCTCGCCCCGT
TCGTGGCTCTGTTCGGGGAGTACTGGGCCCCCCTCCCCCTCCTCACCTTC
GGCATCCTGAGCTTCCTGGACGGGGTCGCCATCTTGGCTCTACCCGAAAC
ACTGGGCGTCCCGCTACCTAACACACTGGAGGATGCTGAGAACTTGAATA
GCGTTAGAGGCAAGAGTTCAGAGAACTCGGAAAAGATCTTGCCAGACGCG
TTCCAGAAGACTGAGGAGACTGAGATCTATGATAGGATCACAGTTTTGTG
A
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01743.0-exon-Sc0000098-1570713199:1027321..1027370 | Blg01743.0-exon-Sc0000098-1570713199:1027321..1027370 | Branchiostoma lanceolatum | exon |
| Blg01743.0-exon-Sc0000098-1570713199:1027702..1027856 | Blg01743.0-exon-Sc0000098-1570713199:1027702..1027856 | Branchiostoma lanceolatum | exon |
| Blg01743.0-exon-Sc0000098-1570713199:1028174..1028342 | Blg01743.0-exon-Sc0000098-1570713199:1028174..1028342 | Branchiostoma lanceolatum | exon |
| Blg01743.0-exon-Sc0000098-1570713199:1029337..1029478 | Blg01743.0-exon-Sc0000098-1570713199:1029337..1029478 | Branchiostoma lanceolatum | exon |
| Blg01743.0-exon-Sc0000098-1570713199:1030102..1030202 | Blg01743.0-exon-Sc0000098-1570713199:1030102..1030202 | Branchiostoma lanceolatum | exon |
| Blg01743.0-exon-Sc0000098-1570713199:1031207..1031421 | Blg01743.0-exon-Sc0000098-1570713199:1031207..1031421 | Branchiostoma lanceolatum | exon |
| Blg01743.0-exon-Sc0000098-1570713199:1031670..1031778 | Blg01743.0-exon-Sc0000098-1570713199:1031670..1031778 | Branchiostoma lanceolatum | exon |
| Blg01743.0-exon-Sc0000098-1570713199:1032252..1032461 | Blg01743.0-exon-Sc0000098-1570713199:1032252..1032461 | Branchiostoma lanceolatum | exon |
| Blg01743.0-exon-Sc0000098-1570713199:1034012..1034111 | Blg01743.0-exon-Sc0000098-1570713199:1034012..1034111 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000098 | genome | Sc0000098:1027321..1034111 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01743 |
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