|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000098:680341..687556- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01746.4 ID=Blg01746.4|Name=Blg01746.4|organism=Branchiostoma lanceolatum|type=mRNA|length=7216bp|location=Sequence derived from alignment at Sc0000098:680341..687556- (Branchiostoma lanceolatum)
GAAACACATACATGTATCTTCCGCCATTTGTGAGATAAAATAAGTGAACG
TGAATGGTCAGTTTGCGTGCGTCTTGGCGACACAAGTCGACATGGAGGCT
TAAGCTTCCAGCAGACCATAAGAGTACTGTGGGGATATGTAAACATATGT
CTGCAATGTGGTGATGTTGTGACAGCATTTAGGTGTGTTCCTGACATTTC
CGAACGGAAAACAGAGGGAACCCACGACTCCCAGATGGCGCACCTCATGA
CTACAGCTCCACCCACATTTTTACAGTGTTTCATAAACAAGGCTGAACTC
TTACAGAGCAGGTATACTTTTCTTACAGAGGGGACCAAACCAAAAACAGG
CCAGACGTTCACTAAGCTTAAGGTTCACAGAACAACGACGAAACCATGCA
GGTCCTGAGTGTAGCCGCCATTCTGATGTTCCTGACAGGGAGCTTTGGCT
CCACCGATCTGTCACAAGAACAGATCAACACCATCTTACAGGCGCACAAC
AACTACAGGAAAGCCGTCAACCCTACAGCTGCCAACATGGAGTATATGGT
GAGGCCTTTTCTTGTCTTTCATCGTTACTTTCTCTTCGGTGTACAATTAC
GCCCATCCTAATCTATACTAAAGCACCTGTGAGGTTAACATGTAAGAGAT
AGTCCGACAATAGGTGATTAAAAAATTCCTGCATACGTTTAAGCACGCGA
TATTTTGTACACCAGCTTTTGATAATTACAATACGGGATGGGGCTGTACA
AAGTACATGATTGTACAGACATAATAACAGACTCTAGTGTAACTAATACG
GACCGGACCCAACTCGACGTATTTCTGCAAAGGTCATTCGTATACAGCAT
TATCAAATGATTACGTTTTGCCAATCGAGCTTAAAGATCAACTCAGTAGT
TTGAAAGTTTGCGCGGAGCTAGCTTGACTAAGTAAAGGTGACCTAACCAC
TTATGTATGTCCCTGTAACACTCCTGTGATCACAGATCATGGCGTAAGAA
AATAAGACCACAGGGAACACGTTCTTACTTAAAACAAGTACACGTGGTAC
GAGGTCCTGGTAGCACGTAGGTCTTAGAAGAATGGTAATGGAAGCTATCG
AGATGTCATCATTTTCGGGAACTGTTTAAAAAGGGAGACTGTTCGTCCAA
AAAAATGTATTGTCAACATTCCCTGTTTAATAGGAAAATGAATGATTCAA
CTAGATGTAGTTTCGTCTTGAGTGTCCATGTTTGAACCAGGGCCATTCTA
TCAGAGTTGTAACTGGTGCATTAGCATTGCAGACCGCACACTGTGTGCCC
ACTGGGAGTGATCCGATACCAAGAAGTGTTGTTGTAAAACGGGAAGAGCT
TGTTTCCTAAACTAACCCGTGAAGAGTGTTTTTCGGGAAATATCACCCAC
CGCATGTTTCCGAAAGATAACATCTCGTAAAGAAAACTAAGGGCGTTGAT
ATGGTTGGTCAGTTCAAGATGAGGCCATGTTGATTTGATTATATGGATGA
CATCCTCTGGGGACCCCAAAACTGGTGCGAGCGTGCAAATAAAAAAAAAG
TTTGGTAAAAAAAAAAGTTGCCTTCATTATGAAATCTACGTTGTCAGGAA
GGATAAACAAAGTAAACACACCGAGTATGGTAGACCGAAATATAGATTCT
TCATTTTTGTTCCTTCAAAACTTCTTCTTGGGCTTTGGAATTGACGTCGG
CAATCTACGACATTAGTATCCGTTTTCTGAAATATGTTTTTGCAATTCAT
AGCATGTATTTTCTCATTTTGCAACTGCCTTTTACGATTTTAAGTATGGC
CGAAAACTTTTATTTTGGGAAACGGACGAAAATTGACGCCCGCGCGAATG
TCACCCATATAATTAAATCAACATGGCCTGACTTTGAAAAAGAGCCTGGT
GCAAAAACACAAACATCACCGTATATATGAGAATGAGATGCATCGCCCGT
ATGTGACACTGCCCAAATCTAAAGTATGTCGACGGTCCAACTAATGTTAT
TTTTAACTTGTTTTGAGATGTGTAAAATGTGCCACACATTTTTGTTGTAT
AATGATGTTGAGATATAAAAATTCTACTGTATCATAAAGACAGAATATTA
CGGAAAGTTAATGTTTGAGGTTCGCGGATTCAGTCATGAGTCACGTGAAT
AAAGGCATTGTGTTTAGAGATATACGAGAGACACGAAAGGTTAACTCAAT
GAGCTGTTAATATGATTGAAGCTTGTCACGTATGACACGTCAAAATTTGC
TGTTTGCACGCACTCTGAAAGTCGCCAGCCGCAACTTAACAATGGTGTAC
CTGCTACAAAAGACGGGCTTTCTCTATTGTGCGTAGTGTGAACTGGACTG
CAAGTAAGATCTTCATGATTAAGCGAGTTGATAACTGTTATTATTTTGGC
GTCGCAGTGGAAGTTTGGGTGTTTGGCCCAGAACCCAAACAATTCCAAGT
TCCCGCGACTTAAATTGTCCCTCGGGGTTTGGCACTTGACACGAATTTCC
TCACTTCGCTAAGGTAAACATGAGCACCTAGCTTCGGTTAGGGACGTCCC
TCGGTTAGGACCATAAATGAAGGTCCCGTGTTTGGAAAGAGCCACGCCTC
AAGCACGTAAAAGAACCCACCACACTTGTCGAAAAGAGTAGGGGTCCTTC
CCGGTGTGAGTGGATCAAACCTTACAGTCTGGTCTGGTTTGACATCTTGA
AAATGTGATAGCCACCTGTTATGTCAACCCTTCCACAAATGTGGAAGGGT
TGACTAAATCTCAATAAACAAATGGGTTATGACTATAATCATTATCATCA
CAACTAGCATAGGAATCTTTATCATCACTATTAGTATTAGAAAATACCAT
CATGACTTCTATGTGCCGTATGTCTGTACCTCTAAGGAGTGGGACGATAG
CCTGGCGACCATAGCGCAGGGCTGGGCGGACCGCTGTGACTTCGCACACA
ACCCGAACCCGGCGGCGAACTACGCCGGGTCGTCTGTAGGGGAGAACATC
TACGCCGGCACTGGAAGGTTTGTCACTCTGTGTGTCGACTTTGTACCAAG
TGGCATGGCCCTTCTGACAATAGCTTTAAGTTTTACCCGTACAAAATGCA
ACTTGATCCTGTACAACATTTTAGGCTTGAATGACGACATGTACATAGCA
AGATATCTCATGATGCTAAGAATTGCACAACTACTTCTCCATTATTACTT
GGCCACTATGGAATAAGTGTTGGTATTACATAAAGCGGGTGCCTAGTAAC
ATCTTAAATAAGATATAATCTTAGAAAACAATTGATACACACAAGGTGTA
TTTACTAATATTAAGTGTAAATGTAAGTCGTAGAACAACAGCCAAAAGTG
GCACTCTCACGTGATAGCATCTTCTATATGAGAAATGTTCATCAGACATG
GCAGTGTCTTGATATCTGTTGATTCTCATGTTTTCACGGTAACACACGAC
AAATTCACAGCTACACTGCGGGCAAGGAAACCGAGAACTGGAACGGTGAG
GTGTCTGACTACACGTACAGCAGCAACTCGTGTAGGAGTGGCGCCGTCTG
CGGACATTACACACAGGTACGGCCATACGATGTCCTTCATTCGTGCATGT
GTGAACGTGCGTGCGTGCGTGCGCGCGCGTGCGTGTGTGCGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTATACGTGTGTGTACGT
ATCCCAGTTATGTCATTTTAACCAGGGCTTAAAATGAACGAGGGACCCGG
TAACAAACACCGTGAGCTAATCGTACTAGCACCGGGAGGTACAACTAGCC
AGCCCACACCCGAGAGTCAAAATTTGTGGCTTCGGGCCAGGCCGGGACTA
CAACCCCGACGGGCACCGACGCAATTGGGACCGTAGCATTAGTCAAGATG
TACATATAATATATAACTGCTTCCTCCTGTACACACTTTTACACCGGTAC
CGTTTCGCCTCCCGCCAGGTTGTGTGGGCCACCAGTAACAAGCTTGGGTG
TGGCTGGAAGCTCTGTGGTACTCTCGCCACTGTCAACTGGAACAACGCCA
ACCTAGTGGTCTGTAACTATGCCGCAGCGTAAGTCAGCAGCCTTTTATGG
ACTTGTGGTTTCTCACCCGTCTTTTATCTATTTATTTATCTATTGGTTTG
ACTATTCAGCACACAGAGCCAGGGCTGCCCAACTGGCCTGTTGCTATTAC
AAAGGGCTAGCCCTGCTGACAGAGACAAGACAAGACATTTACAGTGGAAT
TTTTACATAACGAGCTACAACAATATTCTAAGCACATGTACATACAAATT
ATTGTATATAAATGATCTAGAATAACGTCTATAATGGTATCTACGTCGAG
AGGTCAGCTTCAGTGCGTATACATGTAACTGCATTGTAAAGGTTGCCTAA
ACAGTCCCAGAGTTTCCTTTCTTCTAAAGGCGGTTACATTTCTGCAATGG
TGTATCAATATTGACAAAGGATTGGGGTTTCTTTCATGTAATGTATATTA
GCGAACCTTGGCTTATTTTCTTTTCCGTATGTTGTCTGCAGTGGTAATTT
TATTGGACAGAAGCCCTACGTCAGTGGCACACCCTGCACACAGTGTGCGA
ACGGCAACGACAACTGCTCCGACAACTTGTGCGGTAAGGATCAACCATAA
ACAAACAAACAAACAAACAAACAAACCATTTTACAGTAGTTAGTCCAGAT
AGAAACCGCAGCTGGTCAAATGTTTGCTGATAGATTTTGGAAAGACACTT
CATAACCAACACAAAGGTTAATGGCCAGTATGATCTAACGTTATATTTGA
ATTCATAAACCTGTTACGCATCCAGCCGGGATACCTGTAAAAGCATATTT
TACTACAATGTGGTATCGTGCAAGGCAGGTGATTTGATCATTCTTGCACA
TATATATGTGTTGTTCATGTATACATATAGACTTCAAACCTTTGGTTGTA
ACAAAGCCCTGATTATGAGTAAACCTACCTATCCACCCCCTGTTTTCAGG
CAACCCGTCTGGTGGTGCTACCAGTGCCCCCAATGGCAATGGTGCAGGAG
GTAAGTACCAACTGCAAGCCAAGCCTTGTTTTAGAGTCTCCCTTATGCTT
AGGTCCAATTAATAGCGCCGGTGCCCGAAGCCACAAATTTCTCCCGTTGA
ACTGCCGGGTACTGCGGGGTGGGGGTGGGGGTGGGGTTGCGATGAGATTT
ACCTACCGCTGATCGCACGATTAGCCCACGGCGTCTATTGTTATCGGGTC
CCGCGTTGATTTTAACTCCGAGTTAAGATGGTTCGGGGTCCCCGACCGGG
CCCCAGAATGGCCCGGCAGCCGGGACCACGTAGGAGACACGCCCAAAAGT
GGAGAAAAAAAAACAGCCCGTCAACTACCCGGCGGACCCCCTTTTCCAAT
TGGGACCTAAGCCTTTAACAGCTCATTCGACCGGAGAGACTCTAAAATTA
ATGTTGATAACTTATCAGGTTGTAGAACCTGTACACAGGTCGCCCACAGA
GGGGGAAACACTACATCGCTGCCTGTTCTAAGATTGGTCACATGCAAGCA
TGTTTAATTTCTGCGACATGACACTACTAGTAATTCAATATCAAAGATTG
TATAGTTGTTGATGTGTTGTTTTGATTAACCTCAGTATTCTATGGTCATA
ACAATCGTTAATGTGACGCAGAATTGGCCGATGTTGACATCTATCTCATG
CTAGAACTGCAGGATGAATATCTTAGTCCTCTCGATTTTGTTTTGATTGA
TAACTTCCCTTTGGTGTTGTTTTAGGTGGTGCGTCCAATACTACTGACAC
ACCCAACGAGGGTGGAGGTAAGTGGTCAAGGCACAATTCTGTAGGAGAGA
TTGTAATGCACTTTTGATATTGCTTTAGGCAACAAGTACGTATTTATTTA
TTCTTTGCATCAGGCCCAGGGCCAATTTTGAAAGCAGCAAAGGCAATATA
CAGATATTTACATACAACACAGACATTGCATATCAAATACTGTAGAAACA
TGCGGGCGGAAGGACCAGTCGACAATAATAAGGCCAATGCCGGCTCAATG
AAAAGACCTCGGAATGGCATAGCAGGTTAATTATGCTCTGTTCAGACGCA
AAGAATGGAAGTGGGTAGATCTAGAAGAAACAAAACGGCCCGAGTATGTG
ACATATCATACCCTTAGTGTTCGATGCTAGTTTCTTTACATTGTATTGAC
ATTTTGTTACAGATAACGGCGCTACTGCTACTCGCCACTGGAGCATGCTG
CCGCTAGGGGGCGTGATTGTGACGCTACTCATACTCAACATGCCATGATG
AAGACTTGCATCGCATTCGTACATGTGGCCATACATTGCTTTTAAAACGG
AAGGGATTCTCATAACCCCATTGTATTAGAGCATAATCATAATGTATATA
TATAACAAAGGTACTATTTGATGATATCTAAATTTAGTATTCTGTATCTA
TACAGCCGGTACTTCCGCCCTTTGGCGTAACACACCAGCTTCGCACACAC
GTGGCACGGTTGCAGCTGATTACTAGCATATTACATCAAACGACCTGTAA
CATCTAATGTTCGTATATCTAATGGCATACATTCTTTAAAGCGATCGAAT
TAGGATGCATCTACAGTACTAGACGATAACGAGTTCTACCCTACGATAGT
TCCAGAAAATGCGAATTTAAGTTCAACACATCAAGCCTAGGTTGATAAAT
CTGGTACTTGAAGGCATGACTATTTCTTGTTCATTTCTTAGCTGGTATAG
GCATTTATTACTTAGTAGCGTGAAGTTTGTTTATGTGTCACGCGACTGAC
AATAATTTAACAGCAAAGTATACAAACAAAAGGAATAAGATAAAAACATG
GGCAGAGCTGAAACTCGAGAGGCCACGTTATTTCATCTGCTACTTCTTCT
CATCGATCTTTGCATTAATTCATTGGCGTTTGTTAACAGAAGAGATAAAG
GTAGAAATGCTATGTGTTAGGTCACGCAATAAAGATATTTGACTGTCTTT
GAATCGCCCAGAAGGCTTGATTAAGCTAAAATGTCAACAAATTCACTTTC
TTATCTGTTTCATCGTTCAATGTGATATACTTTAGGTTGACTCAATGTCT
AATCACGTTGTAATCTACCTACATAAGCCAACTTTTCATTTCATTTTTGC
CCAGGGTCAACATATCGCTGCTAGGGTGGTTTTCAATGTGCCCTGCAGGC
ATACTTAAACAAAACA Coding sequence (CDS) from alignment at Sc0000098:680341..687556- >Blg01746.4 ID=Blg01746.4|Name=Blg01746.4|organism=Branchiostoma lanceolatum|type=CDS|length=771bp|location=Sequence derived from alignment at Sc0000098:680341..687556- (Branchiostoma lanceolatum)
ATGCAGGTCCTGAGTGTAGCCGCCATTCTGATGTTCCTGACAGGGAGCTT
TGGCTCCACCGATCTGTCACAAGAACAGATCAACACCATCTTACAGGCGC
ACAACAACTACAGGAAAGCCGTCAACCCTACAGCTGCCAACATGGAGTAT
ATGGAGTGGGACGATAGCCTGGCGACCATAGCGCAGGGCTGGGCGGACCG
CTGTGACTTCGCACACAACCCGAACCCGGCGGCGAACTACGCCGGGTCGT
CTGTAGGGGAGAACATCTACGCCGGCACTGGAAGCTACACTGCGGGCAAG
GAAACCGAGAACTGGAACGGTGAGGTGTCTGACTACACGTACAGCAGCAA
CTCGTGTAGGAGTGGCGCCGTCTGCGGACATTACACACAGGTTGTGTGGG
CCACCAGTAACAAGCTTGGGTGTGGCTGGAAGCTCTGTGGTACTCTCGCC
ACTGTCAACTGGAACAACGCCAACCTAGTGGTCTGTAACTATGCCGCAGC
TGGTAATTTTATTGGACAGAAGCCCTACGTCAGTGGCACACCCTGCACAC
AGTGTGCGAACGGCAACGACAACTGCTCCGACAACTTGTGCGGCAACCCG
TCTGGTGGTGCTACCAGTGCCCCCAATGGCAATGGTGCAGGAGGTGGTGC
GTCCAATACTACTGACACACCCAACGAGGGTGGAGATAACGGCGCTACTG
CTACTCGCCACTGGAGCATGCTGCCGCTAGGGGGCGTGATTGTGACGCTA
CTCATACTCAACATGCCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01746.4-exon-Sc0000098-1570713199:687009..687556 | Blg01746.4-exon-Sc0000098-1570713199:687009..687556 | Branchiostoma lanceolatum | exon |
| Blg01746.4-exon-Sc0000098-1570713199:684540..684670 | Blg01746.4-exon-Sc0000098-1570713199:684540..684670 | Branchiostoma lanceolatum | exon |
| Blg01746.4-exon-Sc0000098-1570713199:683991..684096 | Blg01746.4-exon-Sc0000098-1570713199:683991..684096 | Branchiostoma lanceolatum | exon |
| Blg01746.4-exon-Sc0000098-1570713199:683479..683588 | Blg01746.4-exon-Sc0000098-1570713199:683479..683588 | Branchiostoma lanceolatum | exon |
| Blg01746.4-exon-Sc0000098-1570713199:682924..683015 | Blg01746.4-exon-Sc0000098-1570713199:682924..683015 | Branchiostoma lanceolatum | exon |
| Blg01746.4-exon-Sc0000098-1570713199:682507..682557 | Blg01746.4-exon-Sc0000098-1570713199:682507..682557 | Branchiostoma lanceolatum | exon |
| Blg01746.4-exon-Sc0000098-1570713199:681740..681781 | Blg01746.4-exon-Sc0000098-1570713199:681740..681781 | Branchiostoma lanceolatum | exon |
| Blg01746.4-exon-Sc0000098-1570713199:680341..681344 | Blg01746.4-exon-Sc0000098-1570713199:680341..681344 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000098 | genome | Sc0000098:680341..687556 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01746 |
|
