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Sequence
The following sequences are available for this feature:
mRNA from alignment at xfSc0000909:3..3814+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01844.1 ID=Blg01844.1|Name=Blg01844.1|organism=Branchiostoma lanceolatum|type=mRNA|length=3812bp|location=Sequence derived from alignment at xfSc0000909:3..3814+ (Branchiostoma lanceolatum)
GAGGAAGACAATATTTGAACTAAGTTTGCATGGAGAAACAAGTACGGTTT
ACTTCATATGTTTCTCTATTATTGCATCTTTGTAACTTTTTTATGAAAGC
TGGACAACTTGGGACATGAACAATAATACAATGTCCACCATGCCAACAAT
GGAGTAAACAAAGTTCTGTTGTAGTCCGCATAGTCAATGCCTTTTTTCTG
AAATTGATCTGTTTTCCAGTTGACTGTGTACAACTTCAAGGGAGGACCAT
GTTACCGGTGCATGTACCCCACCCCTCCCCCTCCTGAAACTGTCACCAAC
TGTTCAGATGGGGGAGTATTGGGTGTAGGTGGGTCAGACTATCTCATTTT
TGCCATAAAACCCTAAATTTTGTTGTCATGCTGCCATAAATGTTTCATGA
TACCAGTTTTTATGCCTTTTACACTTTTAAATCTATTTGTTTCTTGTCAG
AGTTTTTCTTACTGTAAAGTGTCATTGAGCTGGGGGCATGTTTGTAAAAT
CCCTATACTTGGATCTCTCTATCCAGGCCATTTGCCTACTGAAAACTCTC
AGAGGCATTAGATATGATGTCCTTCTTCTCCTCACATTTCAGTGCCAGGT
ATCATTGGCTGTCTACAGGCTCTAGAGGTCATCAAGATGGCAGCTGGCAA
GGAGGGTATCCTTATTTATGTATATACCACAACATGCAATACTACAGGCC
ATCATTTGAAAATATCTTCCTTTTCTAGTTTTCATTTTGAAAGGCAAATA
TGGTCTACCCTGCTGTCATATATCAGTCAAGCTCCAGAATTTTAGAAGAC
ATTAATATTTTTGTATACAATACAAATGATCACTTACCAAAAAGGTAATA
TATGCTTGATCATACTGTGCAACTTTTGAGTGTCTAGTTCTTATTCTTTC
CAATAACCTTCAAGGTCAGGCTTATTCTGATGAACTGATGAAAAAAATCA
TATTGGCACTTGATATCTCCCATTTTGATTGACGTCACCTTGACTGCACA
CCCAAGTGTCTTACAGTCAGAGGCTCCTCTTGTTTGATGCTCTGGACGGA
ACGTTCCGTGCTATCAAGCTGCGCCCACGTCAGGCCAGCTGTGCGGTGTG
TGGAGATGCGCCGACAGTCACACAACTACAGGACTACGAACAGTTCTGTG
GGGCCAAGGCTTGTGACAAGGTAAGTAATGAATATAGGAATGCTCCTTGA
CATCCTCTCAATTCTTGCTGTTTCCACTGAAATAATACATGATATACATC
AGTGTAAAAAAATGAGAAAAAAGAAATGCTATTAATCCATTGGGAATTTT
GACAAATAAATTCCCATAAGTATTTGCAAACAGTCCTCTGGTTTCATGTA
GTTTTGCATACATCGTTTCATCTTCCTCAACATTGTATCTGCACATCCAC
AGTTCACAGCAAATATCTTCAAATGTCAACATTTTAGGTGGAGTTCAATC
TATAGTCTACTCCTGTACAGGTTACTGGTCACCTGATCTATCTAAACAGT
AACTAAATAAATCAACCAAATTCTGCAAAGAGTTGTTCATCAGAGGGACT
AACTCAAATTATGTTCATATACTATAAATTCCCAGTGTTCTAATAGGAAC
TTGAAGGAAATAGTCTAGCTCATGTTCACCTATTTCCTTTCCTACAGACA
CCGTCACGGAGGATCCTCCAAGACAATGAGAGGATTTCAGTTAAGGTGAC
AACTGTTCCGTATTCCCATAATTACACCAAGAAGAAGGAGTGTGGCATAT
CATGTGACATATGTTGGAGAACAGTTAGTCAAATTTCAGACACTAAACCG
TAAATTCTGACAAGCATGTGCTGGTCTATTGTACAATGAGATTTTCAACT
CCAGGGGAATTTATTCTTCTCCAATTGTAGGCCATCCTCGAGTATCATTC
CTGTAGCCTGAGTACCATCCTCCGTAGTGACCGCTGGCTCAATGCTGTTC
GCTTGCTAATCCATGGTTAGAAAGCGAAAAGCATTGAGCCAGCAGTCACT
ATGGAGGATGGTACTCAGGCTATCATTCCTGACAGTTTTCTGTTAAGTAC
AGCACAGAGTGGTTGTTATGTTTTCAGGAGTACCACACTGTCCTGAGTAG
CGGCGCCCCCCATCTGTTGGTGGATGTACGACAGCCTGTGGAGCTGGACA
TCTGTCAGCTGCCCAACCTCATCAGTATCCTTCTTTATGTAGCCAAGCAG
CCCATGGTTGACTAGCTGGACATATTGTTCCAAACAGTGAGAGATTGTGT
AAGACAGGCCACCTTATTTGTATCCAACAATTATTGGATGGTGCCCTTCA
TTTTCAGATGGAACTCAGGCCATCTAATTGCTCTTATTATAGTACATGTA
GTTGTATTTTTAGTTGCAAACTTTGGGAAGTCACAGCTTCTCACTTAGTG
ATATCCCCAATGTCATTACATTCCCTTCTAAAGGGGAACATACAGTTTTC
TGTGTTTTTCTTCTTCCTTCTATGGGTGCCAGGTGGTCATTTTTAGGACC
AAATAGATTTAGATGGTGAAATATGGGGTGGGAAACATACTGTATTGTTA
CCTTAACATTTCCATCAGATATTCCCATATCCCAGGTGTCCAGACCAGAG
CAGTTGCAGCAGCTGAAGGCAGCTGTAACCTGCAAATTACAGCAGCTGGA
ACAAGATGAACATAAGTTACCAGGTACATGTGAGAATGAGAACAATTAAC
ATTTTCAGAAATCATGTCAAACATCACTCTAGCTGTACTTAGCTAGGTAA
TGCTTCATGTATTCATCCATTTTAGGCTTGTGTCCACCTGTGGAAAGTAG
AGACTATTGGAAAGCAGACACAAGCTGAATCTGGATGGATTCCAGGCTAT
TGTAAACAAAGAAAAATATTTTTACATCCAACACAAAGCTGTGATTTAGA
AAATGTTTTTTATTAAGTTACGGCTAGTCATTATTAGTACAATTTCTTGG
TTGACTACCATACATTGTAAAATTTTAAAGAAATATCACTGACATTAGAT
GTATGAATTATGGGTGTAAAAGTTCATGTTTCCTTTCCTCAAGTGTATGT
CGTCTGCAGACTAGGCAACGATTCCCAGATTGCAGTTCAACACCTGAGGA
AACTTCTGTCAGACATGCCAGTCAACGTGACAGATATCCGAGGGGGCCTG
ATGGCCTGGGCGAGGCAAATAGACACCTCCTTCCCAGAGTACTGATTGTT
GAGCATACAGGGTACTATGTTTATGATAGGGTGGACTGATACTAAAGCAT
GTAGTAGCATTCTATTTTCTTACCCATTAAGCTAAAACATGACTGCTTAT
TTGTAACTATCAAGAAGATTCACCCTTAGCCTATTATGATTTTTGCAGGA
TAACACAGTGACACTGATGTTTTTATGATCCAATTGGATGCTTTTGGTCC
ATCAATGAAGAACTACAAGAACTGACCTCTGACCAATGATGATACATTCC
TAAACTATGCTTCCTGAGGGGTGAAGAGATTTTTCTTACTTTAAAGTTTC
AGTCATGTTCATTTTTGGATCTACTTTCAAACAAACATGACCCTTTTAGA
AGACACATAGAAGTGATAAAGCGGAAGATTTTAGATCTCTGAAATTTATG
AAGAAATTACAAATCTTAATTTTGAGACATAAAAGCTTGTACATACGACA
GTACCAACACATGTACATTTGGTGAACAAACTTTTTATTGTATCTATATG
TTCATCATATATATGTACATTCTTTATTTATTATTACAGGAATTGTCAAC
TTACATGTGCTTATTTGATTAATCAAAGATAGAATCAATAAATATTTGAA
GTGATACAAGTA Coding sequence (CDS) from alignment at xfSc0000909:3..3814+ >Blg01844.1 ID=Blg01844.1|Name=Blg01844.1|organism=Branchiostoma lanceolatum|type=CDS|length=648bp|location=Sequence derived from alignment at xfSc0000909:3..3814+ (Branchiostoma lanceolatum)
ATGTACCCCACCCCTCCCCCTCCTGAAACTGTCACCAACTGTTCAGATGG
GGGAGTATTGGGTGTAGTGCCAGGTATCATTGGCTGTCTACAGGCTCTAG
AGGTCATCAAGATGGCAGCTGGCAAGGAGGTGTCTTACAGTCAGAGGCTC
CTCTTGTTTGATGCTCTGGACGGAACGTTCCGTGCTATCAAGCTGCGCCC
ACGTCAGGCCAGCTGTGCGGTGTGTGGAGATGCGCCGACAGTCACACAAC
TACAGGACTACGAACAGTTCTGTGGGGCCAAGGCTTGTGACAAGGAGTAC
CACACTGTCCTGAGTAGCGGCGCCCCCCATCTGTTGGTGGATGTACGACA
GCCTGTGGAGCTGGACATCTGTCAGCTGCCCAACCTCATCAATATTCCCA
TATCCCAGGTGTCCAGACCAGAGCAGTTGCAGCAGCTGAAGGCAGCTGTA
ACCTGCAAATTACAGCAGCTGGAACAAGATGAACATAAGTTACCAGTGTA
TGTCGTCTGCAGACTAGGCAACGATTCCCAGATTGCAGTTCAACACCTGA
GGAAACTTCTGTCAGACATGCCAGTCAACGTGACAGATATCCGAGGGGGC
CTGATGGCCTGGGCGAGGCAAATAGACACCTCCTTCCCAGAGTACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01844.1-exon-xfSc0000909-1570713199:3..330 | Blg01844.1-exon-xfSc0000909-1570713199:3..330 | Branchiostoma lanceolatum | exon |
| Blg01844.1-exon-xfSc0000909-1570713199:595..657 | Blg01844.1-exon-xfSc0000909-1570713199:595..657 | Branchiostoma lanceolatum | exon |
| Blg01844.1-exon-xfSc0000909-1570713199:1009..1172 | Blg01844.1-exon-xfSc0000909-1570713199:1009..1172 | Branchiostoma lanceolatum | exon |
| Blg01844.1-exon-xfSc0000909-1570713199:2080..2176 | Blg01844.1-exon-xfSc0000909-1570713199:2080..2176 | Branchiostoma lanceolatum | exon |
| Blg01844.1-exon-xfSc0000909-1570713199:2571..2675 | Blg01844.1-exon-xfSc0000909-1570713199:2571..2675 | Branchiostoma lanceolatum | exon |
| Blg01844.1-exon-xfSc0000909-1570713199:3046..3814 | Blg01844.1-exon-xfSc0000909-1570713199:3046..3814 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000909 | genome | xfSc0000909:3..3814 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01844 |
|
