Blg01848.0 (mRNA) - B. lanceolatum

Overview
NameBlg01848.0
Unique NameBlg01848.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0002840:266..1824+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01848.0 ID=Blg01848.0|Name=Blg01848.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1559bp|location=Sequence derived from alignment at xfSc0002840:266..1824+ (Branchiostoma lanceolatum)
GTCAAAGTAAGCTACATGTTGGTGGGACACACCCACGACAAAATCGACCA GCGGTTCAGTGTCCTCACCCGCAGCCTGGAGGGCAAGAACACCGTAACGG TGTCGAAACTCTGTCAGGAGGTTAAGAACACCTTCAAAGAAGTGGAAGGT AAGAAGATGACAAATGCTCTGTTGCTAAATATGAAGTTGCTATTTCAGGT TGTGATCAAAATTATGCATCTAATTATCATATAAGAACCCACTGGCACAA AAAAAACACAACTTGCATCGGCAAGAACAATTCACTATAGCAAAAAAGAC ACCATTTAATAAGAGACAAACTTTTAACACTTTTTTTTTAGGCAACTACA TGTACATGTGACAAGTCCTGGCCTTTTTCGACAAAAATGCCTGCAGTTGC AAAAAGCTACATGCTGTTATCTCCTACTCTAGTACCATAATCCTTAGGCT ATTGCAAACTCTATATCTAATATCAATTTATCTAATGATAATTCTCAATT CCATGTGCAGGCACGGGAGGCCCAACAGTCCTTGAGGAGATATTTGATGT ATCATCCTGGATGGACAGATATCTCTGTGGGTACCACAACCACGTTGAGC CCCGTGCCTTCCTCTTCAAACTTGGGCCTGATGGGCATTCTGTGGCTCAG TTCTACAGAATGCATTCACACAGGCACAAAGAGTGGACAGTTCTCCCCAG CTTTTTGAAGGAGGAGCCCCCAGTGACCTCCATACCACAGGTACACTATC ATACAATGTATTAAACAAAGTTGATTTTTTCATTTCTACATGCATCTGCC TTTTCCAGTTCATGTTACTGTACTACATTTCAACTTTACAATTATGAAAT TTAAAATAAGTGAATAATATTATTGTATAGCATAATTGTGATCAAGGTGG ATAAAATTACTTTAACCTCCTTGTTGTGATCTAATTGGATCTCTTACTTT GTTAACAGCTCTTAGAACCAGATTTTGGCCGTATAGACATACGGCAACTC AGAGGAGACCTGCAGAAATGCATTGCTGAACTAGAGATGGATGACCCTCA GAACATCCAGGAGTGGCGAACATTTCTGCAAAAACGTGAGGCCTTGGCAG AAAAATGGTCAAGAAGGCAGCAGCCAAGAACTACGTGGCCTCTGAAGCAA CTGCAGGTAAGGCGGAATGCTGTTTGCACGTTTGCAGATAGAACTCACAA TCTGGTTTTCGTATTGGTATTAATAGTATAAGTTTATTGCAAGTTTGCAC AACTGCAAACAACATAATCACTTCATGCAGGATTATATCCTAGGACTCTT GTTGTCTTTATCATTGATAGTTGATAGTTGATGTTAACTGCAGAAAGTAA GCCCTTATTTGATTCAAATCTAAAACTTTGTAACTCAGGGAGCTATGCAG AGACAGAGACCAGCAGTGTCTCAGCCCAGTTTGGTGAGGGATCTCCTAAG AGCCAGGATGGAAGCAGAGGCAGAGCATGTCGAGGTAAATCACATCTTAC CGAAATTCAACGACTCGTGCTATTCGAGAAAATAAAAGGCAATAGATTTT AAAAGAATG

Coding sequence (CDS) from alignment at xfSc0002840:266..1824+

>Blg01848.0 ID=Blg01848.0|Name=Blg01848.0|organism=Branchiostoma lanceolatum|type=CDS|length=723bp|location=Sequence derived from alignment at xfSc0002840:266..1824+ (Branchiostoma lanceolatum)
GTCAAAGTAAGCTACATGTTGGTGGGACACACCCACGACAAAATCGACCA
GCGGTTCAGTGTCCTCACCCGCAGCCTGGAGGGCAAGAACACCGTAACGG
TGTCGAAACTCTGTCAGGAGGTTAAGAACACCTTCAAAGAAGTGGAAGGC
ACGGGAGGCCCAACAGTCCTTGAGGAGATATTTGATGTATCATCCTGGAT
GGACAGATATCTCTGTGGGTACCACAACCACGTTGAGCCCCGTGCCTTCC
TCTTCAAACTTGGGCCTGATGGGCATTCTGTGGCTCAGTTCTACAGAATG
CATTCACACAGGCACAAAGAGTGGACAGTTCTCCCCAGCTTTTTGAAGGA
GGAGCCCCCAGTGACCTCCATACCACAGCTCTTAGAACCAGATTTTGGCC
GTATAGACATACGGCAACTCAGAGGAGACCTGCAGAAATGCATTGCTGAA
CTAGAGATGGATGACCCTCAGAACATCCAGGAGTGGCGAACATTTCTGCA
AAAACGTGAGGCCTTGGCAGAAAAATGGTCAAGAAGGCAGCAGCCAAGAA
CTACGTGGCCTCTGAAGCAACTGCAGGGAGCTATGCAGAGACAGAGACCA
GCAGTGTCTCAGCCCAGTTTGGTGAGGGATCTCCTAAGAGCCAGGATGGA
AGCAGAGGCAGAGCATGTCGAGGTAAATCACATCTTACCGAAATTCAACG
ACTCGTGCTATTCGAGAAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01848.0Blg01848.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01848.0-exon-xfSc0002840-1570713199:266..413Blg01848.0-exon-xfSc0002840-1570713199:266..413Branchiostoma lanceolatumexon
Blg01848.0-exon-xfSc0002840-1570713199:776..1005Blg01848.0-exon-xfSc0002840-1570713199:776..1005Branchiostoma lanceolatumexon
Blg01848.0-exon-xfSc0002840-1570713199:1224..1421Blg01848.0-exon-xfSc0002840-1570713199:1224..1421Branchiostoma lanceolatumexon
Blg01848.0-exon-xfSc0002840-1570713199:1654..1824Blg01848.0-exon-xfSc0002840-1570713199:1654..1824Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0002840genomexfSc0002840:266..1824 +
Properties
Property NameValue
GeneIDBlg01848