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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000294:74717..80996+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02110.4 ID=Blg02110.4|Name=Blg02110.4|organism=Branchiostoma lanceolatum|type=mRNA|length=6280bp|location=Sequence derived from alignment at Sc0000294:74717..80996+ (Branchiostoma lanceolatum)
AATTGTCTGGGTTTCAGTTCACCTACTGCAAACGGTTCACATTTTGTAAA
TCGCTGACAACAGAACTATAATCATGGCAACTGCTCAATTCATCTGAAAG
CAAGCTCGATGTATACAAATCATAAATCAAGTACTCCCTCAATTCCATCA
AAAAAAGAGAAAAAGGTGGGGAAAACGTACGTATCATTTAGGTCGATCTG
TCAACAATCTACATTTTTGTCCGAAACTATTTCCAACGTAAACGTACTTT
GGTTGTTTGACAAATGATGCTCCAGTCAATGCCCAAAACTATTGAACGTA
ATCCTGTTTGTCTTTCCAACCAACAGGTAAACGGGAAATACATCGTGAAG
AGTGGAACTGAGTTCCGGCACTTCACCAAGGTGGAGGTCGACTTCATAGG
TCCGAAGTTCGAGGTCAGCACCATGAAACTAGAGGTCAGCAGCGCCTACC
GGGAGGACGCGGAGATGAAGAAAATTGTTGAGGAGTTCACAAGTACGTAA
CATAGTCTGGAATTTACAGGCGTTGTATGCTGTTCGTGTACTTGTTTGCC
TTTCTGAATGGAATGTGGCTATCAAAGGAATGTAAGCTCTTTTTAGACTA
TCGTATAGCCTCGTAGATCACTCGACCGAACCTTGTAGCCCTTCCAGTCC
TTTTGAAGCAGTCTCGTCCCGGAGGAGGCACTCACAATACAGCTCATCAT
TTCTACGTCTGGCATTTTGAATAACAGACGACATTAATCATACCATTTCC
ATGATCTAACCTTGCCGTGCTGCCTGTTCGAAAAGGAATTGTTCATTTGT
AATCATTTTATTTTCTTCTTAAAAGGTTTGATGTCTGACAAGACAAGCAC
TACTCTGGGGAAGATCGAATCAGAGCTGGACGGGAGATTCGCAACCGTCA
GAACTCAGGAGAGCGCTCTTGGTAAGTCCAATGACAGGAATGTTGTTCTC
CATTAGTCTTAGTGATCAGTACCAAGGACAGGGGTGTTGATTATCCTTTA
GTACCAATAATCAGTACCAAGGAATGTTGGTTATCCTTTAGTGTCGGTAC
CAAGGACAGGAATGTTGGTCATCCTCTGTTTTCGGTGATAAGTACCATGG
ACAGGACTGTTGGTTATCCTTTAGTGTCGGTGTTCAGCACCAAGGACAGG
AATGTTAGATACATGTATCCTTTAGTGTTGGTGTTCAGTACCAAGGGCAG
GACTATTGGCTATCTTTTTGTGTTGGTGACTAGTACCAGGGTCAGGATGT
TGATTATCCTATAGTGTGTTTAGCACCATGAACAGGAATGTTGGTTATCC
CTTTGTGTCTGTGTTCAACACCATGGACAGGAATATTAGCCTCCTTTAGT
GTCTGTGTTCAGTCCCAAGGACAGGAATGTTGGTTATCCCTTAGTGTCGG
TGTTCAGCACCAAGGACAGGAATATTGGTTATCTTTTAGTGTTTGTGATC
AGTACCAAGGAGAGGAAATTGATTATCCTTTAGTGACTAATGACTCCAGC
CCGGACATTTACAACGCCCATCTCCCTCCACGTAGGAAACTTCTTGACAG
ACGTGATGGTCGCGGCCACCCAGGCTGACCTGGCCATCCTGAACTCTGGC
ACCCTCCGGTCCGACTCCGTCCATGGGGCCGGCGATTTCACCATCAAGGA
CCTGCTGACTATCCTGCCGCTCATCGACCCCCTGGTGGTCCTGGAAGCTA
CGGGTAGGAACGAAGAAAGACTTTTCACACTGTAGTTTCCCCTGCATCTG
TTGTCGGTTCAAAGCAAAGCAAGATAAAAGAGGAAAAGTCACAAAAGAGA
GCGACTTTTACAGATGATTTTCATACCAAGTGAAAGAAGGTTGTACCGAT
GAGGCATGAATGGTCCGTTGTGAATAATTCTGATTTCAAACAACTTTTCT
CGCCATCCTGCAGGTACTCAGATCATCCAGGCTCTAGAGAACGGAGTGAG
CCAGTACCCTAAGACCGAAGGCAGGTTCCCGCAGGTGTCAGGCATCGTCT
TCGGGTTTGACCCTGAACTGCCACCGGGCAGCAGGGTGGACCCCAACTCC
GTCAAGATCGACGGGGAATACCTGGTGCCCGAGAAGGTAGCTGTCGTATT
CTCCCTTGCACTTATGTGGCAAACAAATTGACAGTGACAATGATAATGAT
AACCGGCAAAGTTGTAAATATTCCCAATGCTACACGGATATCTTTTGAAT
GACATAACTTCTGAATTGACAAGGTTCTTTGATTGATTCGCATTTCAGAC
ATGTTCCATGGCACAGTCCACACAGACGAAATGAGCTTTGAAGAGAAGCA
TATGACGTCACAATATGTTAATTTTTGTTTTTTTCTCAACCCAGGTGTAC
AGAGTATGTACCAAAGCCTACATCGCACGTGGCAAAGATGGATACGACGT
GTTCAAGGACTGTAAGCCTCTGGTACGCCTATTACTGCTGCAAACATATA
TATCACCAATATGTACATCGTCTTAAACGTGATTCTCTGTCTATCACAAC
ATCACTGAATCTATCATTATAATCTTTGTGCTTGAAGTGCACACATTATT
TATTTGTTTATTTATTGGTTCAGCATGCACATGCCAGGGTTGCCCAACTA
GCCGGAGGCTATTACTAAGGGCGAACCCATGTGCGGTCATAGGACTGTAG
GTTTTGGAACCACTCACACCGGGAAGGACCCCTACTCTTTTCGATAAGTG
CGGTGGGCTCTTTAACGTACTCGAGGTGTGGCTCTCCTCGAACACAGAAC
CTCCATTTAACGTCCTATCCGAGGGACGTCCCTAACAGAAGCTAGGTACT
CATTAGAACTATAGCGCATGACATATTTCGACTGAGGACACTTGAATTTG
TTCCAAACAAATGATTCGATAGACTGTGCCCATTTTGCTGATACACCTAA
GAGGCAAACTACAACTTAGATACGGTTAAGTCAATATAATACAATGACTA
ATTGAGTAATTTTCCGTTTGCGGCAGACGGACCCAGACGAGGGCCCCATC
CTGTCCACCGTCATCCAGAACCACTTCACCGCAGTGGACATCGTCAAGGG
TCTGAAGCCCTGCAGATCCGGACATCACCAGAGCCTTATCAACGTGGCCA
GTGTAGCAAAGTAGGTTTCCAATCAGTTCTTCCTGCTGTTACATAAACAA
TTCATTTCATTGTCATGAAACAGAATAGCAGGACTTAACATTGAATTTCA
GCAGTATGCAAACATTCATGTGATTGATCATGTCTTAATTGCCTGTTTTG
ACTTACACAGGAAAAACAGCGTGGAAGTGCTGAATAAAAGCAGCGTCAGA
ACCTTGCAGTCCCTCTTCACCACCATCGCCCCGAAGGTAGAGGGCAGGAT
CATCCAAGTGAACGAGGAGGTACGGCTGTTCCAGCAGTGTGAATGTTTGT
GCAATTGTTGTTAAACCCTAGCCTGAGTATCATCCTCCGTAGTGACCGCT
GGCTCAATGCTTGTCGCTTGCTAACCACGGAAAAGCAAGCGAAAAGCATT
GAGCCAGCGGTCACTACTAGTTTAAGCCTTGATCAGCCTTACATTAGTCA
GCACTGTATACCTATATTCTTTGATACCTTCGATGGTTACAGGAAAACCA
TTAGCATGACGTTGTTTCATTCTGATTGTCCGTAGATGAGGAATAAGCAC
GCTGAAGAGAGGAAGGCAGTTGAAGCCGAAGAAAACATCCAGATAGAAGC
TGCTAATCCTCCAGAACCAACGCCCGGTCCTCCTGTCATCAAACTAGAGT
CAGAGTCAGAGCCAGCACAAGAGAAGGAAACTCAAGGAGAAACGTCCACA
GAAACGTCTACAGATGCCAAGAAAGAAACGCCTTCTGCTGGCGAGGAAGA
TGCTCCACCCGCTGATGATGGGAAAGAAGCTTCAGGCGACCAACAGACAA
CTGAAAGCCAAGAAAAAGAATCAGGAGAAGGCAAAGAGGTAGAAAAGGAA
GGAGAGAATAAGGAAGTCCCCGGCGCATCGACAGAAGGTGCGGATGATAA
AGAGAACAAGGAGGCGGCGGATGCTGCAAAAAGCGAGCAAACCTCTCCAA
CCGAAAAGGCTTCAGATGACAAACCGTCCGAGGAATCAAAGAGTGAAGAG
AAGAACGAAGAGCCAAAGGAAGGCGCCTCGGAGCCTGGAGATGCGGCAAA
AACAGAAGAACCGGCAAAAGCAGAAGAACCTGCTGAAAAGGAACCTGCAA
AAGAAGAACGCGCTGCTAAAACAGAAGAGACAGCACAGACAAAGGATACC
ACCACAACGGACGAGCCTTCGACAAAAGCAGAGGAAGCTACTAAGACAGA
GGAACCTGCACAGACAGAAGATGCGGGTAAGGCAGAAGAAACTGTACAAG
CTGAAGAACCTGCCAAGACGGAAGAAGCCCCACCAGAAAATGAAGCTGCT
GAGACAAAAGAACTGACAAAAACAGAAGAGCCGGCAACAACAGATGACCC
GGCAAAAACCGAAGAGCCCGCAAAAACAGAAGAGCCCGCAAAAGCAGAAG
AACCGGCAAAAACAGAAGAACCGGCAAAACCGGAAGAATCGACAAAAACA
GAAGAGCCGGCAAAAACAGAAGATGCTGCTAAGCCGGAAGAGTCTGCAGA
GGGAAACGCCGTGGGTGAACCTGCCAAAACGGAAGACGCTGCTACGACAG
AGGAACCCGCCAAAACGGAAGTCGCTGCTGCGACAGAGGAACCCGCCAAA
ACAGAAGTCGCTGTTACAACAGAGGAACCCGCCAAAACGGAAGACGCTGC
TACGACAGAGGAATCCGCCAAAACGGAAGACGCTGCAACGACAGAGGAAC
CCGCCAAAACGGAAGACGCTGTTACAACAGAGGAACCCGCCAAAACGGAA
GACGCTGTTACGACAGAGGAACCCGCCAAAACAGAGGATGCTGCAAAACC
TGACGATCCACAAACAGTAGATACTGCTGCTAAAGAAGAACCTACAAAGA
CAGAAGACACTGCGAAGACAGAAGAACCTGTAAAGGCTGAGGATGGTACA
AAGGCAGAGGAACCAGCACAAGCGGAGGCCGATGCCAAAACTGAAGAGCC
TACAAATGCTGATGCTAAAACAGAAGAACCCGTGAAAGCTGAAGATGCTG
CTAAGGGAGAGGAAGCAACCAAAGCAGAAGATTCGGCAAAGGTGGAAGAA
AACACCGAAGCTGACAAACCCAAAGAGGAGGAGAAAACACCGGAATCCAA
AGCAGAGGATGCAGCAAGCCCCGACGACACTACAGCCACAAAGACTGAAG
ACGAGAACAAAGAAACTCAGGAAACTGATAAATCAGCTGAAGCTGCAACA
AGCGAGGACAAGACAAAAGAAGACGTGTCTGCAGACAAGAAAGAAGCTGA
GGCACAAGAAGGTGCCGCGTCCTCCACAGGAACAGATGTCAAAGCAGAAA
CTACTGAGGCTGAACCTGCAGCGTCATCAGAAGCTGCAGCACCGACTGAG
AACACCCAGTAAAGACTTGTAGGGGCACCTAGCCTGTCTACAATGGACCG
ATACGCACATTTTCAAATCCATAGGAGTGCTTGACTGAGGTTGATTTCGG
GGTGATGTGGATTGTCACTGACAAATGTAGGTTTTCAGAATGGACTTAAG
GGTGGTGCCGTGGAATGATAACGATAGAAGATCATAGAAGGGTCAAATAT
ATGGCTTGGTGTTAACGTGTAAAATTTCAAAAACAATGTACTACTGAGTG
TACATAATCACATGTAAGAAATGTACAGTGGGTTTTGAGTCAGACTAATT
TGGCGTCATTGCCAATCAGGTTTTTGTTGTGTCGTGATTATTAGGTTGAG
GGTACTTTTCAACCGTGGATTTTCTAAGAAAAACATACATATCTCAGAAA
ACGTACAGACACAGAAAACGCACTAATAATAGTCTTTCCTAGTATACTGT
TGTACAACCACCAACGCTGCATGGATTGTCATTGAACAACCAAAACACAA
GAACTCAGTAGAATCATTAGCTTTATTATTTATTTTGAATAAAAGTGTTC
GATGAAATCTTCAACCTCGACTCGCTGTTTTAAATGTTCCAATTCAATTG
TAGAATAAGCATTTCAGGGAGCTCCTGCAGTCAAATGTAAGGAAACCAAG
GAAAGAATGAAAAGAAAGTATGGACACTAGCGAAACCAGCAAAAACACAG
AAACTAAGGAAATAAAGGAAAGTAGGGAGACTAGGGCAAACGCTACAGTA
CAGCAGCGCAGCTCAGTATGGACGCCCATGGGTGAACAGTGCTAGTAAAT
TAAACCTGGTTATCAGATGCATATTTGCAC Coding sequence (CDS) from alignment at Sc0000294:74717..80996+ >Blg02110.4 ID=Blg02110.4|Name=Blg02110.4|organism=Branchiostoma lanceolatum|type=CDS|length=2808bp|location=Sequence derived from alignment at Sc0000294:74717..80996+ (Branchiostoma lanceolatum)
ATGTATACAAATCATAAATCAAGTACTCCCTCAATTCCATCAAAAAAAGA
GAAAAAGGTAAACGGGAAATACATCGTGAAGAGTGGAACTGAGTTCCGGC
ACTTCACCAAGGTGGAGGTCGACTTCATAGGTCCGAAGTTCGAGGTCAGC
ACCATGAAACTAGAGGTCAGCAGCGCCTACCGGGAGGACGCGGAGATGAA
GAAAATTGTTGAGGAGTTCACAAGTTTGATGTCTGACAAGACAAGCACTA
CTCTGGGGAAGATCGAATCAGAGCTGGACGGGAGATTCGCAACCGTCAGA
ACTCAGGAGAGCGCTCTTGGAAACTTCTTGACAGACGTGATGGTCGCGGC
CACCCAGGCTGACCTGGCCATCCTGAACTCTGGCACCCTCCGGTCCGACT
CCGTCCATGGGGCCGGCGATTTCACCATCAAGGACCTGCTGACTATCCTG
CCGCTCATCGACCCCCTGGTGGTCCTGGAAGCTACGGGTACTCAGATCAT
CCAGGCTCTAGAGAACGGAGTGAGCCAGTACCCTAAGACCGAAGGCAGGT
TCCCGCAGGTGTCAGGCATCGTCTTCGGGTTTGACCCTGAACTGCCACCG
GGCAGCAGGGTGGACCCCAACTCCGTCAAGATCGACGGGGAATACCTGGT
GCCCGAGAAGGTGTACAGAGTATGTACCAAAGCCTACATCGCACGTGGCA
AAGATGGATACGACGTGTTCAAGGACTGTAAGCCTCTGACGGACCCAGAC
GAGGGCCCCATCCTGTCCACCGTCATCCAGAACCACTTCACCGCAGTGGA
CATCGTCAAGGGTCTGAAGCCCTGCAGATCCGGACATCACCAGAGCCTTA
TCAACGTGGCCAGTGTAGCAAAGAAAAACAGCGTGGAAGTGCTGAATAAA
AGCAGCGTCAGAACCTTGCAGTCCCTCTTCACCACCATCGCCCCGAAGGT
AGAGGGCAGGATCATCCAAGTGAACGAGGAGATGAGGAATAAGCACGCTG
AAGAGAGGAAGGCAGTTGAAGCCGAAGAAAACATCCAGATAGAAGCTGCT
AATCCTCCAGAACCAACGCCCGGTCCTCCTGTCATCAAACTAGAGTCAGA
GTCAGAGCCAGCACAAGAGAAGGAAACTCAAGGAGAAACGTCCACAGAAA
CGTCTACAGATGCCAAGAAAGAAACGCCTTCTGCTGGCGAGGAAGATGCT
CCACCCGCTGATGATGGGAAAGAAGCTTCAGGCGACCAACAGACAACTGA
AAGCCAAGAAAAAGAATCAGGAGAAGGCAAAGAGGTAGAAAAGGAAGGAG
AGAATAAGGAAGTCCCCGGCGCATCGACAGAAGGTGCGGATGATAAAGAG
AACAAGGAGGCGGCGGATGCTGCAAAAAGCGAGCAAACCTCTCCAACCGA
AAAGGCTTCAGATGACAAACCGTCCGAGGAATCAAAGAGTGAAGAGAAGA
ACGAAGAGCCAAAGGAAGGCGCCTCGGAGCCTGGAGATGCGGCAAAAACA
GAAGAACCGGCAAAAGCAGAAGAACCTGCTGAAAAGGAACCTGCAAAAGA
AGAACGCGCTGCTAAAACAGAAGAGACAGCACAGACAAAGGATACCACCA
CAACGGACGAGCCTTCGACAAAAGCAGAGGAAGCTACTAAGACAGAGGAA
CCTGCACAGACAGAAGATGCGGGTAAGGCAGAAGAAACTGTACAAGCTGA
AGAACCTGCCAAGACGGAAGAAGCCCCACCAGAAAATGAAGCTGCTGAGA
CAAAAGAACTGACAAAAACAGAAGAGCCGGCAACAACAGATGACCCGGCA
AAAACCGAAGAGCCCGCAAAAACAGAAGAGCCCGCAAAAGCAGAAGAACC
GGCAAAAACAGAAGAACCGGCAAAACCGGAAGAATCGACAAAAACAGAAG
AGCCGGCAAAAACAGAAGATGCTGCTAAGCCGGAAGAGTCTGCAGAGGGA
AACGCCGTGGGTGAACCTGCCAAAACGGAAGACGCTGCTACGACAGAGGA
ACCCGCCAAAACGGAAGTCGCTGCTGCGACAGAGGAACCCGCCAAAACAG
AAGTCGCTGTTACAACAGAGGAACCCGCCAAAACGGAAGACGCTGCTACG
ACAGAGGAATCCGCCAAAACGGAAGACGCTGCAACGACAGAGGAACCCGC
CAAAACGGAAGACGCTGTTACAACAGAGGAACCCGCCAAAACGGAAGACG
CTGTTACGACAGAGGAACCCGCCAAAACAGAGGATGCTGCAAAACCTGAC
GATCCACAAACAGTAGATACTGCTGCTAAAGAAGAACCTACAAAGACAGA
AGACACTGCGAAGACAGAAGAACCTGTAAAGGCTGAGGATGGTACAAAGG
CAGAGGAACCAGCACAAGCGGAGGCCGATGCCAAAACTGAAGAGCCTACA
AATGCTGATGCTAAAACAGAAGAACCCGTGAAAGCTGAAGATGCTGCTAA
GGGAGAGGAAGCAACCAAAGCAGAAGATTCGGCAAAGGTGGAAGAAAACA
CCGAAGCTGACAAACCCAAAGAGGAGGAGAAAACACCGGAATCCAAAGCA
GAGGATGCAGCAAGCCCCGACGACACTACAGCCACAAAGACTGAAGACGA
GAACAAAGAAACTCAGGAAACTGATAAATCAGCTGAAGCTGCAACAAGCG
AGGACAAGACAAAAGAAGACGTGTCTGCAGACAAGAAAGAAGCTGAGGCA
CAAGAAGGTGCCGCGTCCTCCACAGGAACAGATGTCAAAGCAGAAACTAC
TGAGGCTGAACCTGCAGCGTCATCAGAAGCTGCAGCACCGACTGAGAACA
CCCAGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02110.4-exon-Sc0000294-1570713199:74717..74881 | Blg02110.4-exon-Sc0000294-1570713199:74717..74881 | Branchiostoma lanceolatum | exon |
| Blg02110.4-exon-Sc0000294-1570713199:75043..75208 | Blg02110.4-exon-Sc0000294-1570713199:75043..75208 | Branchiostoma lanceolatum | exon |
| Blg02110.4-exon-Sc0000294-1570713199:75542..75637 | Blg02110.4-exon-Sc0000294-1570713199:75542..75637 | Branchiostoma lanceolatum | exon |
| Blg02110.4-exon-Sc0000294-1570713199:76252..76419 | Blg02110.4-exon-Sc0000294-1570713199:76252..76419 | Branchiostoma lanceolatum | exon |
| Blg02110.4-exon-Sc0000294-1570713199:76630..76802 | Blg02110.4-exon-Sc0000294-1570713199:76630..76802 | Branchiostoma lanceolatum | exon |
| Blg02110.4-exon-Sc0000294-1570713199:77061..77138 | Blg02110.4-exon-Sc0000294-1570713199:77061..77138 | Branchiostoma lanceolatum | exon |
| Blg02110.4-exon-Sc0000294-1570713199:77693..77826 | Blg02110.4-exon-Sc0000294-1570713199:77693..77826 | Branchiostoma lanceolatum | exon |
| Blg02110.4-exon-Sc0000294-1570713199:77977..78085 | Blg02110.4-exon-Sc0000294-1570713199:77977..78085 | Branchiostoma lanceolatum | exon |
| Blg02110.4-exon-Sc0000294-1570713199:78352..80996 | Blg02110.4-exon-Sc0000294-1570713199:78352..80996 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000294 | genome | Sc0000294:74717..80996 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02110 |
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