Blg02145.0 (mRNA) - B. lanceolatum

Overview
NameBlg02145.0
Unique NameBlg02145.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000509:82293..85585-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02145.0 ID=Blg02145.0|Name=Blg02145.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3293bp|location=Sequence derived from alignment at Sc0000509:82293..85585- (Branchiostoma lanceolatum)
TCTGTCGAAGCACCCGATGGTGGACCAGTATGACCTGTCACATGTGAAGG ACATCATGTGCTCTGCTGCGCCGATGGGCATAAACCTGACCATGGCACTA AGAGATAGAATGAAACCTCAGACTCTGAGACAAGGTATTGTGCGTAATGT CGTTTCGATTTTTGTGTTTGTTTCATATTCAGTGATTAGCCCAAAGTGGA CATGCGCGTGTTTATAGAATATTTGAAAAAAGAATGAACACAATCGTTTT ACGCGTTTATAGAATATTTGAAAAAAGAATGAACACAATCGTTTTACGTG TTTATAGAATATTTGAAAAAAGAATGAACACAATCGTTTTACGTTTCTAA ATTTAGGAATAAAAGATACATCTTTATAAGAGGAATGTTTCGTGATGTCT AGTTATATTCCATGTGTGCGTACGCGCGTCACATTGAGCATCGAAGTCAA AATGTTTAGGAGAATGGTCCCATCCTTGTTTGTTTCCTTCCTGCTAGGAT ACGGAATGACAGAGACTAGCCCCGTCACACACGGTGGTGTGGAAGATGAG TTCGTGCCTGGGTCAGTCGGTGTCATCATACCTAACACGGAGATTAAGGT AAGGACCTTAATTACGATCAATATTGTATAATAATGTCATTTTTTGTCAT ATCATTAAAAGTGACATCATAGCTTTATTGCCGTTGCGAATTGTGGGTAA GGTCATAGGTTTAAGCTCTCCAGTAGCAAACAAACATCCAAGTCAAAATT TTACAAAAATTCTACGACAACCTTAGACTGCGCATACGCACTCGGCCCTT TGAAATGACTTATTACGATAATCCCTCTCCTTTCAACAGGTGATCCATAC AGAGACTGGAGAAGCTCTTGGTGAAGGAGAAGACGGGGAAATCTGTGTCC GGGGACCGCAGGTCATGAAGGGTTACCTGAACAACCCTGTGGCCACGGCT GGGTGCATTGATGGCGACGGTTGGTTCCACACGGGTCAGTTTTTAGCCTC TACCAGGCTCCACAGGTCGGTGGAAAACTAGCAGGAATTGGCCAAATAGA CGGTTCCTCACAGGTTAGTTAGAGCCCGGCCACGTTCGTCTTACGATCTT CAAGTCGTACGATTTGTTCATTTGTTTATGTGAAGGATCTCCATTAGCTA TTATAATAGTGAGTACATCATACATACTGTACTATTCTTCCTGGATTCAT AATAAATAAATACAATAACACTAGAACACTTGTTAAACCTAACACATGTA TCTACATTTACAATAACACTAGAGCACTTGCAATAACATTGATTAAAAGA ATATTAATGGAGATGATAGTTCAGAGATCGGAATAAAAAATATATACAAG TGTGTAAAGTCATCCAGCTACCACCAATACACTGTTTGTGTTCGGGTTTT TTAGTCTATCCTTCAGTGATGTGTACGATTGCAAACTGAGCGCATTCAGG GGATAGCTGTACATGTGTCGTACAGAATTTAGCTGTATTGTTGCTGAAGA TGTTATCTTAGATCCTGGTCGGCGGTTGTTGGTTTTCTCATAGCACGTGT AAAAATCGTACGACATCAAAATCGTACAACGTCCTGTGACGAATGTGCCC TAAACTTAAATGGTCGCCAATTGTAAAATTTCCTGTATTACATTAGTAAG ATCGCTATTCAAAATATCTAAAATGAAGTACTTTAAACGGCCGTTCAGGG AAAGGAAAGTGTAGTCCGTATAAAATGAAAAGATGTGATTTTGTTCACGT TTTATATTAACCTGTTGTAACAAAGCGTTGTTCTGTAGGTGACATCGGGC ATTATGACGACAAGGGATACTTCTACATTGTAGCTCGTCTTAATGAGCTG ATCAAGTATAAAGGCCTGCAGGTATATTGCATTTCATTCATCTACTTCTG TGTCTCCGATATATGTTTAAGCAAAAACAGTCACTATTTTTAAACAAACG CTTGAAGTGAACTATCTGGGATTGGGTATTCGTTTTTGGCACGATATGCT TAACACCTAATTCAAGTACGAATACAATAGTGTTTTGTTCTATTTCTAAA ACATCAAAATACTAATTGAATGCTACGGGATCATTGATGTCATGCAGTAG ATAACAAAATGTGTGGCAAATTAAGAATTATGAATATTCCCCACCATTAA AATATAATGTGAATATAAAGAATAGTGGCTATTAGATTTTAATCCATCAC CTCCAGCAACTTTACATTATATCAGAGAAGATTAAGGGTTTTATTACTGT CAGTATTGATTTGAACAGCTATGCATCTGCCTATAGACTGTCTTTTTGCC TGATATTATAGAGATAAAATAAATGGAGGCAGCTATTTGTATTCCAGTTT CTGTATCTGTTACAGTGAGCGGTACCTCAAATTTCTTTAGGCATGTTCTG GCACTCTTATATGACCTTTATTAAACAGTTATATCTTAAAGAAGAATACC TATATAAATGCAATAAAGGTTATATTGCATATACAAGTGAAAACATTTGT ACACTTGAGCTACGTTACTTTAGAATGCAAATGAGGGACGCTAACATGGC GGTCAAAAAAAAAAGATTGTGAGCCAAAACCATATATTACTACCATAGAT AGTCTTTCCTTCCTAGGGTGGCAGATGCAAAAATGAATGCATGTTACACC ACGCCACACTAGAAAAGACAACTACAATTGTCCTGCACGTAACTTTTTCC TGATTTGAAGCTGTGGTAACTGGGTACCACAATGGAAAAGAAGGAGTGGA GGGAAAACAGCCATGAGAGACCTGGAGGAACTGGACTTCACTTGGGAGGG AGTGAGAAGACAAGCTCTGGAGTGTGGAAAGCAGCGGTGGCCCGCATCGT CGACAGATGAAAGTGGCGATGATGACGATAAAAGCTGTCAATGAGGCCCA TTTTTCTATATTGCAGGTGAAACCTGCGGATTTAGAGGCCGTTCTGCTGG GTCATCCTGGTGTCCAGGACGTGGCGGTTATCGGCGTGCCGGACGAGCGG GCGGGAGAAGTACCCAAAGCTTTCGTGGTCAAAAAGACAGACGGCGTCAC GGAGAAGGAGATCGTAAACTTTGTGGCAGGTGCTTCAAATCTTTCAAATC TTTATTCGTTTAGATCAACATGGCAGAAATACACTTCATTGATACAATAT ACGCGTACTCATAGCATCCTGAATTGCGTTGACCTTACAAATCAAATCTA TACACATGATATGAGCACTGGGTGAAAACTATAACCATTAAACCCAACAA CACTATGACACAGTCTGCCTTTTTCTATTGTACAGACAAATAG

Coding sequence (CDS) from alignment at Sc0000509:82293..85585-

>Blg02145.0 ID=Blg02145.0|Name=Blg02145.0|organism=Branchiostoma lanceolatum|type=CDS|length=618bp|location=Sequence derived from alignment at Sc0000509:82293..85585- (Branchiostoma lanceolatum)
ATGGTGGACCAGTATGACCTGTCACATGTGAAGGACATCATGTGCTCTGC
TGCGCCGATGGGCATAAACCTGACCATGGCACTAAGAGATAGAATGAAAC
CTCAGACTCTGAGACAAGGATACGGAATGACAGAGACTAGCCCCGTCACA
CACGGTGGTGTGGAAGATGAGTTCGTGCCTGGGTCAGTCGGTGTCATCAT
ACCTAACACGGAGATTAAGGTGATCCATACAGAGACTGGAGAAGCTCTTG
GTGAAGGAGAAGACGGGGAAATCTGTGTCCGGGGACCGCAGGTCATGAAG
GGTTACCTGAACAACCCTGTGGCCACGGCTGGGTGCATTGATGGCGACGG
TTGGTTCCACACGGGTGACATCGGGCATTATGACGACAAGGGATACTTCT
ACATTGTAGCTCGTCTTAATGAGCTGATCAAGTATAAAGGCCTGCAGGTG
AAACCTGCGGATTTAGAGGCCGTTCTGCTGGGTCATCCTGGTGTCCAGGA
CGTGGCGGTTATCGGCGTGCCGGACGAGCGGGCGGGAGAAGTACCCAAAG
CTTTCGTGGTCAAAAAGACAGACGGCGTCACGGAGAAGGAGATCGTAAAC
TTTGTGGCAGACAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02145.0Blg02145.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02145.0-exon-Sc0000509-1570713199:85452..85585Blg02145.0-exon-Sc0000509-1570713199:85452..85585Branchiostoma lanceolatumexon
Blg02145.0-exon-Sc0000509-1570713199:84988..85088Blg02145.0-exon-Sc0000509-1570713199:84988..85088Branchiostoma lanceolatumexon
Blg02145.0-exon-Sc0000509-1570713199:84602..84746Blg02145.0-exon-Sc0000509-1570713199:84602..84746Branchiostoma lanceolatumexon
Blg02145.0-exon-Sc0000509-1570713199:83715..83797Blg02145.0-exon-Sc0000509-1570713199:83715..83797Branchiostoma lanceolatumexon
Blg02145.0-exon-Sc0000509-1570713199:82507..82669Blg02145.0-exon-Sc0000509-1570713199:82507..82669Branchiostoma lanceolatumexon
Blg02145.0-exon-Sc0000509-1570713199:82293..82300Blg02145.0-exon-Sc0000509-1570713199:82293..82300Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000509genomeSc0000509:82293..85585 -
Properties
Property NameValue
GeneIDBlg02145