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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000142:633763..640960+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02160.1 ID=Blg02160.1|Name=Blg02160.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7198bp|location=Sequence derived from alignment at Sc0000142:633763..640960+ (Branchiostoma lanceolatum)
CAACAAACAAACAAAACAAAACAAAAGAAAACAGACAGCTGTGAATTCCA
GTGAGTTTATTTTGTTGAGCTTGATGTGATATAATTTGTAAGCCCACAAT
TTAAATCCTATGGCTTCTCCGGGTCGCTGGGTACGAACGTGACCTCAGAC
AATGTTGTTGTGGGTTAATATTTGTTAACGTGAGAGGGCAACGGTCAAAT
TTTGCGGTGGGCACCTAGATGTTAGCTCAGTGTCAAGTCCTTAACAACAT
GGCCGAGAAAACGAAGGGGCACACAAAATACAGCAAAAAAGTGACAAGGC
GCGCCCTTGTTGGTGCTGTTGTTTCTGTTGTTCTAGTGACGGGGGCTGTT
CTTCTTGTGTACTTCTTGACGACTACCATGGGTGAGCACATCTTAGTTGT
AACGCCCTCTTTTCACTAGGGGCAGCGACAGAAGAGCGACCAAACATTCG
ACACAAAGAATTGCATAGATAAAGAACGAATATTCTTTTTACGTTTTGTG
TTTTGCTGTCTTTTAAGTCCTTTTTTACATCGTGCATCATATTCCAATTC
TAGGTGCAGGGTCATACTTATTCGATCTTGGTGGCTTAAGAGCAATTGCC
GTCAAGTTTAAAGTGGTCTAACGACACGGAAGTGAACGGCCCGTTGTCTT
GAACGACGGTTGCTGTAACCAAGTTTGAACGTCTTTTTGTTTACTTGTCT
TTGAATGCTGCGCAGAATATAACGTTATTATCCAAGGTTTGTAAAAGGTA
AAGTTAGTCCCATATTTTTTTAGGCCATAGGGGCATGCAGTGTGTTGTTG
ACACTGTGTCTAGGGCACGGTATTAGAAGGCGGAGCCCATCCCTTTCCTT
CCACCGTCTTTTACCTTGACAACCGAAGTCAGGTACCCATTTTTACAGAA
GATGAAGTGCACGATAATTTTACATCGTACAATGTACGGCAACAATTATA
AAGCATAGTACAGAATAGAGGTATAGAATAAAAATTACTAATTCTGGATA
GAAATGTCGTGTTAAGCCTATCTAGACCGGGCTTTTTTTAGACTTCTGGA
CGGGGGGGGGGGTCATTCGCCCCGCCCCTCCATCATAACTTCCAAACGGT
ATGGCGTATCATCAACAAATTTGTAGAGAGTGATGTGCATGTGAAGTTGT
TTGATTCCTGCAATTTTGGTTCTGTTATCACCAAAGTCTTCGAAATTTGA
AAAATATGCCATGGCAACACAGAAAATGATAAACTTATACTATTACTATA
GAATTGTTGCCAACTAAATTCTAGGAAATGTCACCAAGTTTGGTAGTCCT
AGCACACATCGTTCAGGAGGTATATGACGTCAAAGTTGGCGCGGGCACTT
TTACCCCCCCCCCCCCCCCCCCCCCCCTAGATAGGTTTAAGTGTCTTTTT
CAAGGACACGACATCTTGCCTTTCCAGCCAGAAATGCCAGGAATCAAACT
CGTGACCTTTTGCTCTTATTTCCACTAGCCTAGCTACTCGGCGATTCGAC
TCCGCTATACTCCAAATGTGAACTCAAAACCACCGCGAACATTCAATTTG
ATCCCTACCGCGAAATTCAATCTCCACAAACATTTCTGCATTTGCAGTAT
GATCTGATGATTGGCTACCCTTTTTTTTTTAGAATTGAATGTATTTTTCA
ACCATGTATCGAATACAGATGATTTTGAATGCTAAACAGGTGTGCCTTAA
CAAAATAAAATAACATTATTTGAAAAAATACCCATTTGACTTTGCACATA
TGTAGCTCTTGAGTAGTCATCATGACGTTATGATATTGTGCATAAATGAT
TGTCTCGTAACAAGCTAATTAGCTTAGTACCTGGAGAAAAAAATCAAGAC
CCATACATAACACTAAGTAGTACTGTGTTTTTAAGACACCCCCAGAAGTG
CTCAGACATACTTGGCGACCACCTTTACCACCTGGTAACTTTTGATATTC
CTGACAATTATAGGAAAACTAATAATCTACTAAGGTCTATGTAGTACACC
CTCCTAAAAGCAGGACCCCTATCGCTCGCTCGCGTTGGCTCGCTCGCGTA
GGGGCCCTGCTCTTTAGCCCCGGTAGACACGGTTCTGGCGACGTTACTGA
CAGTTGCTCATGAATTTATAATGAGCTATCCTTATTTGGCACAAGTTTAA
TATGTTCTGAACCTAAAGTAACGATGTGAGACGTAACCTGATTGGTTGAT
AGCTTCCAGCGTCCTTTGCGCTTTCGCTCTAGATGGGGTTTAGCAAACCC
TCTGATTGGCTGAAGCTGTTTTGGTGGCCACGGCGCCAGAACCGTGTCTA
CCGGGGCTAAAGAGCAGGGCCCCTAAGCGAGCGAGCCAACGAATCGAGTG
ATAGTGGTCCTGCTTTTAGGAGGGTGATGTTGTACAGATGGGACTATATT
TGCTAATCATAAAGCCATGTAAGTTTAAACACGTATATTTCAGCTGAGTC
TGAGATCACCATTATCAGCCGAGCGGAATGGGGAGCGAGACCCCCGAAGT
CACGTGTCAACATGACGTCACCTGTACCTTACGTCATCATCCACCACAGC
TACGAACCAGACGTGTGTTTAAACAGGTCCCAATGNGTTTGAACAGGTCA
CAATGTGAGAAGTATGTACGGGGCATACAGGTAAAAGCAACTTATTCAAA
CTTGGTTATATTAATCAAATGCTTTCAAGTTTGCTTCGAGTTGGAACAAA
GTAAGTGTATGATAAACTCTTTCCATTGATAATACAAATTAGATCCTGAT
TTACATAATGAGCATCTAGGTTTTAGCAATTATTGTTCAAGCAATCTACA
AACTAAAAACCATGACGATTTCTCAACCCCTTCTTGAGTTATTTTCTTCC
AAAGTCTGAAACAAAATCGACACCTGCAATTTCAAAAAGGCGGATAGGGG
CCCAAACTGACACCACTTAATTCTCTATCCCAAGAGCTGGCTACCACTCC
AAAATCACGACCGTCGCATGTCCAAAACACGGGATTTCAAAACCGGACAT
TCCGCTGCAGTATCGTGGAAGGCAGCTAGAAGGCCCATTATCGAACTTAC
CCTTCGTTTTCTTGACCCCTACCTACATACTAAATGCCTTAAGGTTCCAC
CCATAGCTTCTCGAATTATGCTGTCCACTAACACACAGACAAACGGGACC
GAAAAAATGATATAATATTCTTGGCAATAAGTTAATAAAGATTGTGCGAG
CAAAGCAAAGCAAAGCAAAGCTCAAGCTTGAAAATCTGCTAAAAAAAGCA
GAGGTATTTCCCTTGGTGACTGCATCTACATACAGCGCCTCCTTTTAGAG
ACAGAAGTACTGCAGTCTTATCAATGAGTTGCCGATTGTATCCAAACTAA
AATCATTAAGCCCCTGTCACACTTGTGCGTATAAATAAGTCCGCATGAGT
TGCGTATTAACATGTTTTTGGTTTCGGTTAAGTTTGCAGCCGAATAAGTG
ATTTCTTAGGTTCGGTCACTAGGCTACACAACGGTGGATGAAAGTAGAAA
ACATCTTTTTACCCGCAAACTTTACGTAAACAAAAAAAATGTTAATGCGC
AACTCACGCGCACTTGAATATACGCACAAGTGTGACAGGGCCCTTAGAAT
GCAGCGGCCAAAACCTATATTCATCGCTGTGTTCCATGCCAACCTATGAT
TAATATATAAAAAGAATATATATAGAGGAATACCTTTAAATTGATTGTAT
ACCCAGAACTTCCACATGGACACCCGTGGCTGGGATGACATCGGCTACAA
CTTCCTGGTTGGCGGGAACGGAGACGTGTTTGAAGGGCGGGGGTGGGACG
TGGTGGGGGCCCAGGCCGGGCCTGACTGGAACAGCCGCTCCATCGGTAAC
GGTTTTCAAACACAAATACTTTACCTCAGGAACGTCGACGTCATTCATCC
TAGGATGGGTCCCCAGATAGTACGAAATGGAACGAAATGGAACGAAATGG
AACGAGCAATATAGAAATGGCCTTTTCAGAGGTTCCATTGTATCCTGGGA
GACGTGGGGCACTATGGGTAGCTTGGAGGGCAAACCATGACAACATAAAA
CAAACCGGACACAATATGCAAGCACCGCGTTCGCCTTATAATGGTAACGA
TGTTGCCTGTGCTACCCATAGACTAGTTTCCCAGTTCTTCCAGCATGCAT
TTGGATCCGTGAAAAGGTTTATGGGTAAATGTACGTAGTAGCGAGTTCTT
CTCATCTGTCTTTGTTTTTCTTGTCCCCAACCCTGTTTCAGATGAAATAA
TGTGTACAATGGGTTAGTACCCTGTAGCTCATAGTGCCTCTTATATTACA
AATGAGAAAATATGCTTGCTGACGGAAAAACTTGTACTTCTAACCAGGGA
TTTGTTTTATCGGAAACTTTACTGACAAGCTGCCCCCGAAGGAGGCCATA
TCGGCAGGAAAAGCGTTGATTCTGCTTGGCGTGGAAAAGTAAGTGATCTT
AGAATTTTGAATTTATGACGTTTTAAATGCGCTCAAAGGTCTCTTAGATT
AGCTCACAATAAGGACAATAAGAACCAGCGAAAAAATGTTTATGGCAACG
ATGCGTAAAGACAATTAAAGAGTGACTATACGACACGCCTTTAAGGGTGC
TTTACGTGTTTTGAAATATCATTTTCCTTACCGTAAAAATAAGCAACTAG
GTTCTCTCTCTTTCTAGTGACACGTGATGGTTGTGTATCGTTAAATTTAT
CTTGATAAATACGTAGCAGCATCATGCAGTAGCATCATCCGGTAGCATGC
GTAGTCTAGCTTCTGCTTACCCGTCATATACACTACTGTACCGGAAAGGG
TTGCAGTCCTTAAGCCCCCGTCACAAATAAGAAATTCAGCTCGGCCGACG
TGTTGCCGAGCTTCAAATGTGCATTTGCGATTTTTAGAAATCAAAGTTGA
TCCAAATATTAGCCTTTCACCAGGTTAGTCGATTCTGACTTCGTCCATGT
CCAAGAGGTGGTACCATCTCATGGGGGATTTCTAGTTTTTAGTGTTCCAC
GGACGTCACCCGAGATTTTCATTGGAAAATATGGTCGGCGCTCGAGCAAG
TTTGAAATTCGGCGAGCGTCGGGCGATCTACAAATTCGGCCGACGCTCGC
ATGAATTGTGACGCCGGCTTAAGGACGGGGCATTAATTATAAGCCGCGGT
GCACTATTATTGTGATTTTCGAAATATACTAGGAGAATTTCCCTGGTACA
ATTAACCTGTAAAGGCTGTATACAAAACAACATGTACATGTTTATCTTCG
GTCTTCTCTGTCACGAGCAGTAGAAGAATAGCTCTTCAGTGAGGCAGTTT
TGTTCGAGATCACTTTCATTTTTCACTTTCATTCATTGTAGAAAGAAGGT
GGTGACCAACTACACCCTCTACGGCCATCGTCAGGTCCGGCCCACAGAGT
GCCCTGGGAATGAGTTTTTTAGCTGGTCACCCAATGGGACCACTGGGTAA
GAGATATCCAGAGAAAACAACGGTCACTTTGACTTTGTTTGTTTGTTTGC
TTGTTTGTTTGTTTGAACCTTTGTTTATTCATGATAAGCTCAAATCGGCA
CGCAGGCCGCTTTTCATTGAGGTCGTGAGGGAAGAGATAACGGTCAGATA
CAATATAACAGAGATAGACAGTCATTTGAGTCCAAATAGCTCGATCAACA
TATATCATTACATATTTATGGTACAACAAGATACAATTGCTACAACATAC
AACATATAGTAGGGCGAAAGCTGGTTCATGGTCCGTGTCCGTTCGTTTTG
TTCATTTCCGTTACTTCAAGAGTCTCTTAAAGGAAGTCAGATTCAGAGCC
GTACGGATGTCTAGCGGTAGGCTACCTAGACTCTACCAGTCTCCACGGGT
CGCTGGGCTACTGATCTTCTGAAGATCTCTAGCTTGGGTTTGGGGGCAAC
CAGCTGACTACTTGTGCTTTATCTGGTTGTCCGTGTACTTTGGTCTCAGC
AGTACACAAACATCTGGCGCATGTAGGGTGCCAGTTTGTTGTTTAGGGCT
TTGTAGGACTTATAACGACGAAACGACAAAAGAAACATCTGTCGACGGAT
TTCTTGTTGTTGTTTTTCTTCTTCTTTTTTCTGTTGATTCTAGGAGATGT
GACGATATCTTTTCTCTCTTATCAAATGCAGAAACCAAGAAACTACACCG
CTGAGTAGCCTGCTATCATCAAGAATGCTGACTACTACATTTTCCTCGGA
ATTGTTGAGTCATACTGTCATTTTTAGCCGACTCAAGAGACCTATTTTTC
ACCATGTAGATGCAACGATTTATGTTGTTTTTAGGATTTACGACAGATGA
ATTAAGGTCTCACACGCCAGTTTGGCCATCCCATAGGAAATAACGTTGAA
ACACGAACCTTTCATGGCCATAATTCCAATAAAAACACGGAGTTTCCGGA
TATGTTTTACTTTCTATTGCAAGCACACACGATCTTTAGACAACGAAAAA
ATTGTCACCAAAATATAACCTAGTGAGCGATCTGTAATGGCATTTAAAAC
TGCCGTTACCTGCCAGCCGCAAGAGGCTTCTGGTGCCGAGAGAGCCCGAC
CGTATACGTAGTACTCAGGTCAAAATAGCCCGTATGTCCGACAATCGCTT
GGATGCTGAAACTTTCCTGCCTTATCCTGTCAGAGATGAACAAGCTTTCA
TCTCAAATGCTTCTTATATCAGGTGGGATCGATCAAAGGCAAATTATCAT
CGACTTAAACACCTGACTTTGGGGCCCAATTATTTTTTTAGCCCTCACTC
TTTTGGCATCTACACGCGGAGAAATTCAGGCATGAGACCTTAAGGTTACC
AAGAAACCCTTGCCCTGTTCGATTAGAAATAAAATTAATAATGCATCATA
GTCTCCCATCTAGACACGCACACACATGTACTTACACCATCGTCCATTTC
CATTAAAAAAATCTTTTCTGTTTTTGTGATTTTTTGTTGCTATATAATCA
TAAATTATGCAAAATGATTAAAAAATCACAAATTTACACTAAGATAGTAT
TAAAAAGTCGGTATCTTACTTTTCTACGCAATAATAACTTGTTGCTATAA
TGGCGACGATAAAACATCTGAGTTTCTTTCATATTACCCAATGCAGAATG
CAAGTACATCAGGGTTCCACGTATTTACATGAGCCAGTCAGCATTTTCCT
GATGAAGATAGTCATCAAAACGTTGGCGCTTCTAAATACTTGGTTGTG Coding sequence (CDS) from alignment at Sc0000142:633763..640960+ >Blg02160.1 ID=Blg02160.1|Name=Blg02160.1|organism=Branchiostoma lanceolatum|type=CDS|length=834bp|location=Sequence derived from alignment at Sc0000142:633763..640960+ (Branchiostoma lanceolatum)
ATGTTAGCTCAGTGTCAAGTCCTTAACAACATGGCCGAGAAAACGAAGGG
GCACACAAAATACAGCAAAAAAGTGACAAGGCGCGCCCTTGTTGGTGCTG
TTGTTTCTGTTGTTCTAGTGACGGGGGCTGTTCTTCTTGTGTACTTCTTG
ACGACTACCATGGCTGAGTCTGAGATCACCATTATCAGCCGAGCGGAATG
GGGAGCGAGACCCCCGAAGTCACGTGTCAACATGACGTCACCTGTACCTT
ACGTCATCATCCACCACAGCTACGAACCAGACGTGTGTTTAAACAGGTCA
CAATGTGAGAAGTATGTACGGGGCATACAGAACTTCCACATGGACACCCG
TGGCTGGGATGACATCGGCTACAACTTCCTGGTTGGCGGGAACGGAGACG
TGTTTGAAGGGCGGGGGTGGGACGTGGTGGGGGCCCAGGCCGGGCCTGAC
TGGAACAGCCGCTCCATCGGGATTTGTTTTATCGGAAACTTTACTGACAA
GCTGCCCCCGAAGGAGGCCATATCGGCAGGAAAAGCGTTGATTCTGCTTG
GCGTGGAAAAAAAGAAGGTGGTGACCAACTACACCCTCTACGGCCATCGT
CAGGTCCGGCCCACAGAGTGCCCTGGGAATGAGTTTTTTAGCTGGTCACC
CAATGGGACCACTGGAAACCAAGAAACTACACCGCTGAGTAGCCTGCTAT
CATCAAGAATGCTGACTACTACATTTTCCTCGGAATTGTTGAGTCATACT
GTCATTTTTAGCCGACTCAAGAGACCTATTTTTCACCATGTAGATGCAAC
GATTTATGTTGTTTTTAGGATTTACGACAGATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02160.1-exon-Sc0000142-1570713199:633763..634143 | Blg02160.1-exon-Sc0000142-1570713199:633763..634143 | Branchiostoma lanceolatum | exon |
| Blg02160.1-exon-Sc0000142-1570713199:636206..636338 | Blg02160.1-exon-Sc0000142-1570713199:636206..636338 | Branchiostoma lanceolatum | exon |
| Blg02160.1-exon-Sc0000142-1570713199:636359..636392 | Blg02160.1-exon-Sc0000142-1570713199:636359..636392 | Branchiostoma lanceolatum | exon |
| Blg02160.1-exon-Sc0000142-1570713199:637469..637607 | Blg02160.1-exon-Sc0000142-1570713199:637469..637607 | Branchiostoma lanceolatum | exon |
| Blg02160.1-exon-Sc0000142-1570713199:638110..638200 | Blg02160.1-exon-Sc0000142-1570713199:638110..638200 | Branchiostoma lanceolatum | exon |
| Blg02160.1-exon-Sc0000142-1570713199:639104..639208 | Blg02160.1-exon-Sc0000142-1570713199:639104..639208 | Branchiostoma lanceolatum | exon |
| Blg02160.1-exon-Sc0000142-1570713199:639894..640960 | Blg02160.1-exon-Sc0000142-1570713199:639894..640960 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000142 | genome | Sc0000142:633763..640960 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02160 |
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