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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000142:629725..638409+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02160.8 ID=Blg02160.8|Name=Blg02160.8|organism=Branchiostoma lanceolatum|type=mRNA|length=8685bp|location=Sequence derived from alignment at Sc0000142:629725..638409+ (Branchiostoma lanceolatum)
CTTTGATCTGTAAACAGGTTGCACACGACATGCGGAAGTATGACAGCACT
TCACAAGAGGAAGTTAAGATTAGTTCCTCTGCATACAAAAGTTCCTCTTT
TTTTTTAGTTCCGCCAGACGACTAGAAAGAAGTGTAACGTTTCGAGGACT
GTCAGATCTTCAACATGGGTAAGATTGTCCATTTTGGTGTGTGGATCGGC
ATAGTATTCGTGGTGACCTGTGTTAGAACGATGGACACCGCAGTTGGTAA
GTGCCCGATTTCTGTTCTGGTGTTACTCGTATTAGAACAATAGAATGTGA
CAAATATGCAACACTTTTTTTGTTTTTTTCCTTCAAATTTTCCAGGGACA
TGTTTATGCCAGCCTCAGGTACTATTAGTCTTATCTGAGAGCGCGCGCGT
GTACACACAATGAAGCACACACACGAACACATACACACACACACACGCAC
ACACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACAAACACACATACAAATGCGCGCACACACACGCAAACTGAGTCTC
CCTCTCTTTCTCTCTCAAACGCACAATGAAGCACACACACACACACACAT
GCACACATGCAAGCGTGTCACGAATACTACGAGTTTTTTTATTGGTCAGA
AATTACTCGCAATGGCAGCCTTTCTAGCGCTGAATTGCTGCAGGGTTTAC
AGGTTTCACATGATATACAACATATACATATACATATCTTATCCACACTT
GCATTTGTGGAATTGTCGCAAGGGTCTGGGCGGCTGCCATTCGGTGCCAC
CAGGTGACCTCAATATGACCTTCCCAACCGAAGTCAGGTACCCATATCAG
GTACCCATATATGTACCTGGGTGGAGTGAGAATAGTCGTGTAAAGTGCCT
TTTCCAAAGGCACAAGATCGGTGACATGACAGGATTCGAACTCGGGACCT
CTTGGTTCTGAGCCGAACACTCTGCCGTTGCGCCACACGACCACACTCAA
TTACTTAGTAATATGACGCTTCGACACCGTGTAACGTGAACAGAAGACAT
AATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGG
CTTTAGTTCACCTTTATTTGCTGGGTTTCCTTTATCCGTTGTTAAAAAAA
AATACGGGGTATTTAGTTATATAAGCTAAATGCAACAGAAGTAATACTAG
CATTACCCTGCATATGTAAAATAATACACATCTCATTTTCCTTGCTGAAC
TCTCAACAGTTTTTCTTTTACAGCTGCCAGGGAAGGGTGGAGTGTAAATC
GGGTGAATTCCGTGAACTTAAAGGCGCAAACTGTTCATTATTCCCATTGG
CGAAGAGGAACGAAATTTTGCATACTGATTCTAATATCTGCTAAGTTCGC
TACGTTTACGTGGTATTAGTCTACGAAAATGTCAGATTACTACACTGTGT
ATTCTGAGTCCTGAAGACCGCTCTGCATGAAACTGACCCTACTTTCACAC
CTTACTTAATCATAGCAGCTGTCAGAGAAAAACTGTTCAGAAATGTGGGG
TCGTGTGGCGCAACGGCAGAGCTTTCGGCTCAGGACCAAGAGGTCCCGAG
TTCGAATCCTGTCATGTCACCGATCTTGTGCCCATGGGAAAGGCACTTTA
CACGACTTTCCTTACTCCACCCAGGTGGAAATGGGTACCTGACTTCGGTT
ATGGAAGGTCGTATTGAGGTCACTTGGTGGCGCCGAAAGGCAACCGCCCA
TACCCTTGCGACAGTTCCACAAAGTGCAAGTGTGGAGCAAAAAATGTATC
TGTTGTATATTATGATCTATAATATGTAACCTGTAAACCTGCATCAATTC
AGCGCTACTAGGCTGACGTTGCGGGTGATTTCTGACCAATAAAAAATATA
GAAAATGAAAGGGATGATGTGACTTGTCTATGTATATGTCACAGTAGAGA
TTGGAATCCAGTAGAGTCCGGAACTCTACTAGTAGAGATTGGAATTCCAG
TCTCTACTAGTAGAGATTGGAATTCCAATCTCTACTAGTAGAGTTCCGGA
TTCTCTAGTAGAGATTGGAATCGGGATCTGAATATTGGGATTCCAATCTC
TACTAGGAGAATTCAATATTCTACTCGTAGAGATTGGAATTCTACCAGGA
CAATCTACAATTCTTAAAGGAGAAATTCGGATTGCATCGAAAATATTTTG
GAAAATAGACTGAATCATTTCACACAGGACACCTAAGATTTCAGCATAGC
TAAGCCTACATTCACCATTACTATTTTAGGTGATTTACTTCATGTTTTAG
ATATCTGATAACTTTGACATCAACTTTGGAACTGGCTTGGCAGGGGTGAA
TTAGCTCTTATAATATACCGAGTCACTAACGAACTGGAAAAACTGGTTGA
GCATATCGAGTCACTACGTTACTAACTCATAATGGCCGTATGCAAATGTC
TCTCATTGACACACATTATCAGTGGCATTTATAAATAGCCATTGACTAAG
GTTGGACCAGACGGCTATCCCCATGGTTGCAATGTGTCTTGACAGAAGGT
TTATTAGATATCTAAAACATAAAAGTGATTCACCTAAAANGATTAACCTA
AAACAGTAATGGTGAATGTAGGCTTACCTAGTTTGCTAAATTTTAGGTGT
GAAATGATTCAGTCTATTTTTAAAAAAAAATTGGAAGAAATACAAATTCC
TCCTATTAGAATTGGAGATTGTCCTGGAAGAATTCCATTCTCTACGAGTA
GAATATTGAATTCTCCTAGTAGAGATTGGAATCCCAATATTCAGATCCCG
ATTCCATTCCAATCTCAACTAGTAGAATCCGAAACTCTACTAGTAGAGAT
TGGAATTCCAGTCTCTACTAGTAGAGATTGGAATTCCAATCTCTACTAGT
AGAGTTCCGGACTCGTAGAGTTCCGGACTCTACTGGATTCCAATCTCTAC
TGTGACATATACATCTTTATACACGTGTAATTCGATGTAAAATGGTAAAG
GTTATCCTATAGACTTTTTGAGGCCGATGACAGTTTTTACTCACTGGATC
TATCCTGGAATGCCAGGGATCAAAAACGTGACCTCTTAAAGAATGGTTTT
TATTGGTCAGAAATTGCCTGCAATGGCAGCCTTTCTAGCGCTGAATTGAT
GCAGGGTTTACAGGTTTCACATAATTTACAACATATACATTATATACATA
TCTTATCCACACTTGCATTATGTGGAACTGTCGCAAGGATCTGGGAGGCT
GCCAACCAGGTGACCTCAATACGACCATCCCCAACTGAAGACAGGTACCC
ATTTACACCTGGGTGGAGTGAGAAAAGTCGTGTAAAGTCTGTGAAAGTGC
CTTCCCCTAGGGCACAAGATCGGTGAACTCGAATTCGAACTCGGGACCTC
TTGGTTCTGAGCCGAACGCTCTGCCGTTGTGCCACACGACCCCACCTCTT
GATCTTGTGTCCACTAGCTTAACCACTTGGTCATTCAACGCCACAGGCAA
ATTCATGTAGGTATCTTTAAACTCTCATTTTAATCAGCATGTAACGATCT
AGACTCTTTAGACAGGCTTATGTTCGTGGGGAGGGGGGTTTCAGCTGTTG
CAAGGTTATCGATTCTGCCGGATGATCAGCAAAGTTCTGAAATCACCCTT
AACCTCAAATCACGCTCCTCCGCAGCGTCGAAAAAAATAGATCGTCAGCT
TTCCCCACCCATTGCAGTGTTGGAGCCTAAGCGAACTCCCTCTCGTGGCA
AACTCCCTTCCGTGGCATAACTCCCCTTTGTGAAGGGGTAATCTTAACTG
CGCCAACAATAAGGTTCTTTGTAAATCTCCGTTTCTTAGAACGTATAACA
ATTGTACAGCATTTTACCCCCCAAAATTGCCAACTTGCGTTTTGTTATAG
GCCGTGCTAGTTAGAAAAAATAACGGTTAAACTAACGATATAGAAGATCG
CCCATACTGGTGTGCACACATAACTACTGAGGATCTATCAACAAACAAAC
AAAACAAAACAAAAGAAAACAGACAGCTGTGAATTCCAGTGAGTTTATTT
TGTTGAGCTTGATGTGATATAATTTGTAAGCCCACAATTTAAATCCTATG
GCTTCTCCGGGTCGCTGGGTACGAACGTGACCTCAGACAATGTTGTTGTG
GGTTAATATTTGTTAACGTGAGAGGGCAACGGTCAAATTTTGCGGTGGGC
ACCTAGATGTTAGCTCAGTGTCAAGTCCTTAACAACATGGCCGAGAAAAC
GAAGGGGCACACAAAATACAGCAAAAAAGTGACAAGGCGCGCCCTTGTTG
GTGCTGTTGTTTCTGTTGTTCTAGTGACGGGGGCTGTTCTTCTTGTGTAC
TTCTTGACGACTACCATGGGTGAGCACATCTTAGTTGTAACGCCCTCTTT
TCACTAGGGGCAGCGACAGAAGAGCGACCAAACATTCGACACAAAGAATT
GCATAGATAAAGAACGAATATTCTTTTTACGTTTTGTGTTTTGCTGTCTT
TTAAGTCCTTTTTTACATCGTGCATCATATTCCAATTCTAGGTGCAGGGT
CATACTTATTCGATCTTGGTGGCTTAAGAGCAATTGCCGTCAAGTTTAAA
GTGGTCTAACGACACGGAAGTGAACGGCCCGTTGTCTTGAACGACGGTTG
CTGTAACCAAGTTTGAACGTCTTTTTGTTTACTTGTCTTTGAATGCTGCG
CAGAATATAACGTTATTATCCAAGGTTTGTAAAAGGTAAAGTTAGTCCCA
TATTTTTTTAGGCCATAGGGGCATGCAGTGTGTTGTTGACACTGTGTCTA
GGGCACGGTATTAGAAGGCGGAGCCCATCCCTTTCCTTCCACCGTCTTTT
ACCTTGACAACCGAAGTCAGGTACCCATTTTTACAGAAGATGAAGTGCAC
GATAATTTTACATCGTACAATGTACGGCAACAATTATAAAGCATAGTACA
GAATAGAGGTATAGAATAAAAATTACTAATTCTGGATAGAAATGTCGTGT
TAAGCCTATCTAGACCGGGCTTTTTTTAGACTTCTGGACGGGGGGGGGGG
TCATTCGCCCCGCCCCTCCATCATAACTTCCAAACGGTATGGCGTATCAT
CAACAAATTTGTAGAGAGTGATGTGCATGTGAAGTTGTTTGATTCCTGCA
ATTTTGGTTCTGTTATCACCAAAGTCTTCGAAATTTGAAAAATATGCCAT
GGCAACACAGAAAATGATAAACTTATACTATTACTATAGAATTGTTGCCA
ACTAAATTCTAGGAAATGTCACCAAGTTTGGTAGTCCTAGCACACATCGT
TCAGGAGGTATATGACGTCAAAGTTGGCGCGGGCACTTTTACCCCCCCCC
CCCCCCCCCCCCCCCTAGATAGGTTTAAGTGTCTTTTTCAAGGACACGAC
ATCTTGCCTTTCCAGCCAGAAATGCCAGGAATCAAACTCGTGACCTTTTG
CTCTTATTTCCACTAGCCTAGCTACTCGGCGATTCGACTCCGCTATACTC
CAAATGTGAACTCAAAACCACCGCGAACATTCAATTTGATCCCTACCGCG
AAATTCAATCTCCACAAACATTTCTGCATTTGCAGTATGATCTGATGATT
GGCTACCCTTTTTTTTTTAGAATTGAATGTATTTTTCAACCATGTATCGA
ATACAGATGATTTTGAATGCTAAACAGGTGTGCCTTAACAAAATAAAATA
ACATTATTTGAAAAAATACCCATTTGACTTTGCACATATGTAGCTCTTGA
GTAGTCATCATGACGTTATGATATTGTGCATAAATGATTGTCTCGTAACA
AGCTAATTAGCTTAGTACCTGGAGAAAAAAATCAAGACCCATACATAACA
CTAAGTAGTACTGTGTTTTTAAGACACCCCCAGAAGTGCTCAGACATACT
TGGCGACCACCTTTACCACCTGGTAACTTTTGATATTCCTGACAATTATA
GGAAAACTAATAATCTACTAAGGTCTATGTAGTACACCCTCCTAAAAGCA
GGACCCCTATCGCTCGCTCGCGTTGGCTCGCTCGCGTAGGGGCCCTGCTC
TTTAGCCCCGGTAGACACGGTTCTGGCGACGTTACTGACAGTTGCTCATG
AATTTATAATGAGCTATCCTTATTTGGCACAAGTTTAATATGTTCTGAAC
CTAAAGTAACGATGTGAGACGTAACCTGATTGGTTGATAGCTTCCAGCGT
CCTTTGCGCTTTCGCTCTAGATGGGGTTTAGCAAACCCTCTGATTGGCTG
AAGCTGTTTTGGTGGCCACGGCGCCAGAACCGTGTCTACCGGGGCTAAAG
AGCAGGGCCCCTAAGCGAGCGAGCCAACGAATCGAGTGATAGTGGTCCTG
CTTTTAGGAGGGTGATGTTGTACAGATGGGACTATATTTGCTAATCATAA
AGCCATGTAAGTTTAAACACGTATATTTCAGCTGAGTCTGAGATCACCAT
TATCAGCCGAGCGGAATGGGGAGCGAGACCCCCGAAGTCACGTGTCAACA
TGACGTCACCTGTACCTTACGTCATCATCCACCACAGCTACGAACCAGAC
GTGTGTTTAAACAGGTCCCAATGNGTTTGAACAGGTCACAATGTGAGAAG
TATGTACGGGGCATACAGGTAAAAGCAACTTATTCAAACTTGGTTATATT
AATCAAATGCTTTCAAGTTTGCTTCGAGTTGGAACAAAGTAAGTGTATGA
TAAACTCTTTCCATTGATAATACAAATTAGATCCTGATTTACATAATGAG
CATCTAGGTTTTAGCAATTATTGTTCAAGCAATCTACAAACTAAAAACCA
TGACGATTTCTCAACCCCTTCTTGAGTTATTTTCTTCCAAAGTCTGAAAC
AAAATCGACACCTGCAATTTCAAAAAGGCGGATAGGGGCCCAAACTGACA
CCACTTAATTCTCTATCCCAAGAGCTGGCTACCACTCCAAAATCACGACC
GTCGCATGTCCAAAACACGGGATTTCAAAACCGGACATTCCGCTGCAGTA
TCGTGGAAGGCAGCTAGAAGGCCCATTATCGAACTTACCCTTCGTTTTCT
TGACCCCTACCTACATACTAAATGCCTTAAGGTTCCACCCATAGCTTCTC
GAATTATGCTGTCCACTAACACACAGACAAACGGGACCGAAAAAATGATA
TAATATTCTTGGCAATAAGTTAATAAAGATTGTGCGAGCAAAGCAAAGCA
AAGCAAAGCTCAAGCTTGAAAATCTGCTAAAAAAAGCAGAGGTATTTCCC
TTGGTGACTGCATCTACATACAGCGCCTCCTTTTAGAGACAGAAGTACTG
CAGTCTTATCAATGAGTTGCCGATTGTATCCAAACTAAAATCATTAAGCC
CCTGTCACACTTGTGCGTATAAATAAGTCCGCATGAGTTGCGTATTAACA
TGTTTTTGGTTTCGGTTAAGTTTGCAGCCGAATAAGTGATTTCTTAGGTT
CGGTCACTAGGCTACACAACGGTGGATGAAAGTAGAAAACATCTTTTTAC
CCGCAAACTTTACGTAAACAAAAAAAATGTTAATGCGCAACTCACGCGCA
CTTGAATATACGCACAAGTGTGACAGGGCCCTTAGAATGCAGCGGCCAAA
ACCTATATTCATCGCTGTGTTCCATGCCAACCTATGATTAATATATAAAA
AGAATATATATAGAGGAATACCTTTAAATTGATTGTATACCCAGAACTTC
CACATGGACACCCGTGGCTGGGATGACATCGGCTACAACTTCCTGGTTGG
CGGGAACGGAGACGTGTTTGAAGGGCGGGGGTGGGACGTGGTGGGGGCCC
AGGCCGGGCCTGACTGGAACAGCCGCTCCATCGGTAACGGTTTTCAAACA
CAAATACTTTACCTCAGGAACGTCGACGTCATTCATCCTAGGATGGGTCC
CCAGATAGTACGAAATGGAACGAAATGGAACGAAATGGAACGAGCAATAT
AGAAATGGCCTTTTCAGAGGTTCCATTGTATCCTGGGAGACGTGGGGCAC
TATGGGTAGCTTGGAGGGCAAACCATGACAACATAAAACAAACCGGACAC
AATATGCAAGCACCGCGTTCGCCTTATAATGGTAACGATGTTGCCTGTGC
TACCCATAGACTAGTTTCCCAGTTCTTCCAGCATGCATTTGGATCCGTGA
AAAGGTTTATGGGTAAATGTACGTAGTAGCGAGTTCTTCTCATCTGTCTT
TGTTTTTCTTGTCCCCAACCCTGTTTCAGATGAAATAATGTGTACAATGG
GTTAGTACCCTGTAGCTCATAGTGCCTCTTATATTACAAATGAGAAAATA
TGCTTGCTGACGGAAAAACTTGTACTTCTAACCAGGGATTTGTTTTATCG
GAAACTTTACTGACAAGCTGCCCCCGAAGGAGGCCATATCGGCAGGAAAA
GCGTTGATTCTGCTTGGCGTGGAAAAGTAAGTGATCTTAGAATTTTGAAT
TTATGACGTTTTAAATGCGCTCAAAGGTCTCTTAGATTAGCTCACAATAA
GGACAATAAGAACCAGCGAAAAAATGTTTATGGCAACGATGCGTAAAGAC
AATTAAAGAGTGACTATACGACACGCCTTTAAGGGTGCTTTACGTGTTTT
GAAATATCATTTTCCTTACCGTAAAAATAAGCAAC Coding sequence (CDS) from alignment at Sc0000142:629725..638409+ >Blg02160.8 ID=Blg02160.8|Name=Blg02160.8|organism=Branchiostoma lanceolatum|type=CDS|length=405bp|location=Sequence derived from alignment at Sc0000142:629725..638409+ (Branchiostoma lanceolatum)
ATGGCTGAGTCTGAGATCACCATTATCAGCCGAGCGGAATGGGGAGCGAG
ACCCCCGAAGTCACGTGTCAACATGACGTCACCTGTACCTTACGTCATCA
TCCACCACAGCTACGAACCAGACGTGTGTTTAAACAGGTCACAATGTGAG
AAGTATGTACGGGGCATACAGAACTTCCACATGGACACCCGTGGCTGGGA
TGACATCGGCTACAACTTCCTGGTTGGCGGGAACGGAGACGTGTTTGAAG
GGCGGGGGTGGGACGTGGTGGGGGCCCAGGCCGGGCCTGACTGGAACAGC
CGCTCCATCGGGATTTGTTTTATCGGAAACTTTACTGACAAGCTGCCCCC
GAAGGAGGCCATATCGGCAGGAAAAGCGTTGATTCTGCTTGGCGTGGAAA
AGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02160.8-exon-Sc0000142-1570713199:629725..629892 | Blg02160.8-exon-Sc0000142-1570713199:629725..629892 | Branchiostoma lanceolatum | exon |
| Blg02160.8-exon-Sc0000142-1570713199:636206..636338 | Blg02160.8-exon-Sc0000142-1570713199:636206..636338 | Branchiostoma lanceolatum | exon |
| Blg02160.8-exon-Sc0000142-1570713199:636359..636392 | Blg02160.8-exon-Sc0000142-1570713199:636359..636392 | Branchiostoma lanceolatum | exon |
| Blg02160.8-exon-Sc0000142-1570713199:637469..637607 | Blg02160.8-exon-Sc0000142-1570713199:637469..637607 | Branchiostoma lanceolatum | exon |
| Blg02160.8-exon-Sc0000142-1570713199:638110..638409 | Blg02160.8-exon-Sc0000142-1570713199:638110..638409 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000142 | genome | Sc0000142:629725..638409 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02160 |
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