|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000142:35519..42874+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02163.0 ID=Blg02163.0|Name=Blg02163.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7356bp|location=Sequence derived from alignment at Sc0000142:35519..42874+ (Branchiostoma lanceolatum)
ATGTGGATAAGGCGCAGTGATACTGCTGAGAGTCTGTTCACACAGTTTTT
GTCGACAGTTCAAACCGAGGTGACATTCACTGACCTCATCCCAGCCACAG
AGTATGTGATATCTGCAACAAGCATCAACAAGCACAACGAGGGGACAGCA
GTAAACCTTACTGTGGGAACAAGTACGAACACGTTGAGTTTCAATATATG
ATTGGCCATTTGCAGTACATAAACTGAAATGTATATCATGCCCAAAGCAC
AGTAAATTAACAGCCCACTCTCTCTACAGCCTCTGGACTGTATAACTGTG
TTGAAATGAATTGTTATGTGCATGGTATCTATTGCTACGTGTGTATTGTT
AGTATTTAAAACCACTGGAATAATAGCTTGCAAAATGTTATGTTTTGAAT
AAAAAATAATCTAATGAATATAAGATAAAGGATATAAAATAATGTTATGA
ATATGAAATAATGACATGTTATGTTATTACAATAATGCATTTTTCTTATT
TAACTTAAGTGTACACTGTATCATTTATCCTCAGAAACGGACAGTCCGAT
GGCATTGGGTGTTGAACTGAAGACAACCAACACCATAACAATCTCATGGT
TAAAACCTAAAGCTGTCCTGATCGCTTACAACATAACCTACACCGAAGAT
GGAAGAAGTACTTCACTGATCAAGTCTGCGGGTATAGACAGCTGTGAATT
GACAGGTCTGGTTCCTGGTACTCAGTACGACATTGAGTTGGTGGCCGTTA
GCAGGTTGGGGAAGAGTATCGCCATCGGTAAAAGTGTTGTAACAGGTAAG
TAGAGGTTGGTCATGGGTGGGATGGGTTTTAATATGTCTAATTCACGTCA
CGACAAGGATATAAAATTACATTGTGCTTAAAGGAATGATTGTTGCACGA
AGCGTATCCAATTTATTCTTTTAATTTGTCTGCTTACACTACGCCGTAGA
TATCTAAGTGCCTTCCCTGGCAATGAAGTTATATTTGTCTATGTCTATCT
TATCTTTAGACACAGATCCACCGTCGAGTCTGAGAGTCACCAAGTCCTCC
GCGACATGGTTGTTCCTGGAATGGACGCCACCTGTGGCAAACATTCTGTC
TTACAACTTGGACATTTCAGACGAATACGGAGATACAAGGACATTGCGGT
AAGAGGGCATAAATGTGTACGACAATGAATTGCACGTGTGTAAAATTATT
GCATAGATTGTTATATAGAATGTAGCAACTCAAAAAGACATAACTTGGAA
ATATTTAACATGGATGAAAATGTTTTCATGACAGAGTTGATGGACACAGG
ACAGTGCACAACGTCACAGGACTCCTACCAGAAACAACATACGTCATCAA
GATGGCGGCCGACAGCGAGCATGGTCAAAGTGTGGACAGTACATTTTCAA
ACAAAACGGGTATAATATTTGTTTTTAACATCTGTATAATAGTAATTAGC
TCCTACGTCAAACTGTGAAACCACTTTTTTTCTAATGAATCATTCCCTTG
GACTTAAATTTATTTAGCACTTTGAAAATTGATAACATTGATAAATCGTA
AATTTTTGCATCACACATTTGATTGCTTTTGACAAATTTCATTGAGATAC
CTTATATCCAAAAAAGGTTCTCTGTCGTTTAACGGGGTGAGCACGACTGC
TTCCCCGTACACAACGAAGGGAACGTCCACAACAGATGAAAGAAGTACAA
CAGTATCTCCTACTCCGTTCTGGACAAAGTTCACGGCAGTCCAGGATATG
AAAGGTACACATATCACAAAATAACGGGAACCTTCAAATCAATTTCACAT
TGATTTTATTGTGCTAATGATTATCACAGGTATTAACTATGTTAGTAATA
CCTAGTAGCACGGTGATTACGGTAGTCACGTTTTGACAAACTTCTTGGGA
GGCTCCACGGGACAGGACAGACTGTTGATATACTTGACAGGAAATGTCTT
TCCTTTTATCGTTCTGATTATTTCTAAATATAATGCTTAATGAAAGTGAA
TTAGAATTTAAATAAACAACAGCACGTTGTTTTTTGTAAAAGAAAAAAAA
TAGAGACTTAATTTTCATACGTACAAAGCTGAAACGTGTAGAAAGTATTT
GATACGTTTGATACAGACCAAATCACAAGTATAAAGATGCGTTTTCATCA
TCTCATTATGTGTGCCATGAAAGTTATGCTGACTTCATCACTTTAACTGT
GTTGTAGCAACAACTTCAAAAACAAAAAAGGCGACGCATTTTGAAATGGG
GGCTGACGAAACAACAACAGGCCGACTGCTTGCTACAAACCCAAGTAAGA
GAAATCCACAATTATTTTTAATTTGATACGTATACAGGCATTGCATTGGG
CAGTAAAAGCCAAATAGATTGAGATGTTATGACATTTTTGTTGTAACAAT
AGATTAAGAATTCTGAAAATATCATGTTACATGCAATAGATTGTTTAAAA
TGTGCGTTTGTATAGACGTTTTAAATGTTGTGCCCATCTATGTAATGCGA
TATCTTTAGTAACATGTTATTGTCGTTCACAGTGACTTCTCCAACAAAAT
CAAGGCAAACTCCATCTATTCCACAGACATCGATGTCAGGTATTACCGCA
TTTTAGAAGGGAAGGATTCGTGTTTTTTGTCTACAATTATGGGTATTCTC
ATAACAGGCAATATGATGCCCCAAAACATGCAAAATATAGTATGTAATTT
ATTTATTTATTTATATACATAGTATGTAATAAAAATGTACTACCGGTTTT
GTATACTCGACGTTTGAAGTTGATGAGACAATATCTGATTCTGAGTTTCA
GACATGACACTCTATGCTGCTTCTGCAAAACCGACCACTGAAGATCCAGG
AGAAAAGGTATGACTGCATTTGAACATCTTCTTACATGTATGTATTCCCT
CTCTTATCATTTGCATGCGCCCAACATAAGTCCATTTTCCATACAAGAAT
ACCTCTGCATCATCATACGCGCCCACTGTATGACGTTTGTGTATATCAAG
CAACGACCCTGGCGTACCGGCCTGCAATCTGTCCTCGCTGCGTTAGCATT
GGCCAATCACCACCAACCAACCACGGTGCCGACTACGGTCAAGAGGCAAC
ATGATTGGCAGGTAACTTTCCTCCAACAACAGCTGACCAGCGCTAACACA
TCGAGAAGGACGAATCGCAGACTGATACGCCAGGGTCGGGGCTTGATTGT
TGTTGTTAACGCTGTTCGTTCGTCGTAGTCGACGATGACCGGGGACATCA
CATTAGGGACGGTATGTCCGACTGTGGCTAAACAGCCCAATGCGGGCTCT
GAAGGTTCTGCCACAGGTCGGGCACAGGTGGGTTGCTGAAGTAGTAGGGG
GGTGCGGGAGCAGCTCTGGACGAACGTTTTCTCTCAGCTTCAGTGGTTCT
GCTCTGCTCGTTAGAGGTAGCACCTCTGTTGATATGGCTTCGCCAGGAAG
AGCGGTCAAGCGCTTTAGCTTCCCAGGACTGTGTGACTATATTGAAGCCC
TTCAAGGCTTCATCATAATATACACGAGTATACTTAATATACCCTGTATG
ATTTGTATGAGCCATTAGACAATTCGTTCACTGATATTTTATTTCCTGGA
ACATTTCATAGCTCCAGGAGCTCTTACAAGACCTAGACCAAAGTTTGATG
GATGCTGTGGTACCAGGGGACATCCTTGCAGTGACGTCCAACATCAAACA
AATCATCAAGCCCAATGATGATTCAGCAATGCCCCTATCAGTGTTGGTAA
GCTGGACTCTAGTCTGCCTCTGACAATCAGCTGTTCATTAAGTGGAATTA
CCGGCTTACACAATGTGATACGTTAGTTTTTAATAAGTAGTCGTCAGATT
ACAGAGAAATGATAAACATTTACCTTGTGTGGTGTCTTCTCTGGACAGCA
AACTACTACAGAGATCATAGAGAAGCTTGCGTCTGTCGCTAGAGGATCAC
AAGGCGCATCAATAGATGATATGGAGGCCATAGCCGATGGTGAGAATCAT
TTACGCTGAAAATCTTTAAAATTCACAGAATTGATAATCCCCCTGTAAAG
CTCATCTAAAGTCTTGATTCAGTAATCCCGATCTAACTGATTGCCTGCAT
TCCTGTAGCAAAGATGAAACCAACGAAAGTGCCACTTTATTTGACTTTAC
ATTTCGGCACATATTCTTTATGTTACTTAAGTCTTCTCTACTATACTATA
CTATACTATACTATAGATTACCCTACGACACCCCATCCTACCCCCCTACT
CTACCCTACCCTACCCTACCCTACTCTACCTTACCCTACACGACCCTAAC
CTACCACACCCTACCGAACACTACCCTACCAAACCCTACCCTACCCTACC
AAACCCTATATCCTAGCCAACCCTACTCTACCCTACCCTTGAAATACTTG
TATAAGAGATGATAATGTACATGGATTCATTGCTGGTGGATAAGTTGGCT
AGCAGTCAGATGCCTTTTGTGTTGGTTTCAGCCTTGGTGCAGACGGCGTC
AATTGTTATTGACATGTTACCGGAGCAGGAAACACAGACTGCAGGTTACT
CAGACAACCTGTTTGAAAGTGACCTTATCGACACGAGTTCCACTGACCTT
TCCCCCAAGCAACAGCTTAAGATGTTTAGAGAAAAGCAGAATGAGAGAGA
AGACATGGTAATTATATATCATATTTGATAATAAGCATTGTTTCTGATGA
TATGACAAAGGAACACTATCTTAATCTATTGATTAAAGTCATTCCTGAAA
CTCACAATTAAAGTTTGGTGGTTTTCTATTTGAATTAGCAACGAAAAGTG
TCGCAGTCTATTGTGGCATCTTTGGACCAGGTTGCTGAAACCCTGCTGAC
GTTGCAACCCGAGGATGTAGAGTATCACTCAAGCTTTAAAACAGAAAGCG
TCGCCGTCAATATGGCAAGGTCTCCCTCTGACAAAGATCTCCTCCTCGAC
TCAGGGGATATTGTGGCAAATATCCCACCTACACCTGGACCTAAGACACG
TAACATGGTGGATGTCAGGGTAAGAAGGACTTCTTCAAGGTCACAATGAC
TTTTTTCCATTCTTCAAGTACATGTATGTTGTAAAATCGTTGAAAATAAA
GTAATATGAAAGATAGAGCGCTTACAGTTCAACAAATGATTAAGCCACTT
TGAATCTTGGGATAGGTGACGTAACATTGCTTCGATACTAAACAATATAT
TGTTGTATTGTGTGTTACAGATGTCAGTTTTCAAGAAGAACCCATATTCC
TGGAGTAAAGCGACAGGAGGACAAAACATCACGTCTTCAGTGGCGTTACT
GACCATTAATCCAAAGACCTCTGGAGACCTTAGCAAAGAACTAAAGGTAA
AGATGGATATGGCATTTGTACCATCCAAAGAGAGCAGACATTCAGCCGGC
CGGCCATCACATGTAACGACAGAAAGACCGAGTAGGGCAGAGGAAAACAC
CAACGGTACAACAATGGCGTACCACGCCTTCAATGTTCAATACGATAACG
TCATCCCTGTTATCCGTATGAACTGGTGGGATGTAGAAGCGACATTTCAC
GTCTACATCTCGTACGGATCTCCTCCGACTGAAGAAAAGTATGACGAAAA
AAGAGTTATCAAGAGAGACGGGTATGAGGACTGGCTCAGGGGGACAAATT
TTTCAGCATCCTTAATCCCCAACACGACTAAACATGGCGGACGTATGCTG
TATGTTGGAGTACAGAAGTTAGGTGCGTTTTCCCCACGAAACATACTTTA
TTATGTTGTCCGTTTATATACAGTTGTTAGTCAAACTTGTAGCAATGGTG
ACAATTTCGTATACACATATTATTCCCAGGATCAGTTAGCTCGGTCCATA
GTCATCAACAGCAGCCTACCGTGCAGGTCCTGGACAAGGATGACTACACA
CTGTCGATGTCAGCTGTAGGCTGTTCGTCTTGGAAAGACAGTAAGAAACA
ATGGAAGCTCGAAGGCTGTGATGTAAGTCAATCTAGTTATTACTGCGATG
CTATCATTCCCAACTACCTACCTACTTGCCCCTCGACCTAACCTTGTCGA
CGAGGATGGGAGGGGGTGGTACAAAGGCAAGGTAGACACTGAATTGGTCA
GTTGCTGCAAGAAGACAGAAAAAGATCAAGACTGCTCCGGCAAGCGGAGG
CATTCGTAACTGTTGCCTTTTGGGCCTGCTGGTTGATAGGAATTTGGCTT
GTATGTTTTAGTATATATTCTCACCAGTGTGTTATCTTAAATGTTGTAAA
TGCCCAAAACGTTTCATTGAACTTACTGAAAAAATGCATATGACATTAAA
AATGGTACACGTTCTGTCAAAAAGCTATACAATCATAAAGGAAGCAAAAG
ATGAAAGCCAACGATGAATCAACGTACTTCACTTGACATTGACACTAACG
CAGTACCAGACAAAGCAGTACCAAAGAAACACTACCATAAGATATGGACA
AAAACGCCCTAGGTTGAAATTATACTGTTTTTATACTGTCTACATTATGC
AATACAGATTTTACCGCATTTCTTTTCATCATGTAACCTTGACAGACTGA
CATTGATCTGGACCATGGGACCATCAGCTGCCAGTGTCACGTGACAGAGG
GGAAGGTCTCTGTGGGGACCATGACTCTTCCGCTTCCCAACTCCATCAAC
TTCATCAACGCGTTCAAGAACTTCCGCAATCTGAGCGAAAACTCCGTAGT
GTTCTCCATCGTGGTGTCCGATTCCATCTTGTACATCCTACTCATGGTTT
TCTTGTGCGCGGACTTTCACCGTATATGGGTAAGCCTAACGTTGGTTCAT
TCTAGAGTTTCAGCAATCTTCTAACGGTAGTTATGCTTTTTATTGCAAAC
GTCATCTTGCCAAGACCTCTGACAAGTACCAGGAATCCGACATGTATGCT
TGCAAATGCATCAGATAGCCGCGAGGAACAGGCAGTTCTGTATGATTAGT
GTTACGTTGCACTTCATTTAGTTGCATTTCTGTTGAATTTATCAATAAAA
TTAATTACTTACTTTAATAAAACCAAATTGATACAGCTGTTTATGCTTAG
GGCTGAGGATTATAGTTTTTCATACTTCCTTAGATGCTTCTTCGTCGCCG
TGTCTCCTCCCGGATAAGCCCGATTTCTGGAGAGAGTGGAGGAGAGAACA
ACCAAAGGAAGACTCTGGATAAAGTGAGTCTGATCCCTCCTGACAGGATG
CCTGCCCGTCACGTCTATCAAATCACAGTCACCACCGGGTCCATGTTCGG
GGCAGGGACCACGTCACGTATCGGCTTCCAGCTCTTCGGGTCAGAGGGCA
CGACCCCGGTCAAGATGCTGAACCCAAAAGGAGAGGTCGGTGTTGTAGCT
CAGTAA Coding sequence (CDS) from alignment at Sc0000142:35519..42874+ >Blg02163.0 ID=Blg02163.0|Name=Blg02163.0|organism=Branchiostoma lanceolatum|type=CDS|length=2373bp|location=Sequence derived from alignment at Sc0000142:35519..42874+ (Branchiostoma lanceolatum)
ATGTGGATAAGGCGCAGTGATACTGCTGAGAGTCTGTTCACACAGTTTTT
GTCGACAGTTCAAACCGAGGTGACATTCACTGACCTCATCCCAGCCACAG
AGTATGTGATATCTGCAACAAGCATCAACAAGCACAACGAGGGGACAGCA
GTAAACCTTACTGTGGGAACAAAAACGGACAGTCCGATGGCATTGGGTGT
TGAACTGAAGACAACCAACACCATAACAATCTCATGGTTAAAACCTAAAG
CTGTCCTGATCGCTTACAACATAACCTACACCGAAGATGGAAGAAGTACT
TCACTGATCAAGTCTGCGGGTATAGACAGCTGTGAATTGACAGGTCTGGT
TCCTGGTACTCAGTACGACATTGAGTTGGTGGCCGTTAGCAGGTTGGGGA
AGAGTATCGCCATCGGTAAAAGTGTTGTAACAGACACAGATCCACCGTCG
AGTCTGAGAGTCACCAAGTCCTCCGCGACATGGTTGTTCCTGGAATGGAC
GCCACCTGTGGCAAACATTCTGTCTTACAACTTGGACATTTCAGACGAAT
ACGGAGATACAAGGACATTGCGTGACTTCTCCAACAAAATCAAGGCAAAC
TCCATCTATTCCACAGACATCGATTCGACGATGACCGGGGACATCACATT
AGGGACGGTATGTCCGACTGTGGCTAAACAGCCCAATGCGGGCTCTGAAG
GTTCTGCCACAGGTCGGGCACAGCAAACTACTACAGAGATCATAGAGAAG
CTTGCGTCTGTCGCTAGAGGATCACAAGGCGCATCAATAGATGATATGGA
GGCCATAGCCGATGCCTTGGTGCAGACGGCGTCAATTGTTATTGACATGT
TACCGGAGCAGGAAACACAGACTGCAGGTTACTCAGACAACCTGTTTGAA
AGTGACCTTATCGACACGAGTTCCACTGACCTTTCCCCCAAGCAACAGCT
TAAGATGTTTAGAGAAAAGCAGAATGAGAGAGAAGACATGCAACGAAAAG
TGTCGCAGTCTATTGTGGCATCTTTGGACCAGGTTGCTGAAACCCTGCTG
ACGTTGCAACCCGAGGATGTAGAGTATCACTCAAGCTTTAAAACAGAAAG
CGTCGCCGTCAATATGGCAAGGTCTCCCTCTGACAAAGATCTCCTCCTCG
ACTCAGGGGATATTGTGGCAAATATCCCACCTACACCTGGACCTAAGACA
CGTAACATGGTGGATGTCAGGATGTCAGTTTTCAAGAAGAACCCATATTC
CTGGAGTAAAGCGACAGGAGGACAAAACATCACGTCTTCAGTGGCGTTAC
TGACCATTAATCCAAAGACCTCTGGAGACCTTAGCAAAGAACTAAAGGTA
AAGATGGATATGGCATTTGTACCATCCAAAGAGAGCAGACATTCAGCCGG
CCGGCCATCACATGTAACGACAGAAAGACCGAGTAGGGCAGAGGAAAACA
CCAACGGTACAACAATGGCGTACCACGCCTTCAATGTTCAATACGATAAC
GTCATCCCTGTTATCCGTATGAACTGGTGGGATGTAGAAGCGACATTTCA
CGTCTACATCTCGTACGGATCTCCTCCGACTGAAGAAAAGTATGACGAAA
AAAGAGTTATCAAGAGAGACGGGTATGAGGACTGGCTCAGGGGGACAAAT
TTTTCAGCATCCTTAATCCCCAACACGACTAAACATGGCGGACGTATGCT
GTATGTTGGAGTACAGAAGTTAGGATCAGTTAGCTCGGTCCATAGTCATC
AACAGCAGCCTACCGTGCAGGTCCTGGACAAGGATGACTACACACTGTCG
ATGTCAGCTGTAGGCTGTTCGTCTTGGAAAGACAGTAAGAAACAATGGAA
GCTCGAAGGCTGTGATACTGACATTGATCTGGACCATGGGACCATCAGCT
GCCAGTGTCACGTGACAGAGGGGAAGGTCTCTGTGGGGACCATGACTCTT
CCGCTTCCCAACTCCATCAACTTCATCAACGCGTTCAAGAACTTCCGCAA
TCTGAGCGAAAACTCCGTAGTGTTCTCCATCGTGGTGTCCGATTCCATCT
TGTACATCCTACTCATGGTTTTCTTGTGCGCGGACTTTCACCGTATATGG
ATGCTTCTTCGTCGCCGTGTCTCCTCCCGGATAAGCCCGATTTCTGGAGA
GAGTGGAGGAGAGAACAACCAAAGGAAGACTCTGGATAAAGTGAGTCTGA
TCCCTCCTGACAGGATGCCTGCCCGTCACGTCTATCAAATCACAGTCACC
ACCGGGTCCATGTTCGGGGCAGGGACCACGTCACGTATCGGCTTCCAGCT
CTTCGGGTCAGAGGGCACGACCCCGGTCAAGATGCTGAACCCAAAAGGAG
AGGTCGGTGTTGTAGCTCAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02163.0-exon-Sc0000142-1570713199:35519..35690 | Blg02163.0-exon-Sc0000142-1570713199:35519..35690 | Branchiostoma lanceolatum | exon |
| Blg02163.0-exon-Sc0000142-1570713199:36053..36313 | Blg02163.0-exon-Sc0000142-1570713199:36053..36313 | Branchiostoma lanceolatum | exon |
| Blg02163.0-exon-Sc0000142-1570713199:36528..36666 | Blg02163.0-exon-Sc0000142-1570713199:36528..36666 | Branchiostoma lanceolatum | exon |
| Blg02163.0-exon-Sc0000142-1570713199:38051..38102 | Blg02163.0-exon-Sc0000142-1570713199:38051..38102 | Branchiostoma lanceolatum | exon |
| Blg02163.0-exon-Sc0000142-1570713199:38747..38845 | Blg02163.0-exon-Sc0000142-1570713199:38747..38845 | Branchiostoma lanceolatum | exon |
| Blg02163.0-exon-Sc0000142-1570713199:39417..39507 | Blg02163.0-exon-Sc0000142-1570713199:39417..39507 | Branchiostoma lanceolatum | exon |
| Blg02163.0-exon-Sc0000142-1570713199:40000..40175 | Blg02163.0-exon-Sc0000142-1570713199:40000..40175 | Branchiostoma lanceolatum | exon |
| Blg02163.0-exon-Sc0000142-1570713199:40307..40537 | Blg02163.0-exon-Sc0000142-1570713199:40307..40537 | Branchiostoma lanceolatum | exon |
| Blg02163.0-exon-Sc0000142-1570713199:40739..41240 | Blg02163.0-exon-Sc0000142-1570713199:40739..41240 | Branchiostoma lanceolatum | exon |
| Blg02163.0-exon-Sc0000142-1570713199:41348..41490 | Blg02163.0-exon-Sc0000142-1570713199:41348..41490 | Branchiostoma lanceolatum | exon |
| Blg02163.0-exon-Sc0000142-1570713199:42064..42297 | Blg02163.0-exon-Sc0000142-1570713199:42064..42297 | Branchiostoma lanceolatum | exon |
| Blg02163.0-exon-Sc0000142-1570713199:42602..42874 | Blg02163.0-exon-Sc0000142-1570713199:42602..42874 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000142 | genome | Sc0000142:35519..42874 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02163 |
|
