Blg02173.0 (mRNA) - B. lanceolatum

Overview
NameBlg02173.0
Unique NameBlg02173.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000142:532678..534033-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02173.0 ID=Blg02173.0|Name=Blg02173.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1356bp|location=Sequence derived from alignment at Sc0000142:532678..534033- (Branchiostoma lanceolatum)
ATGATAAATAGTGGCCAAAGTAAAAAAAAAAATGACATTTTNCCGCATAT
TTTGTGTGAAACGTTAAGAGCAGCTATCTGTAAAAACCAAGCAGAATGAT
AAATAGTGGCCAAAGTAAAAAAAAAAATGAAATTTTCTTAAATTTAGTGT
GATGGTAGGGCCTTGGACCAAACGTACAAAAATGGGAAAGTTTTGGGTCG
GAGGTTACCAGTTGCCATGGCAACGGTCATTTTTCAAAATGGTGAACTTT
CGCCTTGTAAAAGCCTCTCTCTCACTCAAAATGGACCATCTTTGGCCTAA
TGTACCTCTTTTGGTTTTTCTATTCAGTGTTAACCCCCTGGTTTTGTATA
TGAGCGCGAATACAAGTATTCGCGAAGACTTATTGTTATAAACCATCAAA
GAGTCACACCTATTTGTCTCCAGTTAGTTTATCGCAAACTTGCACTTTGT
GGGGAGAGAGGGCAAAAAACGTGGGTGGCAGATAGCTTATGATGTAACCA
AAGAGGTAATACAGAAGTTGTGTAGGTTCGGGCCTTCTCTGGAACTGCAG
GGGCGTTATTGTGAAAATCGTCTAAGGAGAATAACTGAACAAAGAAATGA
CGGATTTCCATAATATTTTTTCGATAGAGCTGGTTTAACGAATCTGCGTT
CTCTTTCCCAGGTACATGGCTTTCACAGGATTCATTATGGGTTGTGGACT
CCGCCGGCACACCGTGGGTCGACCACGGAGTGACTTATAACGCCGCAAAA
GCCTTGGATGGGGACACTTGGACCTTTTGGAACCCTCAAGATACTGAGTT
CAGGCACAACAACTGGTACATCACACTGGACCTCACAGCGCCCCACACTC
TGACCCACATCGCAGTCAACAACTACGGAGACACGACTCATGACATTGCA
GCCTTCACGTTGCAGAAGTCGCAGGTTGGGAGTCCATACAACTGGGAGGA
CGTCGTGTCCGTTACTAACGTGCAGGGAGGGACGGACCAGCGCCAGGTGT
TCGGCGTGTTCCAGGGAACAGCGCGATATTGGAAGTTCGTGATCACGCGG
ACCCACTCGGGCTATCAGCCATACCTTACAGAGCTGAACCTCGGAACCTC
ACCAGGTAAGGGGAAATGTCTTGTTTTGTTTTGTTTTGTAACCTATTCAA
AATATCGACACTAGGGAGGTTCACAGCAAATAGTCACGTGATATGGTGAT
GTGAAGCACTAGGATTAAATGCCAGACATTCTATATCACACCTATTACAA
GGGGACCTTTTAACTACCTTACAATTTTCGTGTCAAAATACCGAACTCGA
AAACTCTATTCAAACGTTTTACCAACCTCCTTGGTTTTACTCTAGCAACG
TGTTAG

Coding sequence (CDS) from alignment at Sc0000142:532678..534033-

>Blg02173.0 ID=Blg02173.0|Name=Blg02173.0|organism=Branchiostoma lanceolatum|type=CDS|length=474bp|location=Sequence derived from alignment at Sc0000142:532678..534033- (Branchiostoma lanceolatum)
ATGATAAATAGTGGCCAAAGTACATGGCTTTCACAGGATTCATTATGGGT
TGTGGACTCCGCCGGCACACCGTGGGTCGACCACGGAGTGACTTATAACG
CCGCAAAAGCCTTGGATGGGGACACTTGGACCTTTTGGAACCCTCAAGAT
ACTGAGTTCAGGCACAACAACTGGTACATCACACTGGACCTCACAGCGCC
CCACACTCTGACCCACATCGCAGTCAACAACTACGGAGACACGACTCATG
ACATTGCAGCCTTCACGTTGCAGAAGTCGCAGGTTGGGAGTCCATACAAC
TGGGAGGACGTCGTGTCCGTTACTAACGTGCAGGGAGGGACGGACCAGCG
CCAGGTGTTCGGCGTGTTCCAGGGAACAGCGCGATATTGGAAGTTCGTGA
TCACGCGGACCCACTCGGGCTATCAGCCATACCTTACAGAGCTGAACCTC
GGAACCTCACCAGCAACGTGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02173.0Blg02173.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02173.0-exon-Sc0000142-1570713199:534015..534033Blg02173.0-exon-Sc0000142-1570713199:534015..534033Branchiostoma lanceolatumexon
Blg02173.0-exon-Sc0000142-1570713199:532929..533372Blg02173.0-exon-Sc0000142-1570713199:532929..533372Branchiostoma lanceolatumexon
Blg02173.0-exon-Sc0000142-1570713199:532678..532688Blg02173.0-exon-Sc0000142-1570713199:532678..532688Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000142genomeSc0000142:532678..534033 -
Properties
Property NameValue
GeneIDBlg02173