Blg02266.1 (mRNA) - B. lanceolatum

Overview
NameBlg02266.1
Unique NameBlg02266.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000493:83102..87892+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02266.1 ID=Blg02266.1|Name=Blg02266.1|organism=Branchiostoma lanceolatum|type=mRNA|length=4791bp|location=Sequence derived from alignment at Sc0000493:83102..87892+ (Branchiostoma lanceolatum)
TATCACCATCAATGGTACCATGGTGTTGTCGCTCCTATGAAGGAACCCCT TCCTCGATTAACTCCAGTCTTTTCTGAGTCTCACAGTTCTATGTATACAA ATATATTTTTCAGGGTTTATGCCGATTGGAGTTAGCGGTGTCCTCGACGT GTCGGCGCCGGTAAAACGTCAGAAAGGCCGTCGGACAGGGTTGGTTCTCC TGGCGGGGGTATGTGTCGGTGCGATGGCGGTGTGCGCAGTCCTCATGCCG CTCGTTTACTTCACTCTGGCCGATCTGCAGACAAAAGTGGACAAACTCAG CAACGACCAAGTCCAGCAGGTAGGGATGTCTATTGTCTGGTCAGCTGCAC TCACATGCGTATGACATACACACATACCTGTTCTTATTGTGTTTTAATGT TTGCTGCACGGACTCGAACAAGCAGTCTAAGTAGCTAATTTCCGTTCTTA CTTTTGATTTCTTGAAATATTTACATTAACAACAATACAAAAAATGTGTA AAATTGAGCAATCTTCATACAGATGTTTTGAAAAAGGCATATGGTGTGCA GTACAGTTTTAGTTCCTCAACTTATTTCCGTAACCTGATACGGCTGGGAG AAGTGTAAACATGTGACGCGGCACATGATGATGTTGTTTAAGACCAGGCC GATAAGACACCTGTGTCATGCATGGTCACGTTTGGTATGAGCCCCATGCA TGCCATGTTACACTTCAGCTGACAGACCTTTAAGCCCCCCTAGCTCTCAC TGGACCCGCGGCACGCTGGCGGCGTCGCTGCGGCCGATCTGATTGACAAA GCACTCAACGTCATCGACAAAAAAAACCCGAATCTTTTTAATTAAGCTTT GTGTGTTTTGTTGTCTTTTTGGTCATACTTGTACGTTTCGAATGATATTC CCATTATAAAGTCAAGAGTAACACAAATCCAGTTTAGGAGAAAGCGACGC CGCCAGCGTGCCGCGGATCCAATGAGAGGGGGGCTTTAGGGACATATCAC ACTTGTGCGTATATTCAAATACGTATGACTTGCGCATTAACATTATGTTG GTTTAAGTCAAGTTTGCGGGGAAGAAGTTGTTTTCTACTTTGACAAACCT TTGTGCAGCCTAGTTATTGAACCAAATAAATGACTTCCACGGCTGCAAAC TTAACCACTTAACCTAAACCAAAAAAATGTTAATGCGCCACTCTTGCGGA CATGTATATACGCACAAGTGTGAAAGTGGCTTTAGATGATGAAAGACTTG CTTATTTATCCCTGTTATCTAGTACTGAAAAGTGTAGTAGCATTAAAGCC GGGATAAACAAAATAGTCGGGATAGTGGTATTGTGATGGTTTTATCCCAT ATTTTCGCCAGTAATACATTTGATAAAACCATCACAATACCACTAGCCCG ACTATTTTGTTTCTCCCGGCCGGTTTTAATGCTACTACACTTTTCAGTAC TAAATAACAGGGATAAATAAGCAATTAGTCTAAAGGTCTTGACCCCGAGT ATGCGTTACCGGTACATGTACATGTACTTACAGAGACGCTTATTTGCCCT AGGCGTTAAAGTTACACGGCGATTCAGCGGTGGTTGCTACCGACTCGCTT GGGGAGGCTGTAGGCGTTCAGACCGCCTACGGTAATGGAGACCGACCTCG CCGTGACGCCGGAGCTGGAGTTCGCCCCCCTCCTCCACCACCCCGGACCG GAGCAGTGTACGTGCGCTGGGGAAGGGAAGGCTGTGCCTCGGACATCGGG ACTCTGTACAAAGGTAAATACATCGTTAAAGCCTTTTACGTGGCGGTGTA CGATTACGAATAAAGCCTGAGTACCATCCTGGTTAGTTTTCTGCTCACGT CCACTGTACGTGATCAGCAAGGTACAAGTGGGCGAGCGTAAAACTAACTA TAGGACGGTGCGCACGGTACTAAATATACCTGCGTATGTCAATCACATCC CCATTACAATAGGGCGGCGACCTTGCTGCGACCGTGCTCCGACCAAACGA TTTGTCAGAGCGCGCAGCAGATTTCATAGATAAAAGATGACTTTTTAAAA ACACTTTGTGTTCTTCTTCTTCAGTCATACTTTAACATTTGGCATAATAT CCCATTTATGAAATGAAGCGTTAAACAAATCCAATTCAGGTCGCAGCAAG TTCGCGGCGCGATCGCCATGCAGTGGATAAGGGGCCTTACCTTAAACGTT GACTGTTGCTGAAAATAATTATTTGTCTTTAGGGCCCTGTCACACTTGTG CGTATATTCAGGTGCGCGGTGGTTGCGCATTGACAGTTCTTTGGTTCAAG TACGGCTTGCGGGGGAAAAGTTGTTTACTACTTTGACCCACCGTTCTGCA GCCAAGTGATCGAACCTTAGGGCCCTGTCACACTTGTGCGTATATTCAAG TGCGCATGACTTCCGTAGTAACATCTTTTTGGTTTAAGTAAATTTTGCGG GGAGGAAATTGTTTTCTACTTTGACACACCGTTGAGCAGACTAGTTATCG AACCAAAGAAATGACTTCTTCGGCTGCAAACTTAACCTAAACCAAAAACA TGTTCATACGCAACTCATGCGGACTTGTATATGCACACAAGTGTGACAGG GGCTTAACCTAAAACGTTGCTGAAAATAATCATCTGTCTATAGACAAATC GTAAACTGTTAGAAAACATGGATTATGAGACTAGCAACAGTACAGACGAA AGGGTTTAACAAAACAAAACAAAACAGATAACTGCCGAGAAGTTGTAATA AGTTTTTAGGAATTCTCGGCCGTAACCTCATTTGTTTATATAGAACTCAA GAATGTTGTGGCTATGTTCCGTGAGTCTCAAGTAAATATCATTTCCTTCA CGGACGAAAAGTGTCAGCTGGACACTTTTAATGTTTGGAAATATAATGCG GTAATCAAGCGGTAAAGATTCAATTACAATTCTATTATACATTTCCTTGA CCTGGATGACTGATATTCACAAACGCGTGAAACTATAAGATACTGTATAT AACAGGTCCCCTTATTTGTCACGTTGACGTTGTTCCCTTGGAAAAGGCAC TTTACATGACTTTCACTCAGGTGAAAATGAGTACATAGCTTTGAGTACAT AACTTCGGTTAGGGACGTCCCTCGGATATGACGTTAAATGGAGGTCCCGA GTTTCAGGAAAGCCACACCTCGAGCGCGTAAAAGAACCCACCACGCTTAT CGAAGATGTAAATTTATATGCAGCTTGTACTGTTCAATACAAACCTAGTG TGTTACGCCATGAGGCGGTTTACAGGGTATGCAATACAAACAAACATAAC TTCAACTTGATTGTCTTCCTTTTGAACAGGAGTTGTGGGAGGTGGGCATT ATTCTCATCACGGAGGAGGTGGGAACTACCAATGCCTCCCTTTGGAAGAC GTGGAGTGGGACAAACCACAGGCAGGGTACCAACACGGCAGCTACATGTA CGGGGCAGAGTACCAGAGCGGGAACGCGCAGTTTTCCACCGACAACATGC CAGACGGCATCAGCAATCCAGTGAACTACGACATTCCCTGCGCCGTGTGT CATGTGGTCGGACGGTTCGCACACGTCATGATCCCCGCCCGCCTGTCCTG TCCCCAGGGGTGGAGCAAAGAGTACAGCGGCTACCTGATGTCGTCTCACC ACAGTCACCAGAGCAACAAGGACTTCATCTGCGTGGACGGAGCTCCCAAT CTTGTGCAGGGGTCGGCTACTGATCAAAACGGGGCGCTGCTCTACCTGGT AGAGGCGCAGTGTGGCTCTCTTCCCAATGGGCCTTACGTCAATGGATACG AGCTGACCTGTGTGGTCTGCACCAAGTAAACAGAGTTTACAGTATGCTTT GCGAGTTCACAGTGTCGGACAATTATCCCTGCAAGAACGTTGTGCTGTCG GGATATATGGTCGTGTCGGTTTTGTTTGTTTGTGCATTTTGTTTTGTATA CAACAGCAGATGTCGGGAATGGGTCTTGATAATATTTGGTATGATTTTAT GTGTACATGCAGTAGTCAGGGGCTTCATAGAGGCTTTTTAAGGTTAATTC TGCATAGAAACGTTTGGTTTTTGTATCTACTAACATGTTCAGGCAGAATA TGCTATGTGGTCATGATGTTTGGGCCACAAATAGAATCTTTTTGGTTTAA AAAAGACACGATGCAGGTTTGGACCTGCTAGCAGCATTATTTTAGACAAG AAGTGGCATTTTTGCTAGATTATTTGAAAATAGATAACTCACAATGGAAG TAAGTAATGGATTTCCCAACGCTCATTATTTTGAAGCTTAGGCGAAGATG GCAACTTCTTGAATATAGGTAAATATGACTACACAAACAGTTGGCAAAAG AGAGTTTCATTTGCGTACGAAATGATATGATATGATAACCTTTTTTTAAG AACATACTACTCAGATTTTTGATTTGAAGGAAATCATTATTGATTATTAA TCATGAAACTTCAATCATATTCAAGTAGTAAATAATAGAAATTTTATATT TGTGATGAATAGAAGATAGGTTGAGTTAAACATCACAATAAAGAATAATT AGAGGCTCATTTTTAAGCTTAATGTTGTGCTCGTTGATGACGGAAATGTA AGATCGCGGAGCTTTACTTTTTGTAATTTTTTTATATCCAAGGAATGTTA TCACATTATAATTCTATTATAAACGAATAAACGGCTTGCAAAACACAAAA CTGTTCAACATGATAAGGATAGGGCTAATAATGAACTTTTGCAGCAATGG TATCTTTTATCATACTGCACATATAAGGTAATTGCAATACA

Coding sequence (CDS) from alignment at Sc0000493:83102..87892+

>Blg02266.1 ID=Blg02266.1|Name=Blg02266.1|organism=Branchiostoma lanceolatum|type=CDS|length=912bp|location=Sequence derived from alignment at Sc0000493:83102..87892+ (Branchiostoma lanceolatum)
ATGCCGATTGGAGTTAGCGGTGTCCTCGACGTGTCGGCGCCGGTAAAACG
TCAGAAAGGCCGTCGGACAGGGTTGGTTCTCCTGGCGGGGGTATGTGTCG
GTGCGATGGCGGTGTGCGCAGTCCTCATGCCGCTCGTTTACTTCACTCTG
GCCGATCTGCAGACAAAAGTGGACAAACTCAGCAACGACCAAGTCCAGCA
GGCGTTAAAGTTACACGGCGATTCAGCGGTGGTTGCTACCGACTCGCTTG
GGGAGGCTGTAGGCGTTCAGACCGCCTACGGTAATGGAGACCGACCTCGC
CGTGACGCCGGAGCTGGAGTTCGCCCCCCTCCTCCACCACCCCGGACCGG
AGCAGTGTACGTGCGCTGGGGAAGGGAAGGCTGTGCCTCGGACATCGGGA
CTCTGTACAAAGGAGTTGTGGGAGGTGGGCATTATTCTCATCACGGAGGA
GGTGGGAACTACCAATGCCTCCCTTTGGAAGACGTGGAGTGGGACAAACC
ACAGGCAGGGTACCAACACGGCAGCTACATGTACGGGGCAGAGTACCAGA
GCGGGAACGCGCAGTTTTCCACCGACAACATGCCAGACGGCATCAGCAAT
CCAGTGAACTACGACATTCCCTGCGCCGTGTGTCATGTGGTCGGACGGTT
CGCACACGTCATGATCCCCGCCCGCCTGTCCTGTCCCCAGGGGTGGAGCA
AAGAGTACAGCGGCTACCTGATGTCGTCTCACCACAGTCACCAGAGCAAC
AAGGACTTCATCTGCGTGGACGGAGCTCCCAATCTTGTGCAGGGGTCGGC
TACTGATCAAAACGGGGCGCTGCTCTACCTGGTAGAGGCGCAGTGTGGCT
CTCTTCCCAATGGGCCTTACGTCAATGGATACGAGCTGACCTGTGTGGTC
TGCACCAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02266.1Blg02266.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02266.1-exon-Sc0000493-1570713199:83102..83420Blg02266.1-exon-Sc0000493-1570713199:83102..83420Branchiostoma lanceolatumexon
Blg02266.1-exon-Sc0000493-1570713199:84654..84864Blg02266.1-exon-Sc0000493-1570713199:84654..84864Branchiostoma lanceolatumexon
Blg02266.1-exon-Sc0000493-1570713199:86431..87892Blg02266.1-exon-Sc0000493-1570713199:86431..87892Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000493genomeSc0000493:83102..87892 +
Properties
Property NameValue
GeneIDBlg02266