|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000100:605143..612427- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02368.1 ID=Blg02368.1|Name=Blg02368.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7285bp|location=Sequence derived from alignment at Sc0000100:605143..612427- (Branchiostoma lanceolatum)
CGAAAAAAGGTTCTCTCTTTGTCGTCCTTGTGCCAGTCTGGCGCGACGGT
AAACATGACGAACAGGTGAGGGTCAACGCTGGCAAGTCAGCAAACTCCCG
TTAACTCTATACAGCGTAGACAGGTAACCAAACCCATTGCACTCGCCCAT
GCTTTTTGCAGTGGGTTACAGTGGAGAACGCTCTGTACATACCGCCTAGG
TCTGAATAATAACCATATCATTGGCTTTTATGAGATGTATGTGAGTCAAT
AAGCCATATTTTCTGTTAAAGAAGGATTTTCTTCATTATTTGTGACATAT
AAAATGATTTCTTACACAGAAATAGAGTAAAGGTTTGTCATTCATACCTT
TGAATAACTTACGTGCTGTCAGGCATGGAGCGGATACAGTCTAAATACGT
GTTGCCGGGAAACGGACCATCGGCACGTAAGCTAGGATTCAACCAACATA
ATCGTCTCTTGTGCCAAAAAACATGAACAGCTTTGTTTTGGAATGAGAGT
GAAAAAATCACCCTGTGTGTGATGCAAAACTGACGGTCAAATGCTAAGTA
TTTTTAAACAAATTACGAGGACGTTTTATGATTGATGATGGAAAGATTAG
ATGGTTCTGTGCTTGGAACGGCTTTGTCCCGTACGAATTGATTTTGCTTA
GGCTGGTTGTGCATTCGACCTTCATTGTCTAGTCATTACAAACACAAAAG
CAGCGGAAATACATTTCACCGTTTGAGTAAATAGTGACGTCATATGGTCT
GGCGCCATATATGGACAACCCAAATCCCAGGATGGTAACCTGAGATTTTC
CTTCCTTTGAGTTTGACGTAACTTGTTGTGGTTTCGCACGATGAGGCGTA
GGGCACTTGGGCAATCCAACTATAAGACGTTGGAATACAAAGAATGGTAT
ATAGATAAAACTTACAGCTATAGACATGTTTCTATCAGTTTTATGATGCA
TGCAGCTATTGGACAAAGATAGAGAAGACACGTGATATTTAAGATAACAG
AAGGGGGATACCTTGACGTTTTACTGCAGCGTTCTAAGCTGTCCCATGAC
TAGCACATGTGGTATTGCGTCATTACCCATTGGTGAACCGCTGTATACTT
CACCTGCAGCCATTGTCAGTGTTTTTCTTTCACAATCGCACCTTTTAGCC
GATGTGTATACTAGTATGCTAATGTACTAGTATCTTGTTTCTAAATACAC
AATGAAAGTGTTTTGTAGTATTGAATTCGAAAGTTACCGCTTAATGCAAT
ATAGTATGAGTCGACGGTATATGGCCGCAGCCTCGTTTGCCTTATGCATT
ATAGCAGTCGCCGGATGTCACTATGAAACAAAGTTGGGACATTTTTAGCC
TCCGTTGCAGTCCCTGCCACTAGCGATTTTTTAGCGATTTGTTTCCAATA
TTTTTTTTTGTGGGGGGAGGGCGTATTTGCTTAAGGCCCCGTATCTGCTT
GGGATCCTGTTACCGCTGTGATTCTGTGTCACAGGATCACAGCGGTAACA
GAATCCCAAGTAAAAAATTGAAGAAAAAAATCGCTAAAAAATCGCTAGTG
GGAAGGACTGCAACGGAGGCTAGGACATTTTATTGTAATTCAGAGCTACT
GTGTTGATATATAGAAGTCGCTTAAACTATAACATTTAAGACGGAAAGGA
AGCATGTGCGGTTTCGGGTGCCTATAGTTATCATTAGATATTGACCACAC
CTGTATTTCTCCCCTATGTTCAGCCCAACAGGTGTGTTATGACGGGCTGG
GTTGTTTCTCGCGGGGCGGGGACTTCCCTGACGCCCTGCCCGAGTCTCCC
AGCGAGATCAACACTCAGTTCCTGCTGTACACCCGCGACAACCCCGCCGC
CGAGCAGCAGATCATGTATGACGACGCCAGCAGCGTCCACAACTCGTACT
TCGACAGGTAGGAAATAGTACAGTGGGAGGGAGAAGAGGCGTTTATTGTT
GGAGGATAGAGGTGGGGAGGTTTTAGTCAGGCCAAGATTTTTAAAATCGG
TAGAGAAAAAATATGACTGTCTGTCCATTACTTTAAGTGTTATCTTTTGG
TTATGCCAACATTTTTTAAATCTGTAGAGAAAAAAATGACTATCCGTATA
TAACTTGAAACGTTATGTTTTTTCCAAACTAATAACATTTAACTGACAAA
AAGGAATAACATAACCTCATTGACAGTTGACGATGTCGTATAATCTAGTC
TCTAACTTTTTGAACTGTGCGAGTCTGAAAGGCACTTTTCTGTTCACTGT
AGCTCGAAGAAGATGAAAATCCTTGTCCATGGGTACATGGACGACAAGAC
TGAGGAGTGGCTGATCCTGGCACGGGAGGCCATCTTAGCTCGGGAGGACG
TTAACGTCATCGTGGTGGACTGGGGCGGCGGCGCCAACAGTCTCAACTAC
ATCCAGGTGGCGGCTAACACACGCGTGGTGGGGGCGCAGATCGCTCGATT
CATCAACTATCTTATGGTAAGGACTGAGGGATACAGACATGATATTTAAG
CACTAGTACTGAACTATTGTTTTTCCGTATCGGTTCATATGCCATTCAGA
TCTACGCATGTCCATGATTCCACGCCAAAAAAATCATGAGTTTCATTCTT
GGCATACTGGCCGATGTGAATTGTGCGACTGATGCAAGATGTCATCTGCA
CACGGCGTCCACCCCCCCCCCCTCTTTCTTGAGGCTTCGGATCATAATGC
CAGTCTCGAACCACCAAACATTAGCCTGAGTGTCATCCTGTTTCAGTTCC
AGGCTCTACCTTTACAGGATGACACTCGGGCTAAACAAACATGCCATGAG
CCGTTTTTCACGTCTACTCTATTTTGCGACTTTTCCTCATAGCAACTGAC
GTTCCTGTCGGAGTCGTCAGTACATCTGATCGGGCACAGTCTGGGGGCGC
ACATCAGCGGGTACGCCGGGGAGAGACTGCAGCCCAGACCCGCCAGGATC
ACAGGTAACGTTGGGTAACCTAAATTCGGGATTTTTCCGATAATGGTTGA
CTGAAATCAATCTAGCAGAACAACAAACCATCCTTTTTTTCTATTATTCT
GTCAGTATCATGTACTATCTTTGCACTAATCATATATATGGTAGATTTTG
TCTCTAGTCGTGCTGACACCATAATATTTCAACTTGAAACTACCGTCCGC
CGCACGCACAATGACAGTGTTGTCGGACAGGGGGGCACATTAATTCGGGA
GAGAAGATTCGTCTTGAATATCTTACCGCTAATCACATTTTATACAGCAG
CTATTCGTTCCATCCTTGGCTTGAGAAGAGTGCTATGGATATAGACGTGT
CCAAGTAAAAAAAATGCACGAAAAAACGGCCGCACCGCACACATCAGGCC
TTTGCTAACATCCCGTTTGTTGAGTCGGTTGAACGTCACTCAAAGTCGAT
CCCCACCGTCATGGCAACGTGTACATTATTCATGGCAAGTTAGCTGGATG
CCGTAGCAATGGTTATACTACTATGTCCATGTGTTCCTTGTTGTGTTAGG
AGCAAACTTTGAGGAAAATATCGTCTTCAGTCCACTATCACACGCAACAT
TTAGACAAAAAAGTGTTCCTCACAAACCTTTTGTCGTCTGCTTGACGACA
TGATTCTGGGTAACAATATGGCGGCGGGAAAATACACGTGCCGTAGGTTG
TAGCAACAAAGAGGAGTTTTGATGATTGATCACACTTAGAATCCAGTTGC
AGGTTAGCAAAAGAGATTGTAATAAGTTGTCTTGTAAATAATTGTGTTTA
GCAGGCAGGAGATGTGACATTTGTCTTATAAACCAGCGAACAACCGTGCA
GTGTGAGTCTCCCACGAAGCCCCCAGACTCTGTCAATAAGGGACGGAGAG
TTTTTGACGTAGCCAACTTCTAATGCATGGTTATCGAAGCTTTTCAGGCA
GTGTTCTGAATGTGTTAGTCTGTCAAGTTTGCATTTCTAGTGGTATTACT
GATGTTGCATCTAGCACATATCCCTAAATACGCCGTTTTCGAAAAATCCC
GAATTTAAGTACCCCACGAATTTATGTTACCCAACGTTACAACACATACA
TTCACACCTGCTCATTCTACCGCGGCAAAGATTTAAATGTGCTATATCAG
TATATGCATGGATGTCATTGTGGCCCAACTGGTAGTAGCCTCACAGAGCT
CCTGTTTCTAATCAGTTGGTAATTTGGAGACCCAGGTTCATGATCAAGTC
CCGGGGTCAGGATATCTTTGCTGGGGCTGCACCGTGTTTAGGAAGGGACG
TAAAATGGGCGTCCCGTGTTCGAGGACGGCTGCCTCGAGCACGTTTAAGG
GGAAGGGCTAGTAACCCCTCCCTGTAAGAATATACCCTGCTACTGAGACA
GCAAGGAAACCTGCTGCCCTGTGTGCCACCATGCACTACAATGGTGAAGA
AAAACACGTCATCACTTCGCATCTTGAGATGTTTCATCCCTGTGCTTTTC
TCACACATTAGCCCTTGACGCCGCAGAGCCAGGCTTTCAGGGCATGCCGA
CGCATGTGCGCCTGGACCCGTCGGACGCCATGTTTGTGGACGCCATTCAC
ACCGACGGAGAGAGTATTCTCTCATTGGGTATGTATTTCAATAATCTCTT
CTACTGTGCACTCAAAATTAAATTTTCCTATCACAATGCACTATGTGTTA
TAATCACATGAGCCCTGGCCCCAATCTTTTGTTTTCAACCACAGAGACGC
GCTTTAGATTCTTGCTCAGGTAACATTTAAAGCGGGCGTATGGTCTGATT
CTCAAATTGTAGTATCACGATGCGGCATCCAATTTGTGTAAAGTATTCTA
TTCCCAATCCCTCCATCCAGGATTCGGAATGTCCCAGCCCGTCGGCCATC
TTGACTTCTACCCTAACGGAGGCTCAGAACAGCCGGGGTGTGAGGAAAGC
ATCCTGGACTTCATCGTGTCGGAGGGATTGATAGACGGTGAGCTGGTTTT
CCCTTGTTGCATTGTCTCTCTCTTAATGATTTTTCTTCCTTCCTTCCTTC
TTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCATTTTTCCTTTCATCCT
TCCTTCGATTTATCCATCCTCCTTCTTTCCATCCATCCATCCATCCTTCC
TTCATTCCTTCCTTCCTTACGTCCATTTTCCCTCCCTCCCCCCTTTATTC
TTTATAGTCTTCGGTCATATTTTATCATCGGGCTAAGGTATCCTTTATTT
AGACTCACAATTCATGTTCTCCCTTTCCAGGCAGCAAGTATTTCGTCACC
TGTAACCACAAGAGGGCTTCCAGGCTGTTCATCGAGTCCATCAGCACGAG
CTGCCCGTGGCGCGGCTACCCGTGCTCGGACTGGGAGGCGTTCCAGGCCG
GCCAGTGCCTGACGTGCGGTGCGGTGGGGTGCTACAGGATGGGGTACGAG
GCCGACAAGAACACCCTGTCTGCAGGGGCGGAAAACGTCAAGCTGTATTT
TACGACGGAGGGAGAGTCTCCGTACTGCCGTAAGTTCACAAAGATGTCCG
AGTGCTTAAGTCCTAGGGTACTTAGTAGCTACGTAGCCTCAAACAGAAGA
AACTATAGATTGGCTATTAGATATGGCGAAAACATTGTCAGCGGAGATAG
CCATAGAAAGTTCATTTAACTCCCAACCATACTTTAAAATTCAGCCAGCA
ACTGCATGTTTGTGATTCTTGCAAGTGTGTCGTGAAGGGTGAAGTTTGAC
GACTGGAAATGAAATGGAACCTGCTTGTCCTGCAGGCCGCGAGGAACACC
GGGTGAGCCTGACCATGTCGGCGGGAGCAGACTTCAGGGAGGTCCAGGAG
ATGTACGTCACTCTGCACGGGACTGGCGGGTCTTCCTCACAGGTCATGGT
CGTCGAGTAAGTCTTCTGCAAAATTTTCTTCTGTGCTAAGATACCAGGCT
CGTAAAAGATGCCACTGTGCAAGCCTGCTCAACACACTGAAGATAGGCAT
CTAACACAAAGGACTATGTCGTTTTAAGAAGGAAAAACACAGCTCTCTAA
ATGCTAAAAGGTCCTTGCAAGATGCAGGGCACAGTGGAACAACTGCAGGA
CATTTCCACGGCTGTATATATATGAAAAAAAAATAGTAGATGATGTTACA
ACGCGCACATCTTATCAAAATATCAAATAATGTGGCCATTCTTTGCTCCA
TTTCTAACAGTATTAATGTTACATTTCTGTCCATCAGGGACGACAAAGAC
TTTGAGCATGGTCAGCCGCACGTACGAATAGTGTAGACGACTGAAGAACT
GGATAACGTACTAGTGTTGAACTTTCTGTGGGCTGTCTCTAACAGTCTTA
TTAAATCTTTCCTTTTACCATCAGAGATGACAAAGACTTTGAGCCCGGCC
AGACGTACGTGTTTATGGTGGGGACGGCTGATGACCTGGGTACGGTGACG
AGTGTGGACGTTCAGTGGGAGGAGGATGACGACTGGTACAACCCCTTCAC
ATGGTTCAACTCCCCCACCCTGGTGCTGGACAGGCTCACAGTGGACACCG
CCGGGCCTAACACATTCAGCACGTTAGTATTGTTACATCCATGAAAAATA
GAGGTATTGTTTTTTGGCGTATATGTGTGCTTGTGTGTGTNTGTGTGTGT
GTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTCACGGTACGGTGTGTTTCCCGATAGTTGTG
GTCAGTATAACTAAACTAAAGAACCTCTGGATGGATTATGATGACATTTG
GTACGTGGGTAGGTATTGCGAAGATAAGGGTTAAGGTAGATTTTAGACCA
CGTGGTATGTGACCTTGGCACTGCAGCAAAGCGTACTTTTTCGTATCCTT
TATCCTGGTTTCGAATCGTACTCTTCTATCATTTACATCTAAATTGTATA
GACATGTCTTTATACTAGTGTAGTATTAAGAAATGGTGAGCTGAGTATCT
TAGACTATTATGATTCATAATCAATTAATTTGTTTTTATTCATTTCGTAT
ATAGGGCGACGTTCTGTACCAGTCCCAGCGGTTTGGCGGAGGGTGACACC
ATTTCCGTTACTGTCGGGGGGTGCGGTGGCCCCATCACTGGATAGACAAG
TACAAGTACTCCCCTCAAGCGTGGGTTCCGAATGAATCGGCCACGAGCAC
ACATGTACTTTGTCTCCAATACTCATGAAAATCTACGTAAAGCGTAATGT
GATAAAGTCAGGAACATCATTTAAGGTACAGATTATATTTGTAGAAAAAC
ATTGTGATGAAATTAAAGTGCAATACTTTCAAAAT Coding sequence (CDS) from alignment at Sc0000100:605143..612427- >Blg02368.1 ID=Blg02368.1|Name=Blg02368.1|organism=Branchiostoma lanceolatum|type=CDS|length=1263bp|location=Sequence derived from alignment at Sc0000100:605143..612427- (Branchiostoma lanceolatum)
ATGTATGACGACGCCAGCAGCGTCCACAACTCGTACTTCGACAGCTCGAA
GAAGATGAAAATCCTTGTCCATGGGTACATGGACGACAAGACTGAGGAGT
GGCTGATCCTGGCACGGGAGGCCATCTTAGCTCGGGAGGACGTTAACGTC
ATCGTGGTGGACTGGGGCGGCGGCGCCAACAGTCTCAACTACATCCAGGT
GGCGGCTAACACACGCGTGGTGGGGGCGCAGATCGCTCGATTCATCAACT
ATCTTATGCAACTGACGTTCCTGTCGGAGTCGTCAGTACATCTGATCGGG
CACAGTCTGGGGGCGCACATCAGCGGGTACGCCGGGGAGAGACTGCAGCC
CAGACCCGCCAGGATCACAGCCCTTGACGCCGCAGAGCCAGGCTTTCAGG
GCATGCCGACGCATGTGCGCCTGGACCCGTCGGACGCCATGTTTGTGGAC
GCCATTCACACCGACGGAGAGAGTATTCTCTCATTGGGATTCGGAATGTC
CCAGCCCGTCGGCCATCTTGACTTCTACCCTAACGGAGGCTCAGAACAGC
CGGGGTGTGAGGAAAGCATCCTGGACTTCATCGTGTCGGAGGGATTGATA
GACGGCAGCAAGTATTTCGTCACCTGTAACCACAAGAGGGCTTCCAGGCT
GTTCATCGAGTCCATCAGCACGAGCTGCCCGTGGCGCGGCTACCCGTGCT
CGGACTGGGAGGCGTTCCAGGCCGGCCAGTGCCTGACGTGCGGTGCGGTG
GGGTGCTACAGGATGGGGTACGAGGCCGACAAGAACACCCTGTCTGCAGG
GGCGGAAAACGTCAAGCTGTATTTTACGACGGAGGGAGAGTCTCCGTACT
GCCGCCGCGAGGAACACCGGGTGAGCCTGACCATGTCGGCGGGAGCAGAC
TTCAGGGAGGTCCAGGAGATGTACGTCACTCTGCACGGGACTGGCGGGTC
TTCCTCACAGGTCATGGTCGTCGAAGATGACAAAGACTTTGAGCCCGGCC
AGACGTACGTGTTTATGGTGGGGACGGCTGATGACCTGGGTACGGTGACG
AGTGTGGACGTTCAGTGGGAGGAGGATGACGACTGGTACAACCCCTTCAC
ATGGTTCAACTCCCCCACCCTGGTGCTGGACAGGCTCACAGTGGACACCG
CCGGGCCTAACACATTCAGCACGGCGACGTTCTGTACCAGTCCCAGCGGT
TTGGCGGAGGGTGACACCATTTCCGTTACTGTCGGGGGGTGCGGTGGCCC
CATCACTGGATAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02368.1-exon-Sc0000100-1570713199:612363..612427 | Blg02368.1-exon-Sc0000100-1570713199:612363..612427 | Branchiostoma lanceolatum | exon |
| Blg02368.1-exon-Sc0000100-1570713199:610521..610704 | Blg02368.1-exon-Sc0000100-1570713199:610521..610704 | Branchiostoma lanceolatum | exon |
| Blg02368.1-exon-Sc0000100-1570713199:609962..610175 | Blg02368.1-exon-Sc0000100-1570713199:609962..610175 | Branchiostoma lanceolatum | exon |
| Blg02368.1-exon-Sc0000100-1570713199:609474..609585 | Blg02368.1-exon-Sc0000100-1570713199:609474..609585 | Branchiostoma lanceolatum | exon |
| Blg02368.1-exon-Sc0000100-1570713199:607850..607966 | Blg02368.1-exon-Sc0000100-1570713199:607850..607966 | Branchiostoma lanceolatum | exon |
| Blg02368.1-exon-Sc0000100-1570713199:607491..607607 | Blg02368.1-exon-Sc0000100-1570713199:607491..607607 | Branchiostoma lanceolatum | exon |
| Blg02368.1-exon-Sc0000100-1570713199:606949..607197 | Blg02368.1-exon-Sc0000100-1570713199:606949..607197 | Branchiostoma lanceolatum | exon |
| Blg02368.1-exon-Sc0000100-1570713199:606572..606692 | Blg02368.1-exon-Sc0000100-1570713199:606572..606692 | Branchiostoma lanceolatum | exon |
| Blg02368.1-exon-Sc0000100-1570713199:605906..606103 | Blg02368.1-exon-Sc0000100-1570713199:605906..606103 | Branchiostoma lanceolatum | exon |
| Blg02368.1-exon-Sc0000100-1570713199:605143..605423 | Blg02368.1-exon-Sc0000100-1570713199:605143..605423 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000100 | genome | Sc0000100:605143..612427 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02368 |
|
