Blg02381.2 (mRNA) - B. lanceolatum

Overview
NameBlg02381.2
Unique NameBlg02381.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000100:72031..75681-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02381.2 ID=Blg02381.2|Name=Blg02381.2|organism=Branchiostoma lanceolatum|type=mRNA|length=3651bp|location=Sequence derived from alignment at Sc0000100:72031..75681- (Branchiostoma lanceolatum)
ATTTGCTTGACATCTATGAAATTACAGGGAATATTTGCAGTTTTGACGAC CACATACAAGCAAGAATCATATTCCCTTTTTCTCTAAATCTTATGTGTCA TTATTGTATTGTTTAGATCTACAATCAGGAAGAGGGTTTAAATTGAATTC AATTTGACATAAATAATTTGTTGAACAGTAAATATAAATTTTTACATTTC ATTGTGCCTGCCAATGTATCTGTATGAAGCATAACTAGCACACCTTATTG GCTTTTGCAACAAAACCCAGGTCCAGCTCAGTGGCAGCAGAAGAGAAAGA GGGCACTTGAGGAGTGTGGAAAGAGTCCGGCTCCTGAGGAAATCATGATG GAAAAACAACCACGATATTCAGGTACTAAAACATTAATGTTGTAAAGCTA CTGAGTACTTCATTATCAAGGGTAACATTTCCATACATGTAGATCTTGCA AATCAGTCGTGACCTGTAGCAATGATTATTATAAATCGGCACCTATAAGT CATGATGAAGCAAGATATTTTTTCTGTCACAGAGCCAGAACCTGACATGT CAGTGATCACTCACATGAGGAACAGCTCCACAGGTCATGCAACAGACATA TCCAAAGACTGTACTGCACAGGGCCATGCTGACACAGGTAAAACTATGGA AGTTTGGCTTATCTTCAATAAACTTTTATTTTGTGATACGAAGGAACACA ATGCAGAAATTGTTTGGGTCAAATGGAAGTCAGTATTGGCAACAAACATG ATTCAGGATCATGAGATCGATGCTTTACTTCAGTCTGATGTTTGTAGATC AGAGCCTGTCCAACAAAATCACTATTCATGTGCAACATTGATGAAATGTC CATACAACAAAATACCTAGTTAAGTGCATGTGGGTTAGATATACCTTGTG TATGTGACATCCAAGAGTCTTACCTGTTTTCTTATCATTTTGTTCCTTTA GACAACATATGGGACAGGTTCAGAAGTATGGCTATTGAGATGCCGCCAGG AGATGAAGGAAGCAGACTTGCAGCCCACCTGATGGAGTCAGGCCTCACAC TCCGACCTGACGTGCTCAAAGATGGAAACTGCCTCTTCCATGCTGTATCC GATCAACTTGTGCGCACTGGAAGTCAGCCAATCAGCCACTCACAGCTCAG ACGAGAGGTGGTTGGCTATCTTAGGCAACATCCTCACAATGTAAGTCTGT ATCTGGATATTGAACGGGAAGTAATTAGAGTCAGATGAGAATAGCTACAA TGTACACATAGATCCTCCCATTTTCCAAATACAAAACATTCTTCAAAAGA AAAATGAAAAGCATGACAAAGCCATTAATATTATTCAGTGCCTTCATCCT CTTAAAAGCAGGTTTTTAATCTATTTTGGAATATCAAAGTCTATCTCTCT ATGTATATTATATATCATAATTTCAGTAACTTCAGATACAGCTATGAATC TATACAGCTCTGACTTTGAACATTCTCTTGCCTGACTGAAGCTTCATGGT CTGATCGACACATGCATGTATCGTCTTCACAATTTTGGTGCACAATGTGT GATACTGAATAAAACTTGCAGGCTTAAACTTTGACTCATTGTCAAACATG GCAAAAACAGTAACTGTTGTTTAGTTCCTATCTTACCTGGATACTTCTTA CCTTGACTTTATCATGCTGTTTCTCTTTCAGGAGCAGGGTGATCACCTTC GTGCCTTTGTGCCCAGTGAAGACTGGGAAGGCTATCTACAGCAGATGTCT CAAGATGGAGTGTGGGGAGATCACATCGTTCTACAGGCCCTGGCTTCCAT GTTAGACAGAGACATCAGGATTGTGTCCAGCATTGATGCAGACAACTACA CAACCATTCTGTCACCTATGGGGAACCAACAAGATACCACAGGACCACCA CTACTGCTTGGTCACTATGCTGAAAACCACTATGCTAGTCTGGATAGTCT GGATGGTAGGTATAATTTTCTAAAAGACTGTTAACATTGTTCAAACAAAA CAAGGAGGACAGATGATAGTAAGAATAAAATGACTTAATGATTATTGGAC AGGTGTCTTAGGTAAAACCTGATCATGACTGTCAGTTAATTTTAAATGTT TTATCATCCATACAGTCTGCCCAAGATCAGCCATCCTGCTAATCATTGAT GAGTATGGCACTTCTAAAGGTGGGATTTCCACCATCAACCACCAGCTGGC ACAACTATTGAGACGTTTTGGAGCAGTCGTGTACTGCACAGTACTGTGGG TAACAACAGAGGACCAGGAACAAGCAGACAAAGATGGTGTCCATCTCATC AGACCTTCTGTGCAAGCCCGTGACACAAGGAAACCATCCTTAGACTGGCT CACATATGACCACCATATCCGATACCCAAACCTTCCCGAGGATGTGGGCT ACATTGTTGGTCATGCTGACATCACAGACAATGCAGCAAAGAATATAAAA ACCAGTCGCTATCCACAAGCAAAGCTCTTCACATTCAACCATACAATACC TGAAGATACAGAACACTACAAGGGAGGTCAGAAACCAATGAAAGCATGGA AAAAAGAAAAGGACTTACTACAGGTAGCTGATGCGGCAGACATAGTTTTC TCTGTGGGCAGAAGAATCTACAATCACTTTGAGACCATGTATAAAGGAGA CAAGAAGCCCAAGAGACACCACTTTTTCCTTCCAAAGCCTTCCAAGACAT TTGAAAACACTCATGTCAAGCCAGGTGGAGAACAGAAGGCTATCTTGTCT ATCGGGAGAGTTAGCAAGGTAGAACAACTAAAAGGTCATGACTTGGCTGC GCGTGCAATGGGCAAAGTTGCAGAGGTGATCAACAATGTTCGATGGCGTG CACGTGGCATCAGTGAAGACGACTTTGAGACAAGTAAGAAGATTCTAGAA GACAACTTACAAAGTGGTAGACTTAAACCAACTCTTCTTCCCTACGGGAC ACAGAAGGAGATCAGTGATGACATGAAGACGGCTCATCTAGTTCTGATGC CATCTCGTTCTGAGCCATTCGGACTTGTCGGACTTGAGGCCCTGGCAGCT GGTATCCCTGTCCTCATCTCAAGTCAATCAGGACTTGCAGATCTAATTAA AGAGCTGATCAAGGAAGGAAAATGCAGCCCAGATCTCAGACATAGGATTG TGGAGACAAGTGTGAACGTCAGTGACCTGGCTACAGATGCAAGCAAGTGG GCAGAGAAAATTGTGGACACTTTAAAGTGGAATGATGAAGAATTCCAGAA AGCTGCGCTTTTTAAACAGCAACTACAAGAGTCCNGCAGCGCTTTTCAAA CAACAACTCCAGGAGTCCATGTATTGGGAGGAATCACACCAAATTTTTCT CCAGGCCTGTGGCATCACAAATGCATTTGATTCTTAATGTTAGGGGGATG GGAGCAGGCATGGGAGCCAAAGAACAGGAGCTATATTCTATTGTCTTTAT GAATCAATCTTCTCCCACTGCCAAGGTAGCCTTTTGTCACAAAATTTTCT ACTTGGTAGTTTACAGGTTCCAACTGAAATTGATGTTAATCTTTGTTTTG CAGGTTCTTACACATAGTACAATTTTTAGCTTTAAAATTTAGTACAATAC ACTTTTCTGCTTGTTAACCTACATTTGTGTAGGGTAGAAAAGTCTGTGTA G

Coding sequence (CDS) from alignment at Sc0000100:72031..75681-

>Blg02381.2 ID=Blg02381.2|Name=Blg02381.2|organism=Branchiostoma lanceolatum|type=CDS|length=1737bp|location=Sequence derived from alignment at Sc0000100:72031..75681- (Branchiostoma lanceolatum)
ATGATGGAAAAACAACCACGATATTCAGAGCCAGAACCTGACATGTCAGT
GATCACTCACATGAGGAACAGCTCCACAGGTCATGCAACAGACATATCCA
AAGACTGTACTGCACAGGGCCATGCTGACACAGACAACATATGGGACAGG
TTCAGAAGTATGGCTATTGAGATGCCGCCAGGAGATGAAGGAAGCAGACT
TGCAGCCCACCTGATGGAGTCAGGCCTCACACTCCGACCTGACGTGCTCA
AAGATGGAAACTGCCTCTTCCATGCTGTATCCGATCAACTTGTGCGCACT
GGAAGTCAGCCAATCAGCCACTCACAGCTCAGACGAGAGGTGGTTGGCTA
TCTTAGGCAACATCCTCACAATGAGCAGGGTGATCACCTTCGTGCCTTTG
TGCCCAGTGAAGACTGGGAAGGCTATCTACAGCAGATGTCTCAAGATGGA
GTGTGGGGAGATCACATCGTTCTACAGGCCCTGGCTTCCATGTTAGACAG
AGACATCAGGATTGTGTCCAGCATTGATGCAGACAACTACACAACCATTC
TGTCACCTATGGGGAACCAACAAGATACCACAGGACCACCACTACTGCTT
GGTCACTATGCTGAAAACCACTATGCTAGTCTGGATATCTGCCCAAGATC
AGCCATCCTGCTAATCATTGATGAGTATGGCACTTCTAAAGGTGGGATTT
CCACCATCAACCACCAGCTGGCACAACTATTGAGACGTTTTGGAGCAGTC
GTGTACTGCACAGTACTGTGGGTAACAACAGAGGACCAGGAACAAGCAGA
CAAAGATGGTGTCCATCTCATCAGACCTTCTGTGCAAGCCCGTGACACAA
GGAAACCATCCTTAGACTGGCTCACATATGACCACCATATCCGATACCCA
AACCTTCCCGAGGATGTGGGCTACATTGTTGGTCATGCTGACATCACAGA
CAATGCAGCAAAGAATATAAAAACCAGTCGCTATCCACAAGCAAAGCTCT
TCACATTCAACCATACAATACCTGAAGATACAGAACACTACAAGGGAGGT
CAGAAACCAATGAAAGCATGGAAAAAAGAAAAGGACTTACTACAGGTAGC
TGATGCGGCAGACATAGTTTTCTCTGTGGGCAGAAGAATCTACAATCACT
TTGAGACCATGTATAAAGGAGACAAGAAGCCCAAGAGACACCACTTTTTC
CTTCCAAAGCCTTCCAAGACATTTGAAAACACTCATGTCAAGCCAGGTGG
AGAACAGAAGGCTATCTTGTCTATCGGGAGAGTTAGCAAGGTAGAACAAC
TAAAAGGTCATGACTTGGCTGCGCGTGCAATGGGCAAAGTTGCAGAGGTG
ATCAACAATGTTCGATGGCGTGCACGTGGCATCAGTGAAGACGACTTTGA
GACAAGTAAGAAGATTCTAGAAGACAACTTACAAAGTGGTAGACTTAAAC
CAACTCTTCTTCCCTACGGGACACAGAAGGAGATCAGTGATGACATGAAG
ACGGCTCATCTAGTTCTGATGCCATCTCGTTCTGAGCCATTCGGACTTGT
CGGACTTGAGGCCCTGGCAGCTGGTATCCCTGTCCTCATCTCAAGTCAAT
CAGGACTTGCAGATCTAATTAAAGAGCTGATCAAGGAAGGAAAATGCAGC
CCAGATCTCAGACATAGGATTGTGGAGACAAGTGTGAACGTCAGTGACCT
GGCTACAGATGCAAGCAAGGTAGAAAAGTCTGTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02381.2Blg02381.2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02381.2-exon-Sc0000100-1570713199:75310..75681Blg02381.2-exon-Sc0000100-1570713199:75310..75681Branchiostoma lanceolatumexon
Blg02381.2-exon-Sc0000100-1570713199:75045..75149Blg02381.2-exon-Sc0000100-1570713199:75045..75149Branchiostoma lanceolatumexon
Blg02381.2-exon-Sc0000100-1570713199:74492..74730Blg02381.2-exon-Sc0000100-1570713199:74492..74730Branchiostoma lanceolatumexon
Blg02381.2-exon-Sc0000100-1570713199:73736..74000Blg02381.2-exon-Sc0000100-1570713199:73736..74000Branchiostoma lanceolatumexon
Blg02381.2-exon-Sc0000100-1570713199:72486..73566Blg02381.2-exon-Sc0000100-1570713199:72486..73566Branchiostoma lanceolatumexon
Blg02381.2-exon-Sc0000100-1570713199:72031..72049Blg02381.2-exon-Sc0000100-1570713199:72031..72049Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000100genomeSc0000100:72031..75681 -
Properties
Property NameValue
GeneIDBlg02381