Blg02381.3 (mRNA) - B. lanceolatum

Overview
NameBlg02381.3
Unique NameBlg02381.3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000100:72031..74885-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02381.3 ID=Blg02381.3|Name=Blg02381.3|organism=Branchiostoma lanceolatum|type=mRNA|length=2855bp|location=Sequence derived from alignment at Sc0000100:72031..74885- (Branchiostoma lanceolatum)
GATCAGAGCCTGTCCAACAAAATCACTATTCATGTGCAACATTGATGAAA TGTCCATACAACAAAATACCTAGTTAAGTGCATGTGGGTTAGATATACCT TGTGTATGTGACATCCAAGAGTCTTACCTGTTTTCTTATCATTTTGTTCC TTTAGACAACATATGGGACAGGTTCAGAAGTATGGCTATTGAGATGCCGC CAGGAGATGAAGGAAGCAGACTTGCAGCCCACCTGATGGAGTCAGGCCTC ACACTCCGACCTGACGTGCTCAAAGATGGAAACTGCCTCTTCCATGCTGT ATCCGATCAACTTGTGCGCACTGGAAGTCAGCCAATCAGCCACTCACAGC TCAGACGAGAGGTGGTTGGCTATCTTAGGCAACATCCTCACAATGTAAGT CTGTATCTGGATATTGAACGGGAAGTAATTAGAGTCAGATGAGAATAGCT ACAATGTACACATAGATCCTCCCATTTTCCAAATACAAAACATTCTTCAA AAGAAAAATGAAAAGCATGACAAAGCCATTAATATTATTCAGTGCCTTCA TCCTCTTAAAAGCAGGTTTTTAATCTATTTTGGAATATCAAAGTCTATCT CTCTATGTATATTATATATCATAATTTCAGTAACTTCAGATACAGCTATG AATCTATACAGCTCTGACTTTGAACATTCTCTTGCCTGACTGAAGCTTCA TGGTCTGATCGACACATGCATGTATCGTCTTCACAATTTTGGTGCACAAT GTGTGATACTGAATAAAACTTGCAGGCTTAAACTTTGACTCATTGTCAAA CATGGCAAAAACAGTAACTGTTGTTTAGTTCCTATCTTACCTGGATACTT CTTACCTTGACTTTATCATGCTGTTTCTCTTTCAGGAGCAGGGTGATCAC CTTCGTGCCTTTGTGCCCAGTGAAGACTGGGAAGGCTATCTACAGCAGAT GTCTCAAGATGGAGTGTGGGGAGATCACATCGTTCTACAGGCCCTGGCTT CCATGTTAGACAGAGACATCAGGATTGTGTCCAGCATTGATGCAGACAAC TACACAACCATTCTGTCACCTATGGGGAACCAACAAGATACCACAGGACC ACCACTACTGCTTGGTCACTATGCTGAAAACCACTATGCTAGTCTGGATA GTCTGGATGGTAGGTATAATTTTCTAAAAGACTGTTAACATTGTTCAAAC AAAACAAGGAGGACAGATGATAGTAAGAATAAAATGACTTAATGATTATT GGACAGGTGTCTTAGGTAAAACCTGATCATGACTGTCAGTTAATTTTAAA TGTTTTATCATCCATACAGTCTGCCCAAGATCAGCCATCCTGCTAATCAT TGATGAGTATGGCACTTCTAAAGGTGGGATTTCCACCATCAACCACCAGC TGGCACAACTATTGAGACGTTTTGGAGCAGTCGTGTACTGCACAGTACTG TGGGTAACAACAGAGGACCAGGAACAAGCAGACAAAGATGGTGTCCATCT CATCAGACCTTCTGTGCAAGCCCGTGACACAAGGAAACCATCCTTAGACT GGCTCACATATGACCACCATATCCGATACCCAAACCTTCCCGAGGATGTG GGCTACATTGTTGGTCATGCTGACATCACAGACAATGCAGCAAAGAATAT AAAAACCAGTCGCTATCCACAAGCAAAGCTCTTCACATTCAACCATACAA TACCTGAAGATACAGAACACTACAAGGGAGGTCAGAAACCAATGAAAGCA TGGAAAAAAGAAAAGGACTTACTACAGGTAGCTGATGCGGCAGACATAGT TTTCTCTGTGGGCAGAAGAATCTACAATCACTTTGAGACCATGTATAAAG GAGACAAGAAGCCCAAGAGACACCACTTTTTCCTTCCAAAGCCTTCCAAG ACATTTGAAAACACTCATGTCAAGCCAGGTGGAGAACAGAAGGCTATCTT GTCTATCGGGAGAGTTAGCAAGGTAGAACAACTAAAAGGTCATGACTTGG CTGCGCGTGCAATGGGCAAAGTTGCAGAGGTGATCAACAATGTTCGATGG CGTGCACGTGGCATCAGTGAAGACGACTTTGAGACAAGTAAGAAGATTCT AGAAGACAACTTACAAAGTGGTAGACTTAAACCAACTCTTCTTCCCTACG GGACACAGAAGGAGATCAGTGATGACATGAAGACGGCTCATCTAGTTCTG ATGCCATCTCGTTCTGAGCCATTCGGACTTGTCGGACTTGAGGCCCTGGC AGCTGGTATCCCTGTCCTCATCTCAAGTCAATCAGGACTTGCAGATCTAA TTAAAGAGCTGATCAAGGAAGGAAAATGCAGCCCAGATCTCAGACATAGG ATTGTGGAGACAAGTGTGAACGTCAGTGACCTGGCTACAGATGCAAGCAA GTGGGCAGAGAAAATTGTGGACACTTTAAAGTGGAATGATGAAGAATTCC AGAAAGCTGCGCTTTTTAAACAGCAACTACAAGAGTCCNGCAGCGCTTTT CAAACAACAACTCCAGGAGTCCATGTATTGGGAGGAATCACACCAAATTT TTCTCCAGGCCTGTGGCATCACAAATGCATTTGATTCTTAATGTTAGGGG GATGGGAGCAGGCATGGGAGCCAAAGAACAGGAGCTATATTCTATTGTCT TTATGAATCAATCTTCTCCCACTGCCAAGGTAGCCTTTTGTCACAAAATT TTCTACTTGGTAGTTTACAGGTTCCAACTGAAATTGATGTTAATCTTTGT TTTGCAGGTTCTTACACATAGTACAATTTTTAGCTTTAAAATTTAGTACA ATACACTTTTCTGCTTGTTAACCTACATTTGTGTAGGGTAGAAAAGTCTG TGTAG

Coding sequence (CDS) from alignment at Sc0000100:72031..74885-

>Blg02381.3 ID=Blg02381.3|Name=Blg02381.3|organism=Branchiostoma lanceolatum|type=CDS|length=1383bp|location=Sequence derived from alignment at Sc0000100:72031..74885- (Branchiostoma lanceolatum)
ATGCTGTTTCTCTTTCAGGAGCAGGGTGATCACCTTCGTGCCTTTGTGCC
CAGTGAAGACTGGGAAGGCTATCTACAGCAGATGTCTCAAGATGGAGTGT
GGGGAGATCACATCGTTCTACAGGCCCTGGCTTCCATGTTAGACAGAGAC
ATCAGGATTGTGTCCAGCATTGATGCAGACAACTACACAACCATTCTGTC
ACCTATGGGGAACCAACAAGATACCACAGGACCACCACTACTGCTTGGTC
ACTATGCTGAAAACCACTATGCTAGTCTGGATATCTGCCCAAGATCAGCC
ATCCTGCTAATCATTGATGAGTATGGCACTTCTAAAGGTGGGATTTCCAC
CATCAACCACCAGCTGGCACAACTATTGAGACGTTTTGGAGCAGTCGTGT
ACTGCACAGTACTGTGGGTAACAACAGAGGACCAGGAACAAGCAGACAAA
GATGGTGTCCATCTCATCAGACCTTCTGTGCAAGCCCGTGACACAAGGAA
ACCATCCTTAGACTGGCTCACATATGACCACCATATCCGATACCCAAACC
TTCCCGAGGATGTGGGCTACATTGTTGGTCATGCTGACATCACAGACAAT
GCAGCAAAGAATATAAAAACCAGTCGCTATCCACAAGCAAAGCTCTTCAC
ATTCAACCATACAATACCTGAAGATACAGAACACTACAAGGGAGGTCAGA
AACCAATGAAAGCATGGAAAAAAGAAAAGGACTTACTACAGGTAGCTGAT
GCGGCAGACATAGTTTTCTCTGTGGGCAGAAGAATCTACAATCACTTTGA
GACCATGTATAAAGGAGACAAGAAGCCCAAGAGACACCACTTTTTCCTTC
CAAAGCCTTCCAAGACATTTGAAAACACTCATGTCAAGCCAGGTGGAGAA
CAGAAGGCTATCTTGTCTATCGGGAGAGTTAGCAAGGTAGAACAACTAAA
AGGTCATGACTTGGCTGCGCGTGCAATGGGCAAAGTTGCAGAGGTGATCA
ACAATGTTCGATGGCGTGCACGTGGCATCAGTGAAGACGACTTTGAGACA
AGTAAGAAGATTCTAGAAGACAACTTACAAAGTGGTAGACTTAAACCAAC
TCTTCTTCCCTACGGGACACAGAAGGAGATCAGTGATGACATGAAGACGG
CTCATCTAGTTCTGATGCCATCTCGTTCTGAGCCATTCGGACTTGTCGGA
CTTGAGGCCCTGGCAGCTGGTATCCCTGTCCTCATCTCAAGTCAATCAGG
ACTTGCAGATCTAATTAAAGAGCTGATCAAGGAAGGAAAATGCAGCCCAG
ATCTCAGACATAGGATTGTGGAGACAAGTGTGAACGTCAGTGACCTGGCT
ACAGATGCAAGCAAGGTAGAAAAGTCTGTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02381.3Blg02381.3-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02381.3-exon-Sc0000100-1570713199:74482..74885Blg02381.3-exon-Sc0000100-1570713199:74482..74885Branchiostoma lanceolatumexon
Blg02381.3-exon-Sc0000100-1570713199:73736..74030Blg02381.3-exon-Sc0000100-1570713199:73736..74030Branchiostoma lanceolatumexon
Blg02381.3-exon-Sc0000100-1570713199:72486..73566Blg02381.3-exon-Sc0000100-1570713199:72486..73566Branchiostoma lanceolatumexon
Blg02381.3-exon-Sc0000100-1570713199:72031..72049Blg02381.3-exon-Sc0000100-1570713199:72031..72049Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000100genomeSc0000100:72031..74885 -
Properties
Property NameValue
GeneIDBlg02381