Blg02453.1 (mRNA) - B. lanceolatum

Overview
NameBlg02453.1
Unique NameBlg02453.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0003402:53..1577+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02453.1 ID=Blg02453.1|Name=Blg02453.1|organism=Branchiostoma lanceolatum|type=mRNA|length=1525bp|location=Sequence derived from alignment at xfSc0003402:53..1577+ (Branchiostoma lanceolatum)
ATTTCATGCATCTATCTTACAACTAAGCAGGTCACTTGCAAAGGAAATTA
ACAAACACCTCACCCACAATGTACACACTATTAGTTTCATACAGGAAATA
CAAGCTGTGCAGGAGAGATTACTGCGAAAGCAGAGAAAACAGAACCACCA
GGAAAGTTTCAAGATTAATACAGTGACGAATATACCGTACATGTGTCTAA
CATGTCCGTCCCTTTTCCCCAGGTGAGTATAGGGAAGCAGGCGTCTCCTA
TCTGCTGCACGTGTGTGAAGGAGGAGATTGTGCCCATCGAGACCGTCATG
CCCGTGGACGCCTCGATCCGCCTCAAGTCCCTCCTCATGGACGCGCTGGA
ACAGATCCATTACGACGAGCCCTTTCTGCTGCTCACCGACATCAGGTAAA
ATGTTTGTTTGTTTGTGTCTTTATTTACACTCGAAATAGCTCTATTCGGC
CATCAGTGCCTCAAGTCCCTCCTCATGGATGCACTGGAACAGATACATTA
CAAAAAGCCCTTTCTGCTGCTCACCAACATCCACAAACTGCAGCATTTGT
ATATGAAATTTTCCTGGAAACTCATTCAGGATTCAAAAGGTTCCTTTTCT
TTTGATTTAGACCTTGAAGTTTTCAGGTATCCAGATGCTTGACTGTACAG
TTTGCAGCCAAGCAGCACTGAACTGAGCCTGAACTGAACTTCTCTTTTCA
GCAATGTTTTTGCCTACTCTGTAGTAAGCTTCAACTTGATTCTGATGCCT
CTTCGTTTCAATTTACAGCTGTGTCTCGCCGTGGTCGATCACCATCAGCT
CCACGGAGCTTCAGCTAACGGAGGCGCTGAGACCGGCCACAGGACAGCTG
GAGTCCCACATCCACAAGCTACAGCTCAACAAGAACGACCGGGCCAGCGA
CTGTTACTGTCTCACTGCGCCGCTCAATAAGATACATCAGGTAGGGCCAT
ATCTAGTCAAGGCATTTGTTACCTCCGTGTATGGAGACTTTGTTTTCGTT
ACGTCTTTTTTGTAGTTAGTTGAATACACTGTCAGTAGAGTGGCAGGAAG
TGAGTGGGAAGATGGTATCATTGGAAAGGTCAGGCTCACGGCAGCGTCAG
GAGTTCAGCTGAGTTGGTAGAATTAGTCATTTATCAGACATGGCAGACAT
TCCAATGCATACTTTATTTAACTTCCATATAATCATTTCTTTTACACTAC
CAGGGGAGTGTCTTGATGGGCGAATACTCTATCCGATGGTGGCGTGTGGA
AGTTGACTTCTGAAATACAACCACATACAAATACAATACATACAGGGTGG
TTAAATGTTCATATGATACTTTCTTTTGCTCTACCAGGGGAGTGTTTCAA
TGGGAGAGTACTCTATACAAGTCATGCACATTGACTGCATGCGGATGCTG
ACGACTCAAATAAAACCACATACAAATACAAAGCATACAGATTGATGTAA
CCTTAGCCTGGGACCTCCTCCCCCCCTACTTTGCCCCTCGCGGGGTTATT
TGGGGGTAATCGAAGTTGAAGTTGA

Coding sequence (CDS) from alignment at xfSc0003402:53..1577+

>Blg02453.1 ID=Blg02453.1|Name=Blg02453.1|organism=Branchiostoma lanceolatum|type=CDS|length=426bp|location=Sequence derived from alignment at xfSc0003402:53..1577+ (Branchiostoma lanceolatum)
ATGTCCGTCCCTTTTCCCCAGGTGAGTATAGGGAAGCAGGCGTCTCCTAT
CTGCTGCACGTGTGTGAAGGAGGAGATTGTGCCCATCGAGACCGTCATGC
CCGTGGACGCCTCGATCCGCCTCAAGTCCCTCCTCATGGACGCGCTGGAA
CAGATCCATTACGACGAGCCCTTTCTGCTGCTCACCGACATCAGCTGTGT
CTCGCCGTGGTCGATCACCATCAGCTCCACGGAGCTTCAGCTAACGGAGG
CGCTGAGACCGGCCACAGGACAGCTGGAGTCCCACATCCACAAGCTACAG
CTCAACAAGAACGACCGGGCCAGCGACTGTTACTGTCTCACTGCGCCGCT
CAATAAGATACATCAGGGGAGTGTCTTGATGGGCGAATACTCTATCCGAT
GGTGGCGTGTGGAAGTTGACTTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02453.1Blg02453.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02453.1-exon-xfSc0003402-1570713199:53..447Blg02453.1-exon-xfSc0003402-1570713199:53..447Branchiostoma lanceolatumexon
Blg02453.1-exon-xfSc0003402-1570713199:821..992Blg02453.1-exon-xfSc0003402-1570713199:821..992Branchiostoma lanceolatumexon
Blg02453.1-exon-xfSc0003402-1570713199:1256..1577Blg02453.1-exon-xfSc0003402-1570713199:1256..1577Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0003402genomexfSc0003402:53..1577 +
Properties
Property NameValue
GeneIDBlg02453