Blg02489.0 (mRNA) - B. lanceolatum

Overview
NameBlg02489.0
Unique NameBlg02489.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000244:100103..103767+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02489.0 ID=Blg02489.0|Name=Blg02489.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3665bp|location=Sequence derived from alignment at Sc0000244:100103..103767+ (Branchiostoma lanceolatum)
GTTTAGAGGTCGTTTATGCTTTTTATTTGTTGTTCTATGTAAATACAACC ATTAAAACCATTTTGCTAACACACCTTACGTAGTCCCTATTTTTAGACCA CACCCACGGTAATCACCGGTCGCATTCGTGCACGGGTCAATTGATCTGTT AACAACCGGGCGAATGCAATTTATTCACGGGTAAAGAAGGTTAGGATAAC CTCCTACTGTCGCCTTTTTCTTAGTCCTTTGACTTTCTTCGTTGTCACTA GTTGTATTAGTTTGGTCTTCGTCACTTTCTGTCGAGCCAAAGATTATCAA CAGCGACGTCGATGAAATACTTGTCAGAGTAATTAAGTTCGAGATCTCCC TGCATTTCGTGTGAACTCGACCTTGACTGTGCGAGGCTGCGTCACAGAAA TGACGTTCCTTATTCGACAGGACTTGTTTTGAAGACGCACTGGGGATATT CCCACCGTAGTCGTCTGAAATCGTGGACAGATTCACTTGAATATTTCTAA GAGACGGTACCGTACTCAAGTAAAGTGAACCGAGAGGAAACATTAGCAAG ACACTACGAAGGAGTTACGTCGACGACTGAACCCTTTCCAATTCGACTAT CCATGGGTGACTGTGGCGGAGGTTTCGGCGGCAATGATGGTGGGGGAGGA TTCAGTAGTGGTGGCGGGGGGTTCGACGGAGGAGGAGGGGGATTCAGCAG TTGCGGGGACGGTGGTGGCTTCGGTAGCGCCGGAGGCGGGTACGGTCATG GCGGTGATGCGTCGTCATTTGGAACCGGCGGCCACACGACCCATCCGCAA GGTGGCGTCTTCCCCGGCTCCCATATTTTTCACGGAGGCGGACGAGGCCT GAACAGACGGTATCACCACAACTCCCCTGGGTTCAAATATGCTGGACACC GTACCAATAACCCAGTGGCCCTGGCCCTTTGTCCTATGATCGCTGGCATG GTCTTTTTGATCCAGGGCTGTGTATATACCGGTGTCGGATTCAGCAGAGA GGTACTGACGCCGTTCAAAGTGATCGGGCCCACGTTTCTGTGCCTGGGCC TTGTACTCCTCCTGCTGGCGTGCTTCTGGTGTAAAAAGGCCCGGGACGCC GCCAACCAGCAGGGCGGACAGCCCACGGTACAGGTGGTGGGTTCCACCGC CCCGCAGCCGCCGGGAGGCCTGGGGGTGGGGCAGACCGTCGTGACCGGCG CACCGGTAGGCCATGTCGCCCCGACCGTGATGGCAGAGATGTGTCCAGTA GTGCAGCACCCACCCTATCCCTCAAGGTATTTAAAGGCTTCTTTTAGCCG TGGTGAGTCTTGGAGTAGCCTCTAGCAGGCTCCAGAGGCGGTTGAAAAGA GTAGAATTTGGGCAAATAGACAGAAAACATGCCAGAGGAGTTAGTGCTCC AAAGGAGTACAGTTTGCCGATCTAAAAGTGTTCTCCTTTAGCAGACTAAC TGCTCTGGCATGTTATTTGTCAATTTCGTCGATTTCTACTCTTTCCAGTC GCCTCTGGAGCCTGGTAGAGGCTACTCTTGGAGGACTTCTTATGCTTGTA TCCGCCTGTTGCAATGAAGAAATTGTGACCTTCTTCCGATTTGCCCCGTT TTCTGTCAGTTGGTCTATCAGAAAACGGAGCAAATCAGGAGAAGGTCACA ATGGCCTCTGACTGCCTCGTTCGCAAATAGCCATCATCACCTTAGGTCAC GTGATCGAATAAGAAGCCTTCTTGAAATGAATATTCAAATTACCGAAAGT TATTGGCATCAATAGCACATGATTACAGTTATAATCTCTATTGTCTTCAC CTCGTTTCGACCAGGATGCAGGCCCACTGGCCTGGGGCCACACCTAGCGA CGGGCGAACGACCACACCCCCGGGGAGCCACGCCTACCAACCGTCTGGCC ATGCNTACGGTCATGGCGGTGATGCGTCGTCATTTGGAACCGGCGGCCAC ACGACCCATCCGCAAGGTGGCGTCTTCCCCGGCTCCCATATTTTTCACGG AGGCGGACGAGGCCTGAACAGACGGTATCACCACAACTCCCCTGGGTTCA AATATGCTGGACACCGTACCAATAACCCAGTGGCCCTGGCCCTTTGTCCT ATGATCGCTGGCATGGTCTTTTTGATCCAGGGCTGTGTATATACCGGTGT CGGATTCAGCAGAGAGGTACTGACGCCGTTCAAAGTGATCGGGCCCACGT TTCTGTGCCTGGGCCTTGTACTCCTCCTGCTGGCGTGCTTCTGGTGTAAA AAGGCCCGGGACGCCGCCAACCAGCAGGGCGGACAGCCCACGGTACAGGT GGTGGGTTCCACCGCCCCGCAGCCGCCGGGAGGCCTGGGGGTGGGGCAGA CCGTCGTGACCGGCGCACCGGTAGGCCATGTCGCCCCGACCGTGATGGCA GAGATGTGTCCAGTAGTGCAGCACCCACCCTATCCCTCAAGGTATTTAAA GGCTTCTTTTAGCCGTGGTGAGTCTTGGAGTAGCCTCTAGCAGGCTCCAG AGGCGGTTGAAAAGAGTAGAATTTGGGCAAATAGACAGAAAACATGCCAG AGGAGTTAGTGCTCCAAAGGAGTACAGTTTGCCGATCTAAAAGTGTTCTC CTTTAGCAGACTAACTGCTCTGGCATGTTATTTGTCAATTTCGTCGATTT CTACTCTTTCCAGTCGCCTCTGGAGCCTGGTAGAGGCTACTCTTGGAGGA CTTCTTATGCTTGTATCCGCCTGTTGCAATGAAGAAATTGTGACCTTCTT CCGATTTGCCCCGTTTTCTGTCAGTTGGTCTATCAGAAAACGGAGCAAAT CAGGAGAAGGTCACAATGGCCTCTGACTGCCTCGTTCGCAAATAGCCATC ATCACCTTAGGTCACGTGATCGAATAAGAAGCCTTCTTGAAATGAATATT CAAATTACCGAAAGTTATTGGCATCAATAGCACATGATTACAGTTATAAT CTCTATTGTCTTCACCTCGTTTCGACCAGGATGCAGGCCCACTGGCCTGG GGCCACACCTAGCGACGGGCGAACGACCACACCCCCGGGGAGCCACGCCT ACCAACCGTCTGGCCATGCCCACCAACCGTCGGACCACGCCTACCTACCG TCGCACATCGCCCCAGCCCCTCCCCCTTCTTACTATGAAGCTACCCGTAC GGACATATCGTCAAAGCCGTAGACTTACTTATCTCTTATGACACTGGCAG TGCGGCTGATAGCTTGGTTCTTTTTATTACCTTCCAAAATGAAAGACACA GAGAGAGCACGGAAAGCAAATAATCGAAGAACCCTTCCAATTATTAAAAA AAAAACAGATCGATAATCCAAGGAACGACAAAAATGGATTGTATACAACA TGGAGATGACAAAAAAAACCTCCATAATGAATCCGTCTAAACATGTCTAT CCTTTTACAGTAATTCTATCTAACACTATTTTCTTCCATTCATCAGCCTT TGAAAAATTGCCTGTTCCTTTTGCTATGATATCTTATAGATTCATAGCTG TATTTGTTATTTATGTTTCAAAAAGAGAGAAGAAGCTACTAGGTGATCAA CATAAGTTTAGCAATAGTCCACAGTTTGTCTATTTTTTTAGTTTTTCAAT GTTAGAATGTAGCAGCGTATAAATTCATCCGAAAATAATTTCATCAGGTT GGTAGAACATAGGAT

Coding sequence (CDS) from alignment at Sc0000244:100103..103767+

>Blg02489.0 ID=Blg02489.0|Name=Blg02489.0|organism=Branchiostoma lanceolatum|type=CDS|length=867bp|location=Sequence derived from alignment at Sc0000244:100103..103767+ (Branchiostoma lanceolatum)
ATGGGTGACTGTGGCGGAGGTTTCGGCGGCAATGATGGTGGGGGAGGATT
CAGTAGTGGTGGCGGGGGGTTCGACGGAGGAGGAGGGGGATTCAGCAGTT
GCGGGGACGGTGGTGGCTTCGGTAGCGCCGGAGGCGGGTACGGTCATGGC
GGTGATGCGTCGTCATTTGGAACCGGCGGCCACACGACCCATCCGCAAGG
TGGCGTCTTCCCCGGCTCCCATATTTTTCACGGAGGCGGACGAGGCCTGA
ACAGACGGTATCACCACAACTCCCCTGGGTTCAAATATGCTGGACACCGT
ACCAATAACCCAGTGGCCCTGGCCCTTTGTCCTATGATCGCTGGCATGGT
CTTTTTGATCCAGGGCTGTGTATATACCGGTGTCGGATTCAGCAGAGAGG
TACTGACGCCGTTCAAAGTGATCGGGCCCACGTTTCTGTGCCTGGGCCTT
GTACTCCTCCTGCTGGCGTGCTTCTGGTGTAAAAAGGCCCGGGACGCCGC
CAACCAGCAGGGCGGACAGCCCACGGTACAGGTGGTGGGTTCCACCGCCC
CGCAGCCGCCGGGAGGCCTGGGGGTGGGGCAGACCGTCGTGACCGGCGCA
CCGGTAGGCCATGTCGCCCCGACCGTGATGGCAGAGATGTGTCCAGTAGT
GCAGCACCCACCCTATCCCTCAAGGATGCAGGCCCACTGGCCTGGGGCCA
CACCTAGCGACGGGCGAACGACCACACCCCCGGGGAGCCACGCCTACCAA
CCGTCTGGCCATGCCCACCAACCGTCGGACCACGCCTACCTACCGTCGCA
CATCGCCCCAGCCCCTCCCCCTTCTTACTATGAAGCTACCCGTACGGACA
TATCGTCAAAGCCGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02489.0-exon-Sc0000244-1570713199:100103..101378Blg02489.0-exon-Sc0000244-1570713199:100103..101378Branchiostoma lanceolatumexon
Blg02489.0-exon-Sc0000244-1570713199:103082..103767Blg02489.0-exon-Sc0000244-1570713199:103082..103767Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02489.0Blg02489.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000244genomeSc0000244:100103..103767 +
Properties
Property NameValue
GeneIDBlg02489