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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0001148:4639..11182+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02544.5 ID=Blg02544.5|Name=Blg02544.5|organism=Branchiostoma lanceolatum|type=mRNA|length=6544bp|location=Sequence derived from alignment at Sc0001148:4639..11182+ (Branchiostoma lanceolatum)
CAGGATTGCGGATGGGAACAACTCTTGTATCTGGCTTCCTTGAAGGCTAT
GACGTCAGCACTGAATACACATCAGACGCTTCAGCTGACTTTCAGTCATT
TATCACCGACCCTCGTTATACAAAGGACATCACGGATCGCTGGCTCACGA
ACAGGTATCAAACTTTATTACTGCTACTAGAACTGAACTAGAAAATACAC
TTCCTTAGCCAACTTTATACATGTCTTTTTGGAAATCCTGGAGATAGATA
AAAGATACATAATGCATCCACAATATATAAAAAGTTGTACGGCATGTTAC
GTATACCTGTTGCACGGATGTCCTTTAGTTACCAAATATAACCGTATTTA
AAGATACTTCTTTACACAGGGTGAGTTACTGGTTGGACGTTAATTTCTTC
GTGACCACGCTGGGAAATGTGGAGGTACCAGGTCCCATCAACATCACCGT
GCCAATCAACACAACACAGATAGAGCCGGGACTGGAACAACGACTGCTTT
ACTGGAATTTGGGTAACATATTTATGCTTCGGTCCCAGAAGCTACTTATT
TGTCCCAGTTGATTGCCGGACACAGTGGGGTGGGGGTGGGTACCTCTCGG
TATTCTCACGATTAGCTTACTGTGTTCACTTGTTACGGGGTCCCGGATTG
ATTTTAACTCCAAGAACAAAAGAGAATCATGGACAATGGACAAGCGTCAC
GCAGACTACACTACCTGAGGCTTCTGTCCAAGCAAGGGACCAGCGTTTCG
GACTTAGTCCTAGTTTACCTGTCCCTTGTACGCCCAGTTCTTGAATACGG
GCATGTCCTTCTTGTTGGGTGCAGCAAGGAACAGGAACGCCAACTGGAGC
AAGTACAACGGCGAGCTCTTCGTATCATCAGCCGAGCAGGCCGGCGTGAT
GTGCCTGAACTACCCAGCCTCAAGTCTAGGCGCGAGGATGCCGCTGTCAA
ACTTTTCAAACAAATGCTCAAAGATGATCACCCCCTACACGATCTCGTCC
CCCCCTGTAGATCCGCAGCCACTGGTCGGTCACTCAGGAACAAGCACAGC
ATCTCCATCCCCCCAGCTAGAACCAAAAGACTACAGGACTCTTTCCTACA
TAAGGCAATCAGTTTGTACAATAATCAGTAGCACCTAATGTGCAATAACG
CTTGGATGTATATATTGATATATTTGTTATATTGTATTTTGTATATAGGT
GTTTTCTTTTTTATTGTGGATACATAGTGTCTGACCAACAGAGGCCATGT
AAATATCATCGCCATCCAGGCATGTTATTTTGTCTGTAAGATGTGATATT
TTTAATAAAGAAGAAGAAGAAGCACAATGAAGTGTTTGTTCTCCATATCT
AGGACAGGGAGAATGGCAGGATGCACAAAGAACATGTAGCAGAGGCGGGA
AAGCTGAAAAGCCCATAGAGTGGACAAAGCACTTTGCAAGTTTCCAGGTA
CATGTATTTCCTCTCATCACCAGTCATTAATTACTCCATGACGTTGCCTC
GCTGTTTTATCGACAATCTCCTCTTACATACCTGTCCTATCTGTGACTGC
TTTTAGCTATGCACAGACTGAAATAACGTTTGAAATAAGTAATTGTGAAA
AATATTTTAATTGTCACTTTCTTGGCATGGCAAGGTCTTTTAAAGCAAGT
CAGTTGAATACATTATATTCTGCTCATTGCAAGGTGTGCAAAACCAATGC
GTACAGCACAAAACGAGACTCTGGACGAGTCCGGCTGCTCAGAACTGAAG
ACGAGGCCGTGGAGTTCTTCAAAGGTTCCACGCATTTCTCCCTCGCAGTG
GTTAACAGAAACGTCTTCAACTCTCCCCCCGTCATCACTTCTGACACGCA
CATAGAACTACGTGAGGATGAGGAAAGAGCGATCTTAATCGAGTATTTTG
ACAGCGATAACGATCGTCTCTCCTTTTCCATCACCGTTCCTCCCCGGTTT
GGAAGTGCCAGACTACATGACGAAGAGGTTAGCGTCAGTCCTCAAGTTTA
ACCGTTTGTTATCGCGATTCTTTATGTCAATACACTAAAATCCATCTAAA
CGTCTGGAACAGGCTCGGAAATAGTTTATGCCTGACTAGTTTACAAGATA
AGAAGGCCGTCTCTCCCTTTACCCCTGTCACAGTGCGTAAAGCTCAATCG
GACGACGAGTCTGTGAGCTCTGAATGACATTTTCGGCAGTAACATTTCCG
TTGTTTCCTCGATCGGCGCTCGATCTTTAGAGATCGTCAAAACAACCTAG
AGTCGGCCGATGGTCGCTGCTCAACGAAACCCGAGCCTTACTCGACATGG
TCGATTTTTAGGTGAAAAAATCCGCAACCCTCTGTCGATCCTAAAATGGT
CCGACCTTCCAGCGATCAGAAAGTACGGCCGAAGCTAGTAGACAATGTGG
CAGGGGTATTATGGCATTCGGATAATACAAACTGCCGTGCTCAACAAATT
TAGATTTATCGTAACATTGCCTAAACTTTTACACTTACATTCACATTTTA
TCAAGGTTAAAGAAACGTCGATCTTCAATCTTACAAATAAACACAGTGGT
CTAAAAATTACTGATACCGAGTCAAGAACTAGAAAATGATAGAATAATGT
CGAATTTACAATTCTCCTCTACTTCTCCTCTACCCCAGGAGTTCCCCATT
ATTTTGTACAAGCCCTGCCTGGACTGTTACGGCACAGACACAGTCAACAT
CTCTGCTGTAGAAATACTAACAGACAACATGAACCCGCACAGCATCAACA
TAGAGCTGGTGGTGGAGGTGAAGGCCCGCAATGACGACCCCGTCCTGTTT
GTCATAGTAAACGACAGTCTCGTTCCCATGGTTCCTGCACTAGCCATAGA
ACTGACTGTTGAGGTAAACCGTCTTTCCAATGCCGGGTACACAGACCTGC
AGATAATTGTAGCTGCATATGATGTAGATAATGCAGACGAGATAAATCTG
GCCATCCAGGCACAAAGTGACTGCACTCTACTGATATCAGATGGAATACA
TCAGGTTAGCTTTGATAATAACCACCCATGCAGAGGACAGAACAACTGGT
TTTCGGCTGTAGACGTGTACGTGAAAAACGGAACAACAGGACCACTTCAG
CTGGATCCATGTGGACCGGAGGTACCACATCCTCTCCAGGACATGGGCTG
GGTGTTCACAAGGCTCACCTACAGACCGGCGATAAACTTCACAGGTAACT
CTTATGATACTTTATATCTGACTAAATGAGGTGGGTACATATATTTGAAA
TCAAATTGACGAGCTCAGTGTCATAGTAAATCAGTACCTTAATTAATGTC
GTTGCTAAAAGACTCGTTTATAGGATTGGTTTTACACAATTAACGTGCGG
TTTCATCCAGACTATTCTGGGCATAGACTTGTTAACAAACACGGATCACT
TCTGGATTATGTCACAATATTGAAACAAATCAAGTTCGTTCTAATCTAGG
GCAGTGTCGAAGTTGGGACACCTTGCGATATGGATACTACTTTGTGCCTT
GTTATTTTAGTGGTTTTGTTATTCTATTCCTAGTGTTATAACTGTTGGTC
ATATGAGTGATCTTTTGCTGTACCAAAAAGACTTCCTTTTTTAACTTGAC
CTTCAGGTAGGGATATTATCAAGGTCATTGCACGAGATGACCACGGTGGC
GTGTCCAAGGTCATGACCCTTGACCTGTACGTACTGGAGAATCTCTGCCA
ACATGGCGGTGTGTGTGTTGGTGACGTCACAGATCCAAACTGTTCGTCGA
CGCAGCGCAGTCAAGGCTTTAACGGGTAGGTTTTGATTTGGTTTTTAGTC
TGTAAAGGTCTACATATAAATGCTGGTTTTCCACATACAGAAGTGCTATA
GAATCTTACACAGAGCAAACAGAAAGTAACCGATATTTTCTAAAAATACT
GCAGGTACTGGTGTGACTGTACCGGTACATCTGGGTGGTCAGGCAGACTC
TGTGAACTCGACTTTGACGACTGTTCCTCCATACCGTGTCCGACAAATTA
CACCTGCATTGACAAGGTGAAGTAATGCTGTTTACTTCCTATGATATGAT
TGGCGGAAACGAAATGAATGGGCAGGTTAAGGACAGTTGTGATTGACGGA
TACTAGGCTCTTACAGCTAGAATTGTACTAGAAATTCACCGTGTCTAACA
ATCTTAAAAGAGCAGCATATCGGAATGTCCGTTATGGTATAAATGGCAGG
GAAAATGGGACATAGTGCCATAAATAAAGGGATAAGGTGAAGGGAAAAGT
CGGCTAAATTAGGAATGAAATGTAGTTCACTAAAAGACAGCCAGCACTTT
TTGGTAAACAATCTAGCGGATATCGAAAATGTCTCGTAATACATTGCATA
TTATTCCAGGCACAGAGAATTATATGGGGTTTTGTTGAAAAGAATCATTC
TTAGTCCGTGAATAGTTCCATTCGGTTGGTAAGTCACTCAATAAAAACTT
TCGGTAACCAGTACTATGTGAACCAGTCAGAATCACTTTGAAGAATGTGA
CAGATGGTCACCGAAACGTCGGTGGAATAAATCTCTTAGGTGTGTAAAAA
GAGTCTTTCTATTCAATGATTCCTAGTAATAGTAGAGATTTTATAATCTC
ATTCATAATTTCATCAACTTTTTGAACAGCTGAATGGTTACATCTGTGAC
TGTGGGGATCCCAGCTGGCCGTGCGGGCCGGGCCTGGAGCCCTGGGAGGT
CGGTGTGATCACAGGAGGTGCGCTGGCGGCCGGGCTTCTCATTCTCCTGT
CGTTCTTCTTGTGGAAGAAGTGGCAGAAAGCCAGGTCAGTTCAGCAACAC
AGAATATTTAGATTATGCCCTCAATGGGATATAGGATATAGATTTGTTGT
AAAAATCCCATTATTCTAAGTCAATAAATTTGCTATAGTTTGATTATATT
ATTCTATCAATGGTATCGGAAGCATATTTAACATGCCAGCAAAATTCAAT
ATTTCCTGATGATATTCCTCAATAAATACATCTTTCTGATGTTGATGACC
ATTGCGTCTTACAAATTGCACTTACAGTTCTTGATATGTCACCAGATGAT
CAAATTGATTTCCACGCAGGACATCATAGTAAACACAGCAGTCGTTTTGG
AACCTCGATCTAGTTCAGTGGAGTGTCAGGTCTTTCATGTTTTTTCATTC
CATCTTTAGTCCTAATCCCAGCAAGACTGGCTCAACGTTTCTGAGACGTA
CGAAAGTGACCCCAACTACCATGTCTCTACCCAGTCTGTAAGTCAGATAT
CATATTAGATATTGAACCTGTGTTTGTCTCCGATCTTACTGTGCTGTATA
GCCAATATAACTACCGTTCGGCGGAACGCACCAAATGTAGGCATTGTGCA
TCCTTGTTTCTTCCTCTTAGATAGGTTTACTTAACACTATATCAGCTGGC
CTAAATGCCATCCTACATCTACATATGTGATATTCCCAAATAATCCCACC
AGGGGCAATGTAGGGATAAATTAGATAACAGGCTCAACTACCTAAGATAG
CACCTAGGCTAACCCTTAGGGAATACCAGTAATGAATTTCATACAAGTCG
TCATTTTGCAAACTAAAAGTAAGAAAACATCAGTGGTTCTAACTTTTTAA
TTTCCTGTTCAGGTCTAGCAAAGTCAGCAGTAAACCTGGAGATGGACCAG
CCGGTGTCGACAATGACGCCTGCCCCCCTGAGGCATCCAACTCCAACTCT
GACGTCTCCCCCGGCACCGACGCCTTGTCTTCATCGGGGAGACCAGACTA
CGCCACGTTCCTAAATGTAAGTGCCTAGGACTCGACCAGGCGTAAATAAG
TTATATTTTGCAATTGGAAACGATAATTCCGTTTAAAACTGTTGCAGTAA
CATTGTTAAGAAAGTTGGTCCGTACAAAATTGTAGCCTGTTTAAAATGAA
GCTTGCTAACTCCGACCAATCAAACGCATTGAAACTCAGATTCGAAGCAG
CCATTTCCCGACAAATCCCTTTCTAAGTTGCGTTATCATATCCGCGATTT
AACGTTTAAAGAAAAGTAGTAGAAACTATTTTTTGTAAACGTTAAATCGC
GGATACGGTCATTACTTCCAAGGTGCCAAAATTGTCAATCTGAAAACATC
TTTGGAAAGCTGACACCTTCCAGCATCTCACTGGAGTTTGTTTGGTCAGA
TGAAGTCGTTAACGCAACTTAGAAAGGAAATGGCTGCTTCGAATCTGAGT
TTCAATGCGTTTGATTGGTCGGGGTATTGCTGCACGTGGTAGAAAGTACA
GCCCTTCACATAATCGTTCTCTCAGGTGCCCCGCGCTTGGGAGAGTCGTG
ACGATGCGGAAAGACAGGCTGCTGCCCTGCTCAACTGGGAATGGAACCCA
AAACACAGTGTGGAGGGTTTGGATCGTCCCACAGGCCGCCTGGCCAGACC
TGCCACTGAGCTGAAGGAACTGCGCGGGGCAGCTGGCAGGAAAGCCTTCC
CGTGAACATCCAATGGGCACCCGACGTACTAACCTCAGAACGTGGCTCAC
ACCAGGGTTCACATCATCCTTAGTCCTGGGTGTTGTAGTTTCTT Coding sequence (CDS) from alignment at Sc0001148:4639..11182+ >Blg02544.5 ID=Blg02544.5|Name=Blg02544.5|organism=Branchiostoma lanceolatum|type=CDS|length=2010bp|location=Sequence derived from alignment at Sc0001148:4639..11182+ (Branchiostoma lanceolatum)
GGATTGCGGATGGGAACAACTCTTGTATCTGGCTTCCTTGAAGGCTATGA
CGTCAGCACTGAATACACATCAGACGCTTCAGCTGACTTTCAGTCATTTA
TCACCGACCCTCGTTATACAAAGGACATCACGGATCGCTGGCTCACGAAC
AGGGTGAGTTACTGGTTGGACGTTAATTTCTTCGTGACCACGCTGGGAAA
TGTGGAGGTACCAGGTCCCATCAACATCACCGTGCCAATCAACACAACAC
AGATAGAGCCGGGACTGGAACAACGACTGCTTTACTGGAATTTGGGACAG
GGAGAATGGCAGGATGCACAAAGAACATGTAGCAGAGGCGGGAAAGCTGA
AAAGCCCATAGAGTGGACAAAGCACTTTGCAAGTTTCCAGGTGTGCAAAA
CCAATGCGTACAGCACAAAACGAGACTCTGGACGAGTCCGGCTGCTCAGA
ACTGAAGACGAGGCCGTGGAGTTCTTCAAAGGTTCCACGCATTTCTCCCT
CGCAGTGGTTAACAGAAACGTCTTCAACTCTCCCCCCGTCATCACTTCTG
ACACGCACATAGAACTACGTGAGGATGAGGAAAGAGCGATCTTAATCGAG
TATTTTGACAGCGATAACGATCGTCTCTCCTTTTCCATCACCGTTCCTCC
CCGGTTTGGAAGTGCCAGACTACATGACGAAGAGGAGTTCCCCATTATTT
TGTACAAGCCCTGCCTGGACTGTTACGGCACAGACACAGTCAACATCTCT
GCTGTAGAAATACTAACAGACAACATGAACCCGCACAGCATCAACATAGA
GCTGGTGGTGGAGGTGAAGGCCCGCAATGACGACCCCGTCCTGTTTGTCA
TAGTAAACGACAGTCTCGTTCCCATGGTTCCTGCACTAGCCATAGAACTG
ACTGTTGAGGTAAACCGTCTTTCCAATGCCGGGTACACAGACCTGCAGAT
AATTGTAGCTGCATATGATGTAGATAATGCAGACGAGATAAATCTGGCCA
TCCAGGCACAAAGTGACTGCACTCTACTGATATCAGATGGAATACATCAG
GTTAGCTTTGATAATAACCACCCATGCAGAGGACAGAACAACTGGTTTTC
GGCTGTAGACGTGTACGTGAAAAACGGAACAACAGGACCACTTCAGCTGG
ATCCATGTGGACCGGAGGTACCACATCCTCTCCAGGACATGGGCTGGGTG
TTCACAAGGCTCACCTACAGACCGGCGATAAACTTCACAGGTAGGGATAT
TATCAAGGTCATTGCACGAGATGACCACGGTGGCGTGTCCAAGGTCATGA
CCCTTGACCTGTACGTACTGGAGAATCTCTGCCAACATGGCGGTGTGTGT
GTTGGTGACGTCACAGATCCAAACTGTTCGTCGACGCAGCGCAGTCAAGG
CTTTAACGGGTACTGGTGTGACTGTACCGGTACATCTGGGTGGTCAGGCA
GACTCTGTGAACTCGACTTTGACGACTGTTCCTCCATACCGTGTCCGACA
AATTACACCTGCATTGACAAGCTGAATGGTTACATCTGTGACTGTGGGGA
TCCCAGCTGGCCGTGCGGGCCGGGCCTGGAGCCCTGGGAGGTCGGTGTGA
TCACAGGAGGTGCGCTGGCGGCCGGGCTTCTCATTCTCCTGTCGTTCTTC
TTGTGGAAGAAGTGGCAGAAAGCCAGGTCTAGCAAAGTCAGCAGTAAACC
TGGAGATGGACCAGCCGGTGTCGACAATGACGCCTGCCCCCCTGAGGCAT
CCAACTCCAACTCTGACGTCTCCCCCGGCACCGACGCCTTGTCTTCATCG
GGGAGACCAGACTACGCCACGTTCCTAAATGTGCCCCGCGCTTGGGAGAG
TCGTGACGATGCGGAAAGACAGGCTGCTGCCCTGCTCAACTGGGAATGGA
ACCCAAAACACAGTGTGGAGGGTTTGGATCGTCCCACAGGCCGCCTGGCC
AGACCTGCCACTGAGCTGAAGGAACTGCGCGGGGCAGCTGGCAGGAAAGC
CTTCCCGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02544.5-exon-Sc0001148-1570713199:4639..4792 | Blg02544.5-exon-Sc0001148-1570713199:4639..4792 | Branchiostoma lanceolatum | exon |
| Blg02544.5-exon-Sc0001148-1570713199:5008..5150 | Blg02544.5-exon-Sc0001148-1570713199:5008..5150 | Branchiostoma lanceolatum | exon |
| Blg02544.5-exon-Sc0001148-1570713199:5991..6085 | Blg02544.5-exon-Sc0001148-1570713199:5991..6085 | Branchiostoma lanceolatum | exon |
| Blg02544.5-exon-Sc0001148-1570713199:6322..6615 | Blg02544.5-exon-Sc0001148-1570713199:6322..6615 | Branchiostoma lanceolatum | exon |
| Blg02544.5-exon-Sc0001148-1570713199:7277..7832 | Blg02544.5-exon-Sc0001148-1570713199:7277..7832 | Branchiostoma lanceolatum | exon |
| Blg02544.5-exon-Sc0001148-1570713199:8245..8413 | Blg02544.5-exon-Sc0001148-1570713199:8245..8413 | Branchiostoma lanceolatum | exon |
| Blg02544.5-exon-Sc0001148-1570713199:8543..8654 | Blg02544.5-exon-Sc0001148-1570713199:8543..8654 | Branchiostoma lanceolatum | exon |
| Blg02544.5-exon-Sc0001148-1570713199:9268..9422 | Blg02544.5-exon-Sc0001148-1570713199:9268..9422 | Branchiostoma lanceolatum | exon |
| Blg02544.5-exon-Sc0001148-1570713199:10251..10404 | Blg02544.5-exon-Sc0001148-1570713199:10251..10404 | Branchiostoma lanceolatum | exon |
| Blg02544.5-exon-Sc0001148-1570713199:10914..11182 | Blg02544.5-exon-Sc0001148-1570713199:10914..11182 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001148 | genome | Sc0001148:4639..11182 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02544 |
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