Blg02856.1 (mRNA) - B. lanceolatum

Overview
NameBlg02856.1
Unique NameBlg02856.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000037:650032..654674+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02856.1 ID=Blg02856.1|Name=Blg02856.1|organism=Branchiostoma lanceolatum|type=mRNA|length=4643bp|location=Sequence derived from alignment at Sc0000037:650032..654674+ (Branchiostoma lanceolatum)
CATTTGACAGCACAGAGATGATTTCAGATCCTAGCAAATGCAAAACACAC AGTCATAAAGCAGTCAGTTTACCTTCTTCGTCGAGACTGACGTCCCGGCT GCGTACACAAGAGGCCGCCAACAGAACGATCCCCGCGATCGCCACGAAAA CTGGCCTCATCTCTGCACGATGCTTCTGGGTTCAGGAAAAAACTCTGCTT CCGGAATTTGGCACTGTCGAGCAGCGGTCTGTGAGTCTGACGCAGTTCAG TCCGCCATCGTCATGTTTGAAATACCAACGATCCCGGCCAAAGTGACTCC ACCAGGAGAACCCCTCACATGAGTCACTTCCTCCTTTTCAAAAGGCTGGT GCATCCAACGAACTCCTCCCTCCAAAAATAACACTTTTTCAACCCAAACA TGCTAGTGAAGCCAAACATTCACCCACCAATATGTTCTTTTATGATACAA CAATTAAACAGCCGTGTGAATGTAGCCATATGATATCATCAACTAAAAAT AGGTATGTATAAAAAGGAACTGTTTACTGATCTATTAGAGAATGGTAGAA TAAATACAACAGCCAAAAATGGATGTGTAGAGCAAGGTGATTGGTCAGAA ATTTCATCACGTGACTAAATAGTCCAACATGGCAGCCACCAGACCCGGTA AGTCCGGAATTTCTTCGAAGAATTTTGGGGTAAAAATAGTAAATATTGCC GTAATTTCATATTTTCCATAGCTTCTTGATTAGAAAGATTGTTATGGCGA CATTGGAAATGATATTTTGCCTGGTAATGTTGGTAAATACTGAATTCCGA TAGTTGACAGTCGCTGCTTATTATAGTTTTTACATACGTGGCAAAACCGG GAGGGAGGGGGGCACTTCCGGGTTAAAATGTCCTGAACTGGTTATGATTT GGCAATGGTTTCAGGTCGAATATAGACAAGTAAAATTCGTTTCTTCCTTA TTTACTCGACAAATAAAGCTTGTAGTCTCATAGACTTCTGGCATATTCCT AATCTGACCTTGAGTACCTTTTATAATTGACAGGAAACCCAGACCGAGGG TGGAATGACCCGCCCATGTTTATGTACGATGCCCAAAACAAAGCCCAGGA GTCACCAAGGAGGGCACTCCCGACAAAACGTGTGGCATTCCCACAAGGTG CACCGCCTCAGCCTGCAAGTAAGAACCTGTCATTTGTAGTCCATCACATA TTTAACTATATGACACCCTTTTGTTCTTGCCAAGGAAATCTTGATTGGAG TGTGTCAAGTAGTAACGTTAGTAGTGTGTCAAGAGGGACATTAAAGTATG AAGCCTCACTAGCGTGGACCCACTGGACAGAGCCACTTGGAAACATGGCG TGAAGACTAGCTGACTGTTGCCCACCTGTATAGTATAATCAATTGCTGGA TACTAACTAATTACCCTAGAAAAGAGCTAAATTCATACAATTACCTTTAA TTTTTTTTAAAGGTACACTTTTCTGCTGAATGTTATTAATGTTACATTTC ACTTCTTATCATTACTACCTATACTAGGGATTTAAGATCATGGGAAGATG AGCATTTTTTGCATCCATTGCCAAATTCTACTCTACTCTACTCTACTAAT AAGACTATCTTTTGCACCTAATGAAGTGTTATGTATTTTTTTTAAATTCT AGTCTTGCCATGTTCTGTTTTACTGCAGATGCCCCAAGCGTACCTCCAGC AATACCACCAACAGGAGATGTCCCTATAAGAGCACCTCCAAAACTATCAA CTTCCCCTCCGGACTCCATCCTCTTCACCCCTACAGATGGTACAGTCCAG AGTGGTACCCCTGTAGGACCTGTCCTCATGCCCCCTGTGACTGACACAGC CCTCCCACCACCCCCCTCCCTCGGACCTACCCTACCTGTTGTCGTCAATG GGCCTCTCTTACTCAACCCCAACAGCCCTCAAGTTTTAAGTACGTTTTCT GATACTGCAAAGAAGACTCCTGAGAAAGCTGAGGATATGGTCAAGGAACG TGCAAGTGACGATGATGGAGATCTTTGTAGGAGGAGTATGGAAAGTCTCA GGAACACCTTACGTGCAGTCAGTGCTCTTGGAGTGGAAGTGAGTTGTTTT TACGGAGGGCTTTTTCTTTCATAGTTGTCTATATGAAGAAGAAAACATTC AAGAAAACAAAACTCTTTTAAAAGAAGACTTAGCCCAACAGGAAAGTTAT AATTCATCATTTGCATCACTTTCTTTAGTTAACATTCTCCTACACAGAGC TTTGGCTGTAGTCATTGCAATTTACAATATACCTTGGGGAGGCTCTGCTA ACGGGACTGAGGTGTCCACTTTTGTTGGTGTGGCCTCTAACCAGCTGTCA GCAAATCACCTTCTTTAGGTAAAACTGATTCTCACAAAAGTGGAAACCTC AGCCCAGGTGTATTGTATAGGCTGCAGATGAGGCTCTGCGTGGGAGAATG CTGGTTAATACCCATTATGTTTTTCACAGCAACGAGTGAGTGATGAGGTT GGCAGGAGGCTGACCATGCTGGAGAATATGTGGACAACTGGGAAGCTGTC CAGGCCAGTTCAGGTGTATACTGATGTCCTGGCTTCAGGTGTGTTACCAA TCTGTGGGTTTTTAATTCCCTCATTTTCAGATTTGAAAAAAATTATGCCG AACTGGATTACGAGCCATAAAATAAACAACCAAATTTGGCAGGATTGGGC TTGCCAATACATAACTAGCCGCTTTGTTTTATCAATGGAAGTATGCAATT GTAGTTAGTTGAAGAGTATGAAGACTCACAAGACTTATTTCATCAGTCAA ATATTTCCTTATCTCATTTTCTCAGCCCTGAATGACCGTGATTGTGACTT GGCCCATGACATGCACCTGAAGCTCATGATGGACCACGTGTCTGAGGTAA ACTGTGCTATTGGTTGTTTTTAAAGTTTCCAAAGGTTGTGTGGACAAGAC GAACTATTAGTTAGCAGGGTGAAAAGGTTTTACACAATGTTTTTGTATTT GTGAATATTATTCTAGGAAGATACATATACAGTATAAGCACAAATTGATT AAAAAATCATTTTCAAGCACTGTATTACAAATAAAGGAAATAGCGGAATC TCTATTGTATTCTATAGGTCAGGCAGTGGATGGTGGGGGTGAAACGGCTG ATCCAAGAAGCAAGAAACCTCCCTCAAAATCCAAGCAAGGCAGAAACAAC AGACACTCCTGAAGCTCAACAAACTGAACAAAACCCAGAGATGAACAAGG AGGAAGAAGAGCAAGAGAATGCAAAAGTTGATGAGACAAAACTGGATGAA CTCTCAATCAGTGATCAGACAGAGAAAGAAACAGAGAATACAGGCAATGA GATACAGAGTATAGGAAGCCCTGAGGAAAACTCTACAAATGATGATAAAA AAGAGGAAATTGTAGATTAACACCAGACAGTACAAAAGTCTTCCCACTGT AGAGGGATATTAGGATTGTTGCACTGAAAACCTTCTCTCGCTTAGGCCAC ACCAATTTCATTCCTTCATTCTCAGATGCTGAACTACAAGATCCACATGA AAACAGAATCTGTAGAAAAAGTCTTTACCTTGGTACATGCAGTTTTAATG ACTCAGTGGATAGTCATGTTGTTTCCTTCAAGCTCTCTGTTGTCACCTTG ATCTCTTGCTGGATTTGTACTTTAAATGTGTTTGAAAACCAAGAAATGAT TGGAAATGGCCTTACTGATCAGTGCAAAGATTCAATAAAATCCTATCAAT ATCAGGGGAATTAATATATTATTTTGTGCATCAGATATTTTCCCAACCTT TGCAAATGTCTCAATAACGTAAGTGGCCTATTTTTTCAATATCTGATAGC TGTTTCAGCATCTTGTATTGGAGCATATTATTATGTCAGTGATGAAATTA ACAAATCTTATCATTTTGAAAGTTGTGAAGCATTCCTGGGTGGTTGCAAG TCTTGTAGTTCTTTTACTTTACTAAAATCGTAAACCGTATATGCTAATAA TTTGTAAATGTAAGAAGTTATTTTTATACTAGATAGTGTACAGTGTTACA GCTAGATGACTTAAATGGTCTTTGAGATCTGAAATTATGTGAAATGTAAA CTGCTTTGTGGGGGCTGGTTTTATTGATATAACAGGATTTATATAGCTAT AGAATTTATAAATTAAGTTCCAGAGACATTGCAATTTTAGCATCAAATGA CGTGTGTAAAAATCTTGCAGAAATTTTAATGAATTGGAAAAGGCTGAATT ATGTGATTTGTACTCTTCAGAAGGAAGATTAGTGCAATAGTCAAGTCTGA CTTGTACTCTTGCAATTGTGTTGCATTCAGGTATGTGCCAGTAGTCAATA AAGGCTTGTGTTTTCTTCCACAATTTTCCTTTTACTAGTTTTAGAAATAG CATTTTCCAACCATTTTCATATGCAAGGAAACATCCTATAGCTTCATGTA TACATGCATCATTGTATGAATGAATTTATTTCAGGTACATTGACCCATAG GAACAAAATATGGACATACATACAGGTACAAATAGACATAACAATTGTAT ACCTTCTAAAAAAGGTGTTCCTGTAGTGGCAGTCAGATTTTAAAAGACAT TTTCTGACTCTGATATTGAATATTCTAACTATGAATAAATAAG

Coding sequence (CDS) from alignment at Sc0000037:650032..654674+

>Blg02856.1 ID=Blg02856.1|Name=Blg02856.1|organism=Branchiostoma lanceolatum|type=CDS|length=996bp|location=Sequence derived from alignment at Sc0000037:650032..654674+ (Branchiostoma lanceolatum)
ATGTTTATGTACGATGCCCAAAACAAAGCCCAGGAGTCACCAAGGAGGGC
ACTCCCGACAAAACGTGTGGCATTCCCACAAGGTGCACCGCCTCAGCCTG
CAAATGCCCCAAGCGTACCTCCAGCAATACCACCAACAGGAGATGTCCCT
ATAAGAGCACCTCCAAAACTATCAACTTCCCCTCCGGACTCCATCCTCTT
CACCCCTACAGATGGTACAGTCCAGAGTGGTACCCCTGTAGGACCTGTCC
TCATGCCCCCTGTGACTGACACAGCCCTCCCACCACCCCCCTCCCTCGGA
CCTACCCTACCTGTTGTCGTCAATGGGCCTCTCTTACTCAACCCCAACAG
CCCTCAAGTTTTAAGTACGTTTTCTGATACTGCAAAGAAGACTCCTGAGA
AAGCTGAGGATATGGTCAAGGAACGTGCAAGTGACGATGATGGAGATCTT
TGTAGGAGGAGTATGGAAAGTCTCAGGAACACCTTACGTGCAGTCAGTGC
TCTTGGAGTGGAACAACGAGTGAGTGATGAGGTTGGCAGGAGGCTGACCA
TGCTGGAGAATATGTGGACAACTGGGAAGCTGTCCAGGCCAGTTCAGGTG
TATACTGATGTCCTGGCTTCAGCCCTGAATGACCGTGATTGTGACTTGGC
CCATGACATGCACCTGAAGCTCATGATGGACCACGTGTCTGAGGTCAGGC
AGTGGATGGTGGGGGTGAAACGGCTGATCCAAGAAGCAAGAAACCTCCCT
CAAAATCCAAGCAAGGCAGAAACAACAGACACTCCTGAAGCTCAACAAAC
TGAACAAAACCCAGAGATGAACAAGGAGGAAGAAGAGCAAGAGAATGCAA
AAGTTGATGAGACAAAACTGGATGAACTCTCAATCAGTGATCAGACAGAG
AAAGAAACAGAGAATACAGGCAATGAGATACAGAGTATAGGAAGCCCTGA
GGAAAACTCTACAAATGATGATAAAAAAGAGGAAATTGTAGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02856.1Blg02856.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02856.1-exon-Sc0000037-1570713199:650032..650533Blg02856.1-exon-Sc0000037-1570713199:650032..650533Branchiostoma lanceolatumexon
Blg02856.1-exon-Sc0000037-1570713199:651065..651199Blg02856.1-exon-Sc0000037-1570713199:651065..651199Branchiostoma lanceolatumexon
Blg02856.1-exon-Sc0000037-1570713199:651710..652119Blg02856.1-exon-Sc0000037-1570713199:651710..652119Branchiostoma lanceolatumexon
Blg02856.1-exon-Sc0000037-1570713199:652511..652619Blg02856.1-exon-Sc0000037-1570713199:652511..652619Branchiostoma lanceolatumexon
Blg02856.1-exon-Sc0000037-1570713199:652857..652927Blg02856.1-exon-Sc0000037-1570713199:652857..652927Branchiostoma lanceolatumexon
Blg02856.1-exon-Sc0000037-1570713199:653149..654674Blg02856.1-exon-Sc0000037-1570713199:653149..654674Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000037genomeSc0000037:650032..654674 +
Properties
Property NameValue
GeneIDBlg02856