Blg02906.0 (mRNA) - B. lanceolatum

Overview
NameBlg02906.0
Unique NameBlg02906.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000037:1670630..1674638+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02906.0 ID=Blg02906.0|Name=Blg02906.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4009bp|location=Sequence derived from alignment at Sc0000037:1670630..1674638+ (Branchiostoma lanceolatum)
TGGGGATTGGCTGATGGTAAGAGTAAACATCCAATCAGGCGATCTGTTTT AAATCTTTGTAAGCAAATTTCGCGGGAAAACATGGCGGACAAGAAGGTGG GTCCACGCGTTCTGAATAATGTGTGATGAAAATTCATTTTGAACGGATTT ATAGCAAAATGCGTAAAAGTTACAGTTGTCCAAAGCTTTAAAAACATCTC TCAAATACTGTAGTGATGCTATAACGTACTGCTAGACGCTGACATTGAGG TTGAAAGGGAAAATATGAAGGGGAGGGCAGTTTGGTTTCCGACAAGTTTA CTGCAAACACTTTATCTTTGCTACCGTAATTTGTCGATTACTTGAAGAGA CCGTTTTTAAACAATAAAGTTAATTTTCTAAATCCCATATCTAATCGGGG AACATGCTCAGAGTATTGGTACAGCATTACTGCACAGTTTGATATTATGT TAATGTTGTTCAACATGCAGAGTAAGAACTCGGGACCTCCGCGGAAGAAA GCTAAGACAGACGATGGCGGAGGCGACAGTGGCACCAGAACAGGTCAGCA GCTTCTTCTCTTGGTTCATCTATCTATACTCTGGTGAAAGTGTTATGACT AAAAGTTATTATACCAATAAGCCCACTCGGAATTTCGAGTACGCATGTGC GGTGTCAAAGGTGAAGACCCTGAGACGTAAACAAAACCCGTATGGGCAGT GGTATGCAAATCGAGACAATGGTTAAGATGAGAACTGTTTACAAGCCAGG GACCTTCACCTTTGACACTGCACATGCGTACTTGAAATTCCAAGTGGGCT TATACTGTGTATGCATTATGTTTTCTTATGATTTATGAATCATTATCAAC ATCCACCCCTTAGCTGCACTTCATGAAGATCTAAAGGCCAAGTTCAAAGT TGACCTGCCGGACGACTTCTACCAGCTCTGGGACTTCTGCAAGACTCTTG ATGCTGAAAATCCTGCAGGTCGGTAGTTTTGAAAATGTTGAAAATGAAAA TGTAAGCCTACTGTGTAACTGTATTTCATGACAATGGCTTTCACCAATAT AATTGTCAACTTCCATTCTACAGTATAACTGTTAAGTGACATAATCATGA GAATTATGTTGGATATCAAGACTTTTTCCCATTGAATTCAATGATAAAGG CAGTTGTTTTACTAATGAACTAGTCAAGTATATGAACAGTAACATTGTTT TGGTTTGTTGTATTTTATTTGGATTTTGTAGTTACTAGCAGTTACCTCAT CAAATTTCTTGTAAATTTTCCTTTAAAGGAGCATTGGAGGATGCACTTGG CTTGGAGCTTGTTGGTCCTTATGATCTCCTTGCTGACAAGGTGGTTACAG AAGGCGCTCAGGATGCAGACTTCCTCCTTCACTGGAGATACTTCTACGAC CCACCTGAGTTCCTCACAGTCATTAAGGGAGATGACGAGACACAGCACCA TATTGGCTACTTCAGGTATGATGAGCATCTTATCACTAGTACTATAATAC ACAACATGTATGATATGCATGTGTAAGCATGTTTTGAAGTGGGATAGATA TCTTATCTGACAGTTTAAAAGCATGCATAAGTAGTGCTACACTGTAAGTA GCGTCATAATGAATAACCTTTCTATGCACTAAGTTTATTGTTTTTATTAC AGAGATGAACCGAACAAGAAACCAGTGTTTGTGGCGTCCAACCTCGTCCA GAAGAACCACACCATTTCTCCTCAGGGAGATAACCTGTTTGCAGCTGTCA AGTACGCATCTCCTACTTCCATCTTGTCTTGTTTTTTTGTTTGACCTTTT ATTCAAGCTCGAAATTGCTCTATTCGGCCATCGGGGCCCCCTTTCATAGA GTTCGAGTTTGCGAGAAGTGTCAAGGGGTCATTTGGAAACATAACAATGT CTTTATTCCTCTTACTGCTGATCAAAAACAAGATAGTGAAAAAGTACTGA AAGTTATTCACCTGTTATGTCAACCAGATGCATGTAACCTATGTAACTTC CATCTAATTCGTTTTATGTTGTAGATTACATCTCAACAAAGTCTTGAAAC AAACAAAGGACAAGAAGAAGAAAGAAGAGTTGAACAAACTGTCTGCCAAA CTGGAACAGCAGGCAAAGGAGGGAGGGTACTCACTCGAGGAACGGCCTGC ATCCTTTAAGGAAAGACGGAAGAAGGTAAGGAGTTTATTTTTACCAGACC TAATTTGATTAGTACAGTTATGAAAAGCCAGTATCTAGAATGTTTATTCA AAAGTTCAGAGTCAAGATTGTAACACTTTAAATTTTACTTTTACTTGTCC ATAAAAAACTGTAGTTTTAATCTATTAGTTAAAAAATAGATTGAATTGTT ACCTATATAGAAGACAACAAAGGCTTTAAGTTTTTGTTTTTCCATGTTCA CTATGTCTCAGATGGTGACCCCAACCTTCCATGGTGCAGGAATAGTGGTG CCCTTGGACAGTAATGAGGTGGGGTATAGGGAGTTGCCTGAGACTGATGG TAAGTATTGCATCTCTACTTTGCTTCCTTGTTCCGCCAGAACTAAGTGTC AGTTGAATTGTACTGGGAATACATTTACATGTACTTTCGCATTGTTTTTG TTTCTCGGTAACTGGTAAAATGAGGTTNTCGCATTGGTTTTGTCTCTCGG TAAGTGGTAAAATGAGGTTATTGCAGTGTTTTAAATTCCCAGTTAAGAAA ATTTTGTGGTACAGTCGTACCGGTAATGGGAAAAAAATACCTATTTGAAG TGTCATGATTTCATGGTACTGTATAAGGTCACCAAGAAAATTAAAGTTAC TACCTCAAACGTTTCTCAATTTACAGTATTTTGATGCATTTTTTGATGCC ATGAGAGGCACTGCCAAGCCAGGACTACACAGAGTAACTGGTAACTGACT GGTAAGTGACCATCTTCCGAGACAAAAAGAGCCGAAGAGATGCATTTTGA AGTGAAATATGCAGTGATATTAAACAAAATATATGTACTTTGCCTCAAAG TTTGAATTAACTTACGTCAGAGTTATCTTCGGTTATCATAGGTGATCTTA AGAAGATGCTGAAGAAAGTCGTTGAGGCGAAGGATGACGACGAGCGGATG ACACGTTTTGGAGACCTACAGGAAATCGTGACTCTAGTGCAGTTCGCAAA CGACGAGTGTGACTACGGGATGGGCTACGAGCTGGGGATAGACCTGTTCT GTTACGGGTCTCACTTCTTCCACAAGGCCATCAGGAACCTGCTACCTCTG GCGTATCAGCTGTTGGGGAGAGACGACTTCGGGACAGTCATCGAGGCACA TCTAGACGACAGACGAACAACAGACCTGGCTAGGCTCAGGCTGAAATAAC TATAAACGCACTGGCTTTTGTACATGTACTTACTGGATTTGATGTCCTTA GAGGCTAGTTTGTCGCACAATATCTGGACAGAAGAAAATATGTATTCTCC TTTGTTACAAATTTTTAACACTTTCACTAGACATGTACACCCATCATAAT CGCCTGTAGAGACACATATTCCTTAGGGTGACTGAACTATAAGACAGCAT CTTTTAAGATACAAGTACCTTAATACAGATGTAGTATTTACTTTTATGAA GATTAAGATGTGACTTCCTACTCAACTATGAATACTTAAGAAACTTGTCT GTTTTCAGTATGTAATTCTACTTAAACATTACTGGTAGCCTTCTTTCTGT ATCACCTTATTCTACAAAATTACGACAAAATATCTTTTGCCAGATTTTAT GGGAGAATGTAGTATTTGTGCTCAAATCAGGTCTCTCATAGTATGATATA AAAGTTAGATAGCATGATATGTATTCAGGAAATGGATAAATAAAGATTGA AGCAGTTTCCCGAAAATGTGTCTGGATGACATTTAATGTAGAAAAGATAG TATCATGACACAGGTCGTGGCAACACAGTTCAAATTGGCCCCAGAAATTG CAAAGTAACAAATTTTCTACAGACGTTTCTGTCTTTGTAACTAAGACACA TCATTTTGG

Coding sequence (CDS) from alignment at Sc0000037:1670630..1674638+

>Blg02906.0 ID=Blg02906.0|Name=Blg02906.0|organism=Branchiostoma lanceolatum|type=CDS|length=1026bp|location=Sequence derived from alignment at Sc0000037:1670630..1674638+ (Branchiostoma lanceolatum)
ATGGCGGACAAGAAGAGTAAGAACTCGGGACCTCCGCGGAAGAAAGCTAA
GACAGACGATGGCGGAGGCGACAGTGGCACCAGAACAGCTGCACTTCATG
AAGATCTAAAGGCCAAGTTCAAAGTTGACCTGCCGGACGACTTCTACCAG
CTCTGGGACTTCTGCAAGACTCTTGATGCTGAAAATCCTGCAGGAGCATT
GGAGGATGCACTTGGCTTGGAGCTTGTTGGTCCTTATGATCTCCTTGCTG
ACAAGGTGGTTACAGAAGGCGCTCAGGATGCAGACTTCCTCCTTCACTGG
AGATACTTCTACGACCCACCTGAGTTCCTCACAGTCATTAAGGGAGATGA
CGAGACACAGCACCATATTGGCTACTTCAGAGATGAACCGAACAAGAAAC
CAGTGTTTGTGGCGTCCAACCTCGTCCAGAAGAACCACACCATTTCTCCT
CAGGGAGATAACCTGTTTGCAGCTGTCAAATTACATCTCAACAAAGTCTT
GAAACAAACAAAGGACAAGAAGAAGAAAGAAGAGTTGAACAAACTGTCTG
CCAAACTGGAACAGCAGGCAAAGGAGGGAGGGTACTCACTCGAGGAACGG
CCTGCATCCTTTAAGGAAAGACGGAAGAAGATGGTGACCCCAACCTTCCA
TGGTGCAGGAATAGTGGTGCCCTTGGACAGTAATGAGGTGGGGTATAGGG
AGTTGCCTGAGACTGATGGTGATCTTAAGAAGATGCTGAAGAAAGTCGTT
GAGGCGAAGGATGACGACGAGCGGATGACACGTTTTGGAGACCTACAGGA
AATCGTGACTCTAGTGCAGTTCGCAAACGACGAGTGTGACTACGGGATGG
GCTACGAGCTGGGGATAGACCTGTTCTGTTACGGGTCTCACTTCTTCCAC
AAGGCCATCAGGAACCTGCTACCTCTGGCGTATCAGCTGTTGGGGAGAGA
CGACTTCGGGACAGTCATCGAGGCACATCTAGACGACAGACGAACAACAG
ACCTGGCTAGGCTCAGGCTGAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02906.0Blg02906.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02906.0-exon-Sc0000037-1570713199:1670630..1670725Blg02906.0-exon-Sc0000037-1570713199:1670630..1670725Branchiostoma lanceolatumexon
Blg02906.0-exon-Sc0000037-1570713199:1671100..1671172Blg02906.0-exon-Sc0000037-1570713199:1671100..1671172Branchiostoma lanceolatumexon
Blg02906.0-exon-Sc0000037-1570713199:1671493..1671597Blg02906.0-exon-Sc0000037-1570713199:1671493..1671597Branchiostoma lanceolatumexon
Blg02906.0-exon-Sc0000037-1570713199:1671908..1672094Blg02906.0-exon-Sc0000037-1570713199:1671908..1672094Branchiostoma lanceolatumexon
Blg02906.0-exon-Sc0000037-1570713199:1672282..1672380Blg02906.0-exon-Sc0000037-1570713199:1672282..1672380Branchiostoma lanceolatumexon
Blg02906.0-exon-Sc0000037-1570713199:1672654..1672804Blg02906.0-exon-Sc0000037-1570713199:1672654..1672804Branchiostoma lanceolatumexon
Blg02906.0-exon-Sc0000037-1570713199:1673041..1673128Blg02906.0-exon-Sc0000037-1570713199:1673041..1673128Branchiostoma lanceolatumexon
Blg02906.0-exon-Sc0000037-1570713199:1673671..1674638Blg02906.0-exon-Sc0000037-1570713199:1673671..1674638Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000037genomeSc0000037:1670630..1674638 +
Properties
Property NameValue
GeneIDBlg02906