|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at xfSc0000344:254..6247- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03120.1 ID=Blg03120.1|Name=Blg03120.1|organism=Branchiostoma lanceolatum|type=mRNA|length=5994bp|location=Sequence derived from alignment at xfSc0000344:254..6247- (Branchiostoma lanceolatum)
ATGATTATAACTAGCCTGGTACCCTTACTTTTTATTCTTTATTAAAAACT
TCAACAAGACAATACGTAGTGGAGCGCCCGGCAGACAAGCTGATGTTGCT
GACCACTCAACATTACAATTACACCAGCTGAATACAGCAATAAAACACTA
ATGGCAATTCATAGGGAATTTACCATTGCGTGCTGGGTTTGATAACTATT
CTTTGAGGATGTGTTTTCTTCCCACAGGCCTCCAGAGGGGATCTGGCTCG
CTTCAACGTGTGGGACCATGTCCTCTCACGGGAGGAAATGGACGAGTTCC
ACGGCTGCGGCAATGGCGGCAACGTCATCGACTGGGATACTGTAGCGGTG
ACGCCGCACATGGATGTGGCCTTCTCTGACCTCAACTGCAGTAAGTCAAA
TGGCGATTCCATACAAGCGTTGCTGCTTGCATATAGATATGCTACAAACA
ATAGCAATAGTAGAACTTGAACTTCTGCTTGACAGAATAGACCGTGTTTG
CCGAAGGATCCAAGAACGCAGTGTTTACTAGGTGTGGCCTACGTGTATAA
AAAGAACTACAATTGTGGGAACTAAAACCGCACCTTGTATCGGCAAGACC
TTACATGTAAACCCTACAGTCACTCCTGTACAATCTCATTGATCACAAAG
TCTAAGATTGGCCGTTGGGGCACCACAGAAGATCTGGCAATCAGTTTCTC
CCTTCTCCCCTTCAACCTTTCTCTGTTTTTTTGTTCTTCAGGTAGTGTCA
TGACGGTCCATTCTCTAAAATCATCGTCCCATCTTTTTGTTGCCTACATC
TCCTTCTTCCTGCCTGGACTGCTCCTTGCATGATAGTTTGCGTTAGTCCA
GGTGACCGTCACATGTGGCGGGACCACTTCAGGTTTCTTTTCTGTACTTT
ACTGTAGAATGTTAACTGCACAACATTGTCAGACATTGGGCATAGGGTTA
CTAATTTCACCGTCGGGAGACTATATATATATCCAATCCTTGTTATGCAG
GTACCGCAGACGTGCGACTGGAATGGGAGTTCTGGGCGTTAGGCGACTCC
GCAGGTAGGTTCCAGGGAGGTGATCTGGTCACAATGGAATACAACCTCAT
ACTGACGTCAAGCGCAGAACTGGTCAACATCACGTTCCAGTTCCATTCGG
ACGACTTCGAGGTAACATGATATCTACGTATATCTATAGGATACTGAGCA
AGACCCCTCGCGGGCCCATGGAGGGAGGTTTTACACTAGCATGGCCGGTG
GTGGTGCTTGTAACAAATATGGTGCATGAAAACAAAACTATCAAGAACAT
GACGTCCTTATATTTTCACTTTCAGGGCTTAGTTGACATTTACGACATAT
TTTGTATAGATACACGCTCTAGATCTTATCAAGCGGTCCAACAGAACAAC
AACGAGGCTAGGGTGGCAAACAGTTCTATTCGTGGCTCAAAATTGCGTCT
AGATCCAAGGCATCCACGAAACGGGTTCTGGCCACGCCATGACATATTAC
TACATGTATTGCCAGGACCTGGATTTCATGAAAACTCCTTATCTAGTCAA
TACGTCTATCGGCGTTGGACAATAATGTTTCAATAAAGTATCTTATGTAG
TGGTCGACAGAGCTCTGTAACTGAGCCGTTCCTTTTCTTGCAGGACATGG
ACCCCGTCACCATCTCCAACAGTTCGGGTCTCCTGGAGCTTAACGGCAAT
CTCATAGGAAAAGTCAAAGGTTTATTATTTTCTTTTGATTTCAAAATTTT
CATTACGCTTCAAACATTATACCTAATAATCTTACATTTTCTAGACATGA
ATCTGGGCTACCAACTTGCTACGTATCTCAATATTTTCTCTTGGGATTAA
AGGATATTCGACAACTGATAAAATGTAGTTTCCTGTTTTGCAAATGTCAG
GCTGACAGCAAGTATCAAATGTGAGATACCGACAAGCTGTTCCTTTCATC
AAATGTTCGATTGATTGAATTCTCTGCTCTACCTCTTCAGGCCCCGTGTT
CTACGGACAGAAACTCTTCGTACACATAAACGTGACCTACACTGTAAAAG
GATATGGACTTGAACAGTCTTTAGGACCTATCTGCCCTGACAATAACACT
TCAGCATTTGCTACAACCGACGCACTTCCTTCGTTCAACACGTCCTGGAT
GAACAAAGGGAACATAACGTTTGGTAATAAAATCAACGTAAGTAGGGAAT
TCACTACTATACTATACCCCATATATTGGCCCTTTGTTAATAGCACCTGG
TGGTATTGTGGGTAAGTTCTGTAGCTTGGATACTTGGATACGTTATTCAA
TCCATCAGCTAACGTCCATCTGTAGCCAGTCATACACGCTGCTACAACTA
TTTACAGACTAGCCGTAGTTTGAAGGCACTTGTTTCACTATTTCAGGTGT
ATTGAAATACTAGTATATTATGTTAACTTTACAAACTTTACAATAAAGGA
CCTGAACTGTATCTAACAGTACAACTAGGCATTTGCACACATGTCACAGG
TCAACATATTATGACAACTTATATCCTTCATCTTAGATGTCAATCACCGC
AGAGTTCCCCCGCATCAACTACGACAGCATGGTTGTTGAGGTGTATCTCC
CCACGATCGGTTCTATTCTCCCCCTGTCCATCACACACGTCACTCTCACT
GGGGTTGGCGAGAACATACTACTGTCTGGGTGGAACAACACCTCTCAGCA
AAGCGCTTTGCCTATCACAAAGGAGGTAAGTCCCTGTTGTATACACTGGT
TTCCGTTCTGCCAGTTCATTCTAGCGACGCTGAAGAAGAGTGATGGATGT
CACACGAAACGTTCGGAAGTAATCTCTGAATCTTGCCCAGTTGTAGGGAT
TGAGTTGTCTTTGGATATTGTTTACCTGCACGTCTAGCCTTCATAGACGT
TCTGTTGTTTTCGTTAGCTTTGTTCAACCAGCCAAGAGGCTTTCATAACA
TTGACCATTCTAATCCAAGATTAAATCAAAGCTACTATTGCCGTATCCCC
AAAGCTTTTTGATATTCCAAGCATTTTTCTTTGTGTTGAAAGTCTCAGTA
AAATGCAAGGTGCATACAGATATTGTTACTACATGTCTACTCGTTACCGT
TTCAAGATAAGTCGACAGGTGGCTCTTTTGTCATTTTACAGGACGATCGC
TGGACATTGGAACTGAAAGATATTTCTACGCTTGGGGCAAATGAAAACTT
TATCAAGCTCGCTATTGGATATGAATTTACAAAGGACGAAGAGTTATGGG
CCCCAAAAGAACTCTGGGCAAGGGTATGCTCTATTAGTCACGGTCTAACT
TTTGATTTTATGTATGCATGTATGTATGTATGTAACTTTTGATTTTAGAA
ACGAAATTGTGGAGAATATAGCCTGGCTGTACGTACCTGGAATAGGAAAT
GTGTAATGGTTATGACTCAGCATGGTCCTGTACACTTAACCGTTCACATC
TCTCCATAACTTTCTCTAAACTATTTCAAACAGCTATAAACTTGATAGAG
CACAAACCTTCATACAGTGTGACTTCACTCTACGAAAACGACCTAAGCCT
CTTGCTTATCTACCGGTACATGTAGGTGAGCGATCATACAGTTTCTACTT
GGCAATCTGAAAAGATCTCATGGGATTTACTTCCTCGCCTGTAGGTCGGC
GCTGACATCACGTTGGACAGGGCGATATGGACAGCCGCCCTCCCCGTTAC
TGTCGTACCGCGGGGCAAACCTGTCCTGGTCCTGGACGCCTCCGTCACCG
ACACGGGTAACCTCGGCAGGGGGTAGGGGCTTCACGTCTGGTTCACGTTT
GATATAAGCTTACTCGAATGCCATATCGAGTAAGCATATCGAAATATGAT
TAAACCAATTGTTGTAATGTTTATAACAACATCAATCTTTATTGACACAA
CAAAAGTACAACGACTTCTGTATTAAAGGTCTTCTATAGATTTACATACA
AACAAGCGGATAGAAGAAAATGAGAAGCCCGGTATACTAATATTTGGCAG
GGAAGCGATCAGAAGAGCGAACGGGAACTAGACCAGGCTAAAATAATGTT
AAGAGTGTACATCAATAGAATGTGACATTCATTCTAAACATGTTCTCTGT
TAAAAGCATCGCCGACGCTCAGGTAATCACAGTCCGGCGCCATATCTATT
GATACGTAACTGCTATCTGTATCTGTATAGCCGATATAACCGCCCTTCGG
TGTAACACACCAGCCAACACACTACACTAACAGCTAACAGAATACAGGTA
TCTATTTTCAAGCAATAAAACTATTATTTCCAGGGAAATGGTGACGTTCA
ACGTAGACCTTCGCCACGACCCCAACTCCACGGCGGCGGCGTACAACGTC
ACCATGAAGCTGATCTCAACCCCGTTCGTCAAGTACGTCAGTCTCGGCAC
ACTAACGGACGGACCAACGCCAACAGTCAGCGTCAAACCAAATAAGGTCT
CGTTCAAGGTAGGGTGATGATTGGGGATGGTCATGTGGTTGGTTCATCTG
GTAGCAGCCTCACAGTTCAGCTCCTGTTTTCAATTAGTTAGTAACTGGAA
GACACCGGTTTTATCCTGTGAAGTACATCTCGATTGGGGCTGCATCCGTC
TTTCGGATGGGACGTAAAATGGGGGTCCCGTGTTTGAGGAGGTGCCTCTA
GCACCCCCTCCCTAAATATATACCTACAAGGGTCAGAACAAGTGAGTGGA
TTGACTACTGTGTACTCACATGTCACCATGCCTCTTATGTGGTTTTATGT
ATTAATTTCCTACAGGATGAATAGCTGAAAAGTCAAGTCGATTGTGGATC
CAAATAAAGACAGATTTGATTCTGCTTAATATGTATACTATATATTACGT
TTTTGTTTCTAGTTAGTTTCATGTCAACAAAGACACCTTACGAATTGCTG
TGTCCAACGACATGCAGTGTGCAAGCATACACTTTCATCCTACATTACAT
AGTCCTTTGTAGTGTAGATCAATTACCAGAATTGTTGTACAGGTTGACAT
GTGTTGTATAAGATACAATTGTTGAGCAACAATGTTATATACATTTATCT
AATAAAACCCATTAAAGAATCCGGACGAAAGAAAACATTTACTCGTGCAA
ATGTTGTACTGTACTTTCCTAATCCTATGTACTCTTTAACGGTAGTTTAC
GCGTGTTTGTTTGTTTCTTGCCTTTACAGTGGCCTCAGATGGACATCGAC
GATCGACTCCAGTTCACGTTTAAGATGAGGATCGACCCGGACCATAAGGA
GCGGCCGGGAGACCACCGCTTTGTGGGGCCTCTGGAGACCCTGTACCGCG
GGACCGCCCTCCCGGGCAAGCGCCTGCGTACAGAGACAAAGCTGCTGCAA
TTCTTCTACAAGATCGTCGGTATGTAACTCAGTTCACTTTCCCTACATCT
GTGGTATCACGAATGTGAATATTTACTGTGCTCCGTGTATTCTTCTGGAA
AGATTTAGGAAAGTGGTAAAACTTGAAACAGAACCCTTTTGAACACTAAC
ATAGTGCCTTCCCCGTCACAAAGTTTGGAGAAAAAAAACAGCCACAGACA
TTGCAATTGAATACTGGCAGGTGTAACAGTGTCTTTATGTTCCCTTCATG
CCAGGATATTGTTTCTATTACCCTAGGAAATGCTTAACTTGTTTTCGTTG
CCTATGGAAATACTGTGGAGATGGGTAGACTTTATGCAAGGAAAGGGTAA
AAATAAAGGTGTCTTTTCATTTCTTTCAGAGAACCCAGAGAGACAGACCG
TACCAGGCAAGTGCATTTCTTTTCTTACGCAACATTAAGCAGTATTGAAT
CTGGTTGTGACTTAGTTTTATTCGCAAATCCGACATGTTGTAAAAATCAG
ATATTTACCTACAACGGTCGCTGATTGTACAATGCTGTCATCTCTGACCT
TGTCCGTGTTTCCGTTTTCCATTTCAGAATTCCGCGAAAAGAGTTTTCTG
GTCGATTCACAAAACAACAAGGTGTATTTTTGTAACTATGCCAG Coding sequence (CDS) from alignment at xfSc0000344:254..6247- >Blg03120.1 ID=Blg03120.1|Name=Blg03120.1|organism=Branchiostoma lanceolatum|type=CDS|length=1523bp|location=Sequence derived from alignment at xfSc0000344:254..6247- (Branchiostoma lanceolatum)
ATGATTATAACTAGCCTGGCCTCCAGAGGGGATCTGGCTCGCTTCAACGT
GTGGGACCATGTCCTCTCACGGGAGGAAATGGACGAGTTCCACGGCTGCG
GCAATGGCGGCAACGTCATCGACTGGGATACTGTAGCGGTGACGCCGCAC
ATGGATGTGGCCTTCTCTGACCTCAACTGCAGTACCGCAGACGTGCGACT
GGAATGGGAGTTCTGGGCGTTAGGCGACTCCGCAGGTAGGTTCCAGGGAG
GTGATCTGGTCACAATGGAATACAACCTCATACTGACGTCAAGCGCAGAA
CTGGTCAACATCACGTTCCAGTTCCATTCGGACGACTTCGAGGACATGGA
CCCCGTCACCATCTCCAACAGTTCGGGTCTCCTGGAGCTTAACGGCAATC
TCATAGGAAAAGTCAAAGGCCCCGTGTTCTACGGACAGAAACTCTTCGTA
CACATAAACGTGACCTACACTGTAAAAGGATATGGACTTGAACAGTCTTT
AGGACCTATCTGCCCTGACAATAACACTTCAGCATTTGCTACAACCGACG
CACTTCCTTCGTTCAACACGTCCTGGATGAACAAAGGGAACATAACGTTT
GGTAATAAAATCAACATGTCAATCACCGCAGAGTTCCCCCGCATCAACTA
CGACAGCATGGTTGTTGAGGTGTATCTCCCCACGATCGGTTCTATTCTCC
CCCTGTCCATCACACACGTCACTCTCACTGGGGTTGGCGAGAACATACTA
CTGTCTGGGTGGAACAACACCTCTCAGCAAAGCGCTTTGCCTATCACAAA
GGAGGACGATCGCTGGACATTGGAACTGAAAGATATTTCTACGCTTGGGG
CAAATGAAAACTTTATCAAGCTCGCTATTGGATATGAATTTACAAAGGAC
GAAGAGTTATGGGCCCCAAAAGAACTCTGGGCAAGGGTCGGCGCTGACAT
CACGTTGGACAGGGCGATATGGACAGCCGCCCTCCCCGTTACTGTCGTAC
CGCGGGGCAAACCTGTCCTGGTCCTGGACGCCTCCGTCACCGACACGGGT
AACCTCGGCAGGGGGGAAATGGTGACGTTCAACGTAGACCTTCGCCACGA
CCCCAACTCCACGGCGGCGGCGTACAACGTCACCATGAAGCTGATCTCAA
CCCCGTTCGTCAAGTACGTCAGTCTCGGCACACTAACGGACGGACCAACG
CCAACAGTCAGCGTCAAACCAAATAAGGTCTCGTTCAAGTGGCCTCAGAT
GGACATCGACGATCGACTCCAGTTCACGTTTAAGATGAGGATCGACCCGG
ACCATAAGGAGCGGCCGGGAGACCACCGCTTTGTGGGGCCTCTGGAGACC
CTGTACCGCGGGACCGCCCTCCCGGGCAAGCGCCTGCGTACAGAGACAAA
GCTGCTGCAATTCTTCTACAAGATCGTCGAGAACCCAGAGAGACAGACCG
TACCAGAATTCCGCGAAAAGAGTTTTCTGGTCGATTCACAAAACAACAAG
GTGTATTTTTGTAACTATGCCAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03120.1-exon-xfSc0000344-1570713199:6230..6247 | Blg03120.1-exon-xfSc0000344-1570713199:6230..6247 | Branchiostoma lanceolatum | exon |
| Blg03120.1-exon-xfSc0000344-1570713199:5858..6020 | Blg03120.1-exon-xfSc0000344-1570713199:5858..6020 | Branchiostoma lanceolatum | exon |
| Blg03120.1-exon-xfSc0000344-1570713199:5087..5247 | Blg03120.1-exon-xfSc0000344-1570713199:5087..5247 | Branchiostoma lanceolatum | exon |
| Blg03120.1-exon-xfSc0000344-1570713199:4529..4604 | Blg03120.1-exon-xfSc0000344-1570713199:4529..4604 | Branchiostoma lanceolatum | exon |
| Blg03120.1-exon-xfSc0000344-1570713199:4061..4257 | Blg03120.1-exon-xfSc0000344-1570713199:4061..4257 | Branchiostoma lanceolatum | exon |
| Blg03120.1-exon-xfSc0000344-1570713199:3523..3711 | Blg03120.1-exon-xfSc0000344-1570713199:3523..3711 | Branchiostoma lanceolatum | exon |
| Blg03120.1-exon-xfSc0000344-1570713199:2975..3106 | Blg03120.1-exon-xfSc0000344-1570713199:2975..3106 | Branchiostoma lanceolatum | exon |
| Blg03120.1-exon-xfSc0000344-1570713199:2476..2603 | Blg03120.1-exon-xfSc0000344-1570713199:2476..2603 | Branchiostoma lanceolatum | exon |
| Blg03120.1-exon-xfSc0000344-1570713199:1790..1964 | Blg03120.1-exon-xfSc0000344-1570713199:1790..1964 | Branchiostoma lanceolatum | exon |
| Blg03120.1-exon-xfSc0000344-1570713199:879..1068 | Blg03120.1-exon-xfSc0000344-1570713199:879..1068 | Branchiostoma lanceolatum | exon |
| Blg03120.1-exon-xfSc0000344-1570713199:492..518 | Blg03120.1-exon-xfSc0000344-1570713199:492..518 | Branchiostoma lanceolatum | exon |
| Blg03120.1-exon-xfSc0000344-1570713199:254..320 | Blg03120.1-exon-xfSc0000344-1570713199:254..320 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000344 | genome | xfSc0000344:254..6247 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03120 |
|
