Blg03176.0 (mRNA) - B. lanceolatum

Overview
NameBlg03176.0
Unique NameBlg03176.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000020:906033..907849+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03176.0 ID=Blg03176.0|Name=Blg03176.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1817bp|location=Sequence derived from alignment at Sc0000020:906033..907849+ (Branchiostoma lanceolatum)
ATGAGTGAGTGAACAGCTTTTCCATCAAATGATGGTTTTAATACATTTTC TTGCCTTGTGGTTTGGCAACAAATGTACAATTTACATGTATTAAACATTC TGATATAATGAAAAACACATGTCATATGTTAAAAACATGTTTATCTTAGC ATACCAAAAGCTTTTCTTTCATTTGACATTCAACCTTAGATATGAATCTA ATAGTGATATTGTAAGATTTATCCTAAAAGTCCACCCAGACCGGACTGCA TTACAGCGCTCTTGTCGGACGCCGGGGGCTTCTTCAGGTGGTCTTGAAGG TGGACCGGGTGGTCCAGGTGATCCGGGAGGCCTTGGTGGACCTGAAGGTG GACCGGGCGGGCCTGTCTGTCTTATCAAGGTGGCGGTGGAGGTGGCGGAG GGCCCCCGGGACCAGGCGGTGGAGGAGGGGCCCCTGGACCAGGCGGTGGA GGCGGGGCACCGGGACCAGGCGGTGGAGGCGGGGCACCGGGACCAGGCGG TGGAGGAGGGGCACCGGAACCGGGCGGTGGAGGCGGGGCACCGGGACCAG GCGGTGGAGGAGGAGCCCCTGGACCAGGTGGTGGAGGAGGAGCCCCTGGA CCAGGCGGCGGTGGAGGCGGGGCCCCTGGACCAGGCGGTGGAGGAGGGTC ACCGGGACCAGGCGGTGGAGGAGGGTCACCGGGACCAGGCGGTGGAGGCG GGGCACCTGGACCAGGTGGTGGAGGCGGGGCACCTGGACCAGGTGGTGGA GGCGGGGCACCAGGACCAGGCGGTGGAGGCGGGGCACCGGGACCAGGCGG TGGAGGAGGGGCCCCGGTATCGGGCTGTGGAGGAGCCCCGGAGTCACCCG AAGGCGGCCCCGGCGCTTCATCTTTCCCCTTCTTCGCGCCTTTCTTTCCT TTAGTCGATCCGTCTTTTCCCTTCTTGCCTTTCTTCTTCGTTCCTCCTTC CTCATCCGATTTGTCTGAGGTTTTACCTTTCTTCTTCTTCTTGTCTGCCC TTTCTTTGCCTTTCTTCCTGAAAAACAAACGGACCCCGTTTGTCGTCGTC GTCTATTACATGCATCATACACCACAAGTATCTAGCTAGTTTACACGTTC TTCTAGTCTTTTGAGAAGTAACGCATGACACCATATAGCTAACGCCAATT CGCCCTTTCTTATTCCATATGGTCTACAAGAAGATACAAGCCGCATACTC ACAGTTTTCTCTTGATCAGGAAAAGGTATGTCATCAATATGGAAAACAGG CCGAGCGGTGTGGCAGCGTTTTTCGTCTTCTTCTTGTCTGCATTTTCTTT GCCTTTCGTCTCTTTCTTCCTGAAAAAAAAAAACGGACCCCGTTTGTCGT CGTCTATTACACTTAACTTCATATATGCATCATGCACCACAATTATCTAG CTAGTTTACACGTTGTTCTATTCCTTTACACCCTCCTTTATCAGCGCTGA AACCCGGTCGGGAAATGTTCGGCAAACCCTCCCGGTCTCGGCCCTGATCT TTTGAACGGAGATTTTGGCTTCTGGGGACGTCACTGACAGCTGCTCATAA ATAATTAATGAGCTAGCCTTATTTGGCACAAACAGTCGTTAGTTGCTCAT GAATAATTAAGTAGCGATGTAAGACGTTAGCTGATTGGCTTCCCAGCGTC CTTTGCGGCTTTGCTCGAGATGAGCTTTAGCAAACCCTCTGATTGGCTGA AAGCTGTTTGGTGGTGACGTCGCCAGAAGCATGTTCAGGGGCTCGGAGGG GCAGGGCCGCTATGGGAGGTGACGAACATATCGGGTCTGCTGGGAGGACG TTCCTTTAAAAAGTAAC

Coding sequence (CDS) from alignment at Sc0000020:906033..907849+

>Blg03176.0 ID=Blg03176.0|Name=Blg03176.0|organism=Branchiostoma lanceolatum|type=CDS|length=669bp|location=Sequence derived from alignment at Sc0000020:906033..907849+ (Branchiostoma lanceolatum)
ATGAACCGGACTGCATTACAGCGCTCTTGTCGGACGCCGGGGGCTTCTTC
AGGTGGTCTTGAAGGTGGACCGGGTGGTCCAGGTGATCCGGGAGGCCTTG
GTGGACCTGAAGGTGGACCGGGCGGGCCTGTCTGTCTTATCAAGGTGGCG
GTGGAGGTGGCGGAGGGCCCCCGGGACCAGGCGGTGGAGGAGGGGCCCCT
GGACCAGGCGGTGGAGGCGGGGCACCGGGACCAGGCGGTGGAGGCGGGGC
ACCGGGACCAGGCGGTGGAGGAGGGGCACCGGAACCGGGCGGTGGAGGCG
GGGCACCGGGACCAGGCGGTGGAGGAGGAGCCCCTGGACCAGGTGGTGGA
GGAGGAGCCCCTGGACCAGGCGGCGGTGGAGGCGGGGCCCCTGGACCAGG
CGGTGGAGGAGGGTCACCGGGACCAGGCGGTGGAGGAGGGTCACCGGGAC
CAGGCGGTGGAGGCGGGGCACCTGGACCAGGTGGTGGAGGCGGGGCACCT
GGACCAGGTGGTGGAGGCGGGGCACCAGGACCAGGCGGTGGAGGCGGGGC
ACCGGGACCAGGCGGTGGAGGAGGGGCCCCGGTATCGGGCTGTGGAGGAG
CCCCGGAGTCACCCGAAGGCGGCCCCGGCGCTTCATCTTTCCCCTTCTTC
GCGCCTTTCTTTCCTTTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03176.0-exon-Sc0000020-1570713199:906033..906036Blg03176.0-exon-Sc0000020-1570713199:906033..906036Branchiostoma lanceolatumexon
Blg03176.0-exon-Sc0000020-1570713199:906272..907849Blg03176.0-exon-Sc0000020-1570713199:906272..907849Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03176.0Blg03176.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000020genomeSc0000020:906033..907849 +
Properties
Property NameValue
GeneIDBlg03176