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Sequence
The following sequences are available for this feature:
mRNA from alignment at xpSc0039671:235266..241415+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03446.4 ID=Blg03446.4|Name=Blg03446.4|organism=Branchiostoma lanceolatum|type=mRNA|length=6150bp|location=Sequence derived from alignment at xpSc0039671:235266..241415+ (Branchiostoma lanceolatum)
GTTCCACGTCACGGCGGGGAGGGAAGGTTGGTGTGTTTTATGTTGTCGTC
CGAAATTAGCGAAATAAAACGTTGTTTTACTGCATTTCCGATCGCCGAAC
CTTAGAGTAAGGCGTAAGGTGCTACAGATGCAGTGGTTTGAGCTGTAGTT
TGTAGAATTGTCTCAGGACGATGTTTGAAACAGATTTGTTTAGAAGTGTT
GATTTCATGTTCAACGTGTCAAGTTACACGTCGAAAACAAACTTTTGAAC
CATCTCATCAGATCTTGTCTTGTTCCGGTGTTGACTCTGATTATGGCCAT
ATTTTCATGCTGGGCGCATGGGAGATGAACTTAAAGTGTTGTGATCTACT
AGTACATGCATGTGTGTGTGTGTGGGGGGGGGGGTATGACCAAGTTCATG
AGTGCTTTGGGAGGGGTAAACCTAATTATCCTGATTTAGGGGAGGGGCAT
TTGTTAGAAATAGATACTAGTAACCGCCTTCTTCAACATTGGTCACATTT
CACAACTTGAGTGTTGTTGACATCAACATTACGGTGAAACAATTATAGCA
CCCAGATTTCCTCAATATCTTCATTTCCCTTTGTTCCAGAAGCCAACCTG
AACTCTAAGGAACATTGTCCCAGCTCCCCCAGCGATGTGACTCTCAATCT
CACACTAGTACTGGCCATACCTCACCTGTACCTGGAGTGGCCATGCAGCC
AGGACAGGACACACAGTTCAAAACTCATTACCACAAACTTTTATTATGGA
CAAATATGCAAATTATAAATCTTTTAACAGTCAGAAGTGCAATATATATC
CTATGAGTTGAAAGTATCTCCTATGAGTTTGAAGAATGCAGTTTGCCCAA
TGATACTGAGGAAAAATTGACAATCAAGTTTTTTAACACAGTCTAAAAAG
TCTTTAACGACCAAGAAACAAACCCTGCCGGCTTCACAATGAATTCCAAA
CTTCCCAAGAGTTTCCGGACTGTGATTCTGTGCTCGTTAGCGAACTTCGT
TAACCAGGCGGACCGTACCATCATGCCGATCGCGCTCGTGCCGATGAGCA
ACGAGTTTGACTGGAACCTGCAGGCTCAGGGCTGGATACTGAGCTCATTC
GCCTTCGGATACATCAGTAGTCAGGTAAGGGCCTCGGGGGAGCCTGGAGT
CAGGCTATAACACATAGACTGGTACCTACAGGTACATTAGGATACATACA
TGTAAGCAGTCAAGTAAGAAGTATGAAATGTAAGAAAGTTTCTTTTGGAC
ACAACATGTATGATCAAACAAAATGGTATAATTGTGATCATGAATTATTA
ATGTAAATGTTATAAGTCTGTATATATGGTACTGATTACTCTGACTTTGC
TGTGTGCTGCCCCCTGTAGGTTATCGGCGGAAGTGCAGCCCTGCTGGTCC
CTAACAGTAACGTTGTGTGTGCTGCCCCCTGTAGGTTATCGGCAGAAGTG
CAGCCCTGCTGGTCCCTAACAGTAACGTTGTGTGTGCTGCCCCCTGTAGG
TTATCGGCAGAAGTGCAGCCCTGCTGGTCCCTAACAGTAACGTTGTGTGT
GCTGCCCCCTGTAGGTTATCGGCAGAAGTGCAGCCCTGCTGGTCCCTAAC
AGTAACGTTGTGTGTGCTGCCCCCTGTAGGTTATCGGCAGAAGTGCAGCC
CTGCTGGTCCCTAACAGTAACGTTGTGTGTGCTGCCCCCTGTAGGTTATC
GGCAGAAGTGCAGCCCTGCTGGTCCCTAACAGTAACGTTGTGTGTGCTGC
CCCCTGTAGGTTATCGGCAGAAGTGCAGCCCTGCTGGTCCCTAACAGTAA
CGTTCTGTGTGCTGCCCCCTGTAGGTTATCGGCGGAAGTGCAGCCCGGCG
GTGGGGAGGGAAGTGGGTTCTGTCTGGTCCCTAACAGTAACAGTCTGTGT
GCTGCCCCCTGTAGGTTATCGGCGGAAGTGCAGCCCGGCGGTGGGGAGGC
AAGTGGGTTCTGGGATTCGCCGTCGCCGTGTGGTCCCTGGCGACCTTCTT
CACGCCGACCTTCGCGCGGACGCTCTACGGTCTGATCTTCGCCCGGATCT
GCCTGGGGTTCGCGGAGGGGCTCGGGCTGCCGACGATTTTCCACATCTTC
GCAAACACGGTTCCGATGGAGGAGCGGTCGCGGGCGTTCGGCTACCTGGT
GGCGTCCGGGTCTATCGGACAGACGCTCGCTTCTGTGGTGAGTTCTAGGT
TATGGGAGGCGTTTTACTATAGTTATATATGAGGGCCTGCATGGGGGGGT
CCCGACAACACTCTATGCTAAATTCGGAGGGCCGGCTACGTAATACGCTA
AACTCAGAAAGCCTCCCTACGCTCTACGCTAAATTATGGAGTGGTCGGCA
ACGCTCTACGTAAAATTAAAACGGCCGATTACGCTCTAAGTAAAAGGGGC
ATGCAGGCCCTCATATATTAGTGTTGAGGACAAGAGTAGGAGTGATAAGA
CAAAAACTGATATGTTTGTTCATGAAGTTGACAAATACAGGTTGGCTGGC
TGTATAACTTTACTAGTAGGTCTTTAGAATGTGACTTTTTAATGACAGCT
GGCAGCAGAAAAATCGATTTTATGGAATGAGCCTCAAATCTTGTGTTGTC
TGACTAACATCTCAGAATTAAATACTACTTTTATTCATGGTTTTTTCAAG
TACCAGAACTGAAATATAAAAGTACAGACGCTAAATAACCTTGAAGATGA
CAAGCTTTTGTAGTTTTTGACAGTTTGATGTTGTACTTGCGCCCTCTTGC
AGGTGTGCCCCAGACTGCAGTGGCCCATGATGTTCTACAGTTTCGGGGTT
CTGGGGTTCGTGTGGGTCGCCACATGGGTTCTCTGCTTCAGGGAGCAGTC
CATCGACTACGATGAAGAACTCTTCCTTCCGCCCAAGGTAAAAAACTTGC
TCCACTTTTCTTTCTTGTGTTTGTAAGAGCAATGGGGTCCTTGGTAAAAG
TCATAGCCAGGAACACAGACTTGTTCAGCTTTGGTCAACTTTGGTCCACA
GGATAACAAAGTGAAGCAAAGCTGAGTAAAAACTCTGAGGTAGGGAGAAT
CTTGGGCCACTCTAAGTTATACGTCAGTTCTTCATTTTTTTTTTCAACCA
AGATGGCAGTGTGTCGATGAAGGTTAGACATCCAAGATAAAAAACTTCTT
ACTCTACTTTTCTTGTGTGTGTTAGAGTGTTCGCCAGGTGCCCAGCCTTG
TTCAGCTTTGGTCCACAGGATAACAAAGTGAAGCAAAGCAGAGTAAAAAC
TACCTAGGTGGGGAGAATCTTGGGCCACTCCAAATCAATGCCTTGGTTCT
ACATTTGTTTTTGGCAACCAAGATGGTAACTTGTGTCGATGAAGGTTAGA
CATCCAGGTAATACGATATGCCAAATAACAGTTACTCAAGCAACTGGATA
TGATTTTGGATGTGATTTTCCAAAATCATATCCAGTTGCTTGAGTAACTG
TTATTTGGTGCAAGATGGTGGTGGTGGTGGGTGGCAAGGTAGGTTTGCGT
AAGTTAAGTGACCAAAAGTTCTTGTCCTTCCCTCACTCCCCCCAGACAGC
TGGAGCAGATACGGCGGATCCGCCCGTGCAGAAAACACCCAAGAAAAAGG
TGCTTAGCAACCGACCAATCAGGACTCTGAGGTGTCGAATCATATGATTG
GTGGAGGGGCTAATTTTTCTGCTTGGGGGTGTTATGTGCTTTTACCTTTT
CCTTCCTGGTTTGGTTTTCTGTTGATAGAACAGGTGCAGGTGGTGCATGG
TGTGAGGCAAAAGGTTTGTGGGAAATGTAATGAAAGGGTGATTTCTTTTA
ACCTTCTCCCTGCTGAAGTTCCCGTTCGGAACAAATTTTGTATTGGTTAC
AGGGTAAGGTAGCAGGGAGGAGGTTAAAAAGTTAACCCTGTTTGTTGTGC
CCTTCCTACATAGATCCTGACCTCTAACCTCTGTGCCTCCTGCAGATCCT
GACCTCTAGCTTCTGGTCCTTCTGTGGATTCTGAACTCTAACCTCTGTAC
CTTCTGCAGATCCTGACCTCTAACCTCTGTGCCCCTGCAGATCCTGACCT
CTAACCTGCGGTGGGTGGAGTTCATCTCCCATTGGCCGCTGTGGGCGATC
TACTCGGCGCACTTCGCCATGAACTGGAGTAACTACGTGGTCCTGTCGTG
GCTCCCGACGTACCTGCAGCGCGCGCTCGGAGCCAACGCCAACGACATCA
GCTTCACCGCGTTTCCCTACATGATGAACTCGCTCGTCGGCGTGGGTAAG
TAGCTAACGACATCAGCTTCACCGCGTTTCCCTACATGATGAACTCTCTC
GTCGGCGTGGGTTAGTAGACTTGCCTTGCACTGTTGTTCTGCCTTCTGCG
TGTTGATACTTGATCAGTGACAGGCTTCAGTCTGAATAAACTTTATTAGT
TCATTGATCTGCAACTGGAACTTTGACATAACTGAAGTTGAATACACTCA
TTTATGCCTCAGGATGAAATTTGCATGGGTATTTTATGACCAAATCCTAT
CAATGTATCTGTCCCTAATGCAGCAGCTTGTACTAACTCTACATATAAAG
CAGGTGCATTGTGTCATGTGCTGGTATTACCCAGGCTAATTCTGGGTTCC
AGTATCTTCTTTCTAATAAAGGAATCTTTTATTTGGTTTTATCTGTTTTT
TTATGTAATCCGTACCTCCTTACCCCCAGGTGCGGGCCACATGTCGGACT
GGCTGGTGTCCCGTAAGAACTGGACGGTTCTGTCCGTGCGGCGGCTGATG
ACGAGTATCGGGTTACTGGGGCCGGCCGTGTTCATCCTGGCATTCAGCAC
AACCAACAACCTCATCGTGGCACTGCTGTGAGTTTTTTTTTCTCTTCTGA
ATAACCGAAACAACCAACACTTCATATGTAAAACCTCATCTGAATGAACC
ATGTGTAGGAAATGTAGGAGTTTTCAATGCATCTCAATTGATTCAGGCCA
TAACTATGTCATGTTTTTCCTGGTCCTCTGTACCACCATTTTGTTGACCT
TGACCTGTACCCTTTGCCCCCTACCCCAGGCTGGTGTCGGTGTCCATGGG
TCTGTGTGCGTGCAACTCCTCGGGTCACATGAGTAACCATGCCGACGTAG
CGCCCAACCACGCCGGGATCACCTTCGCTGTTTCCAACACCATGGTAGGT
CAACCCCCCCACACACTCACATACAAGCACGCACTCACACGCACACACAC
ACACACATACGCACTCACATGCACACACAACCATGCCGGGATCACCTTCG
CGGTCTCCAACACTATGGTAGGTCCAACACACATACACATACATACTCCC
AACCACGCTGGGAGCACCTTCGCGGTCTCAAACACTATGGTAGGTCAAAC
ACAAACACACATACCCATGTATGCATGCACCCACACCCAACCACGCCGGG
ATCACCTTCGCTGTCTCCAACACTATGGTAGGTCCAACACACATGCACAT
GAACATGCATGCATGCACGCACGCATACACCCACACCCACACCAGGATTG
CATTTGCTGTCTCAAACACTATGATACAACTGGGGTTCTTTTATCTTATG
ATCTTCAGCACAAACTGACTTATGTTCACAAAGCATACAAGATCAACATG
TATTTACACATACAACAAATAAAAGAAGAGTCATGTGCCAGTCTAACAGA
CGTTTCTTATTCCACACACACAGGCACATAAAGATTCTCAGTTCTGCAAT
ATTTTGAGGGCTAGTATTGCAGGCATCCCACACAGCCCTGTTAAGCCATG
CTTTGGCAACACAACACCATGTACAAGATCAATCCTTAACCCTGCTGTCC
CCCTCCCCCTTGTAGGCTAGTATCCCAGGCATCGCCCACGGGCCCGTCAC
AGCGACCCTGGTGACGGCCACAGGACACTGGTACCCGGTCTTCATGGTGG
CAGCTGGAGTCAACATGGTGGGGGCGATGGTCTATGCCTCACAGAGCTCC
GCTAGCCAGGTGCTCTAGCACATGTACACCTGCTGTACACACCTGTGTCA
CCTGCCAGGTGCTCTAGCACACCTGTAGCTCCTGGTTGGTCCATCGTACA
GGTGTACCAGGCAGGTACTCTGAAAACTGTCAATGTTCATCATGTACAGC
TGCTCACCTTTCCAGGTGCTTTCATGTAGCTGTAGATAACTTTAGGTTTT
Coding sequence (CDS) from alignment at xpSc0039671:235266..241415+ >Blg03446.4 ID=Blg03446.4|Name=Blg03446.4|organism=Branchiostoma lanceolatum|type=CDS|length=1215bp|location=Sequence derived from alignment at xpSc0039671:235266..241415+ (Branchiostoma lanceolatum)
ATGAATTCCAAACTTCCCAAGAGTTTCCGGACTGTGATTCTGTGCTCGTT
AGCGAACTTCGTTAACCAGGCGGACCGTACCATCATGCCGATCGCGCTCG
TGCCGATGAGCAACGAGTTTGACTGGAACCTGCAGGCTCAGGGCTGGATA
CTGAGCTCATTCGCCTTCGGATACATCAGTAGTCAGGTTATCGGCGGAAG
TGCAGCCCGGCGGTGGGGAGGCAAGTGGGTTCTGGGATTCGCCGTCGCCG
TGTGGTCCCTGGCGACCTTCTTCACGCCGACCTTCGCGCGGACGCTCTAC
GGTCTGATCTTCGCCCGGATCTGCCTGGGGTTCGCGGAGGGGCTCGGGCT
GCCGACGATTTTCCACATCTTCGCAAACACGGTTCCGATGGAGGAGCGGT
CGCGGGCGTTCGGCTACCTGGTGGCGTCCGGGTCTATCGGACAGACGCTC
GCTTCTGTGGTGTGCCCCAGACTGCAGTGGCCCATGATGTTCTACAGTTT
CGGGGTTCTGGGGTTCGTGTGGGTCGCCACATGGGTTCTCTGCTTCAGGG
AGCAGTCCATCGACTACGATGAAGAACTCTTCCTTCCGCCCAAGATCCTG
ACCTCTAACCTGCGGTGGGTGGAGTTCATCTCCCATTGGCCGCTGTGGGC
GATCTACTCGGCGCACTTCGCCATGAACTGGAGTAACTACGTGGTCCTGT
CGTGGCTCCCGACGTACCTGCAGCGCGCGCTCGGAGCCAACGCCAACGAC
ATCAGCTTCACCGCGTTTCCCTACATGATGAACTCGCTCGTCGGCGTGGG
TGCGGGCCACATGTCGGACTGGCTGGTGTCCCGTAAGAACTGGACGGTTC
TGTCCGTGCGGCGGCTGATGACGAGTATCGGGTTACTGGGGCCGGCCGTG
TTCATCCTGGCATTCAGCACAACCAACAACCTCATCGTGGCACTGCTGCT
GGTGTCGGTGTCCATGGGTCTGTGTGCGTGCAACTCCTCGGGTCACATGA
GTAACCATGCCGACGTAGCGCCCAACCACGCCGGGATCACCTTCGCTGTT
TCCAACACCATGGCTAGTATCCCAGGCATCGCCCACGGGCCCGTCACAGC
GACCCTGGTGACGGCCACAGGACACTGGTACCCGGTCTTCATGGTGGCAG
CTGGAGTCAACATGGTGGGGGCGATGGTCTATGCCTCACAGAGCTCCGCT
AGCCAGGTGCTCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03446.4-exon-xpSc0039671-1570713199:235266..235291 | Blg03446.4-exon-xpSc0039671-1570713199:235266..235291 | Branchiostoma lanceolatum | exon |
| Blg03446.4-exon-xpSc0039671-1570713199:235855..236389 | Blg03446.4-exon-xpSc0039671-1570713199:235855..236389 | Branchiostoma lanceolatum | exon |
| Blg03446.4-exon-xpSc0039671-1570713199:237180..237452 | Blg03446.4-exon-xpSc0039671-1570713199:237180..237452 | Branchiostoma lanceolatum | exon |
| Blg03446.4-exon-xpSc0039671-1570713199:238018..238152 | Blg03446.4-exon-xpSc0039671-1570713199:238018..238152 | Branchiostoma lanceolatum | exon |
| Blg03446.4-exon-xpSc0039671-1570713199:239306..239510 | Blg03446.4-exon-xpSc0039671-1570713199:239306..239510 | Branchiostoma lanceolatum | exon |
| Blg03446.4-exon-xpSc0039671-1570713199:239945..240092 | Blg03446.4-exon-xpSc0039671-1570713199:239945..240092 | Branchiostoma lanceolatum | exon |
| Blg03446.4-exon-xpSc0039671-1570713199:240295..240409 | Blg03446.4-exon-xpSc0039671-1570713199:240295..240409 | Branchiostoma lanceolatum | exon |
| Blg03446.4-exon-xpSc0039671-1570713199:241081..241415 | Blg03446.4-exon-xpSc0039671-1570713199:241081..241415 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039671 | genome | xpSc0039671:235266..241415 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03446 |
|
