|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000216:93408..100234+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03526.5 ID=Blg03526.5|Name=Blg03526.5|organism=Branchiostoma lanceolatum|type=mRNA|length=6827bp|location=Sequence derived from alignment at Sc0000216:93408..100234+ (Branchiostoma lanceolatum)
CTGTCCTGTGAAAATTCACATTCTGAAATTGTGCCTGACCCCGCCCCCAC
AGATCCTGAACTACTACCGCACGGGGAAGCTGCACTACCCGTCCGACGTG
TGCGGGCCGGTGTTTGAGGAGGAGCTGGCGTTCTGGGGCATCGACGAGCA
GCAGATCGAGCCGTGCTGCTGGATGAACTACCAGCAGCACCGGGACGCCC
GGGAGACCATCTCCGCCTTCGAGGAGTCCGAGAACGAGGACGACGAGATG
GGGATCAGCGCGGAGATAGCGCGGAGGTAAGCGTCAATCAATCATCGATT
AACCAATCAATCACAGGGATCTCCCTAAAGAATGGAACAGTGGCACTCCT
CCATCCTGTTCTAATCCCAGCTCCATCCTGTTGATTTTCAAAGTTAGGGT
ATTTTTTCCAGTTTTTACCCAGCAAAGCCTGTAATTTTGCTCTAAACTGG
AAATTTCAGATGTAAAGCTGAAGTTGCAGGAAATGACTTCCACTATGTCT
GAAAAAGGCAAAAGGCAACATCCGCTCTCCTTTTGAGAGGTGTGCACCCC
CCTCCAGACCTCCCCCCTCACAACACGTACCCTGCGCTTGGCACCTTACC
CCCATCCTGCTCTATATTTCTGGGGAGATCCCTGAATCAATCAATCAATC
AATCAATCAATCAATCAATCAATCAATCAACACTTGGACGTCCAGGAGAC
AGCAGAGATGTTATCTAGATATCAGGAGTAATTATCCACATCACCGCTAG
ATTTCAGCGTTAAATGGAAGGGCTCGTTCACACTTGTGCGTATATTGAAG
ATTTGCGTATTGACTTTTTTTTGGGGGTGGGGAGGTAAATTTTAAACTTT
ACCTAAACCAAAGAAATGTCAATACGGAACTCTTACGGACTTGAATATAG
GCTCAATTTGAACGGGCCTAAGAGTTAGACGATCACTGCACATGTTTACC
CCATCAAAACAGTACGATAAAAGCGTTGTTCTAGCACGGTCTCTGTGGAG
ATAAAGAAATAGAAGGCTGCAACATCAGATCTACTTCTTTCCGCTCCAGG
TTTGGAATTGAAGAATGCCTCGAAAGTGACAAGAAATCATTCTGGCAAAG
ATGGCAGCCAAAGGTCTGGAAGTTTTTGGAGGAGCCCTACTCGTCCATGT
ATGCAAGGGTAAGTCATTCTCTCTCATTTCTCAGCAGATCTCTACGGGGG
GGGGGGGTGCTGCATACCTAAACTCATGTTCATGTTCAGGTCAGGATTCA
AGTCCAGGGGTTCAGGACTGGACTTATAAATCCGGACCTGAACCCATGGC
AAATATAAAATAACATGTTGACATTAAGCTGACAAACACAAAAAATGCAT
GCAAAATCATAAACAGTCAGCAGTATTAAACACAAAAGCTCAATCATAAA
GCCAAAAAAACAGCAATGTTTTTCGTCTTTTTCCAGTCTCAATTTCACGA
TCTTTGGAAGGTTTTAGATGGTTTAGAACAAAAAGGAGAATGTAAGCGAG
AGATACTTTTGTGCAAGTCAGGACTTGGTTCCTGACGTTAAGGTTCTTTG
GACTTGGACCTAAATGTTTTTACAAGTCCAGTTTAGGTCTTAGAGTTTAG
GCACGCAGCACTGTATCCATGGGTCGATATGGCAGGACTGTATCCATGGG
TCGATCCGGTCAAACAACAGCCAGCCGGCCTCATGGACACTGTCCTGCCA
CCGTAGAGATCTATCCTCTACCAGGCCCGGCGGATGGCTGGGAAAATAGT
AAAAATTGGCCAAATAGAGTGAATAGTATGCTAAGGGAGTCGGCTACGGA
GAGAGGGTCCAATCTACCTGCAAGTGAAACCCTGGCAAATATTCTCCCTA
TAGCCGGCGTAGTTAGTCTGGTAGAGACTAGTAGAGATCTGCCTGGAGAT
TACATTCTATAACAAGGTATATTGCGGGAGCATCGAGCCAGCGGAACGAT
CTTGGTAGAGTGCGGGACAGAGACAGTGTTATGAATGATCTTGCATAATG
TGACTTGGCGGGTAATCCTCATGCGACACAGTTAGCTAACACTGTCCTTG
TCGTGTGGTTGTGACGTAAGCGAACAGACATGACGTTACTCTCTCCGGAG
TACATGTACAGTCACATCACTCTCCAAGTAGAGGTTGGTGGGAAAAATTG
TGACCTTTTTTTATCATATGCACCGTTTTCTGTCCGCTCTAACCTCCCGG
AACATATACATTATCTATAGCTAAAACGTTTTGTCTGTACGGCATGTTAA
ATCACTACTACCGTTACGAAAAACGGTATTTTACGCCACATTTAAAAATG
CGGAAATCTTATTGAAAATATATAGATTGGTTGAAATATTTCACCACCTT
CAATGACCTTTATTTTGAAAATTTCCCTTAGATGTATATGTTTTCGCGCT
GTGAGCGCGCTGGTGGGGAGAGCGAACGAAAAACGGTGCATACGATAAAA
AGGTCACAATCTTCCCCACCAACCTCTGTTTGGAGAGTACAGTCACATCA
CGACAGCCAGTTCTAGCTCATCGAAAGACCTGTCACATATAACCTTTGCA
CGTCTCATTGTACATGTATGCGTTGTACAATTTTTCTACAAAAGGGCGTG
TTTCTATAACTAGTTATGACGTCATCGAAAATTGCATAAGTTATTGTCTT
ACAAAGAGGAACTTAAAATATCTCAAAGACTGGGGTCCAAATATAAATGA
AATTATTGTTTGCAAGACAATCCAAAAGGCCACAGCCCCTGTCCTGTATC
AAATTAAAGGTATCTAAACGAAGACGGTCAATCAACATTGTGAATTGATG
TGTAAAAACTCGCCAACGTTCGTATTAGCTATCCCACCTTCTTCTATAGT
TGATTACAGGTAATCATTGTGGCGTAATGGATAGAACATTCGACTGTCAA
ACAAGAGAACCCGAGTTCGACTCGGGCTGCCCTCAGACATGTCTGGGCAT
GCGCCCCGACGTTGTGCCCTTGGGAAAGGCACTTAACACGACTTTCCTCA
CTTCAATCAGGTGTAAATGAGTAATCTAGAGTTAGGGACGTCCCTCGGAT
AGGACGTTAAATGGAAGTCCCGTGTTTGAGGAGAGCCACACCCCGCGCAC
GTAAAAGAACCCACGACACCTTTCGAAAAAGAGTAGGGGCATGCCCCGGT
GTGAGATAGTCCAAAACCTACAGTCCTATGACTGCACATAGGTTCGCCCT
TAGTAATAGCCTCCGGCTAGTTGGGCAACCCTGGTATGTACCCAATAAAT
AAATAAATTATTCCCGCTTGATCGAGGAAAACAGTGACAAATTTGATTCG
GGTCAGTAACCTATGGAATCATAAATCACGAGGCACGTGGCACGTCAAGA
TGATTGATATATATAAATATATATTTGTAATAATTTATTCACACGGGACG
GTACATCATTGTTATAACCTTTATATCNGGTATATCATTGTTATAACCTT
TATATCAAACACTCCGTTGGCTTGAATTAGCCTTAATCTCTAAGAGTCCA
TTCCAATTCACCGAGACGGTTGTTATTGTCATGATTTACAATTGTTTTCA
ATTCATTATAATTTTGCTACTAATCGATCAATGTTTGTACTAGGATACCA
ATTTCGGATAATGTACAAAATTCGAGAAGTAATTGAATAAGTCATTTATC
TACTTGTATTTAGATCTATCGTGAAAGGAAAATATTGCGATAGTCTGGAA
TACTACAAAGCTACTGCCTATTTACTTGATCAGGCTGAATGAACCATGAT
TAAAGCTTTTAATTGTCAGTGTCGCACGACCGGTAAACCACTTTGAGATA
CAACAGTTTCGTATGGCAAGCTGTGTACGACCAGACTGTAAGGTTTTAAC
CACTCAACCCGGGATAGACCCCTACTCTTATCGATGAGTGTGGTGGATTC
TTTAACGCCCTCCTCAACTCCTTCTGCCTGTTGGATACGGTCTTTGCCAA
CCCGTAGGTCTGCTTGGAGACTATCTTACCCAAGCTAGGTACTCATTTTC
AGCTTAGTGTCCATGGTCTTCCTTATCATTAGTTGCTGTAAGACAAAGAC
AATGTGGCATTGCACTTCAAGTCAGTAACTTATTTTCACAATGCCAGATA
CAAAGAACAAAATAAACTTGATAAATTTTAATACTGAATAATGATATAAA
ACAGTGCACCAACATCCTATCCCCTAGGTTATAGGGCCTGAAGAAGAACC
ATGGTCTGGAGAAGGTCTATGTGTTCCCCTAGAACTGTCGTAGAGTGGAA
CCCGTTGCCACTTAGTACTGTAAAAGCATCCTCACTAGATAGCTTTATAC
AACGCTTCCAGCTAGATGTGCAAAGGTTAGGTGTGACAGACCGTTCAGTG
CAATACAATATACTGCTACTGCGTCGCGTTCCTGTCAAGCTGGTGTGTTA
CTCCGAATGGAGGTTATGATAATAATAATAACCTTTATTGTATACTCATG
TCCTATCGGGCTAAGTACAGGCATACAGATACAAAGGCACATATAATGAC
ACCAACGGGACTTCTTACACTTAACTAAAACATTGGTTCTAAAACTACTC
AACGCCGTTTATATAGATCAAGGTACAGATGTGCACTCAGTCACACTCTA
AGACCTCGTCTTCTCTGTGTCCACAGGCGCTGGCCTTCACGTCGCTAGCC
TTTGTGATGATGGCCATCAGCATCTTCTGTCTGGAGACGCACTCCTACTT
CCTGACGGAGGTGAACCACACCGTCCAGACCGTCAGCGACTCGGGGAACG
CCACCGTCCGCCACAACACCATCCTCATCACCGCCAGACCGCTCGTATAC
CTAGAGATGTTCTGCTGCGCGTGGTTCACCCTAGAGTTCTTCTCCCGTCT
GGCGTTCTGCCCGGACAAACTCGCCTTCATCAAGTCCGCTCTGAACATTG
TCGACTTCCTCAGCTTCTTTCCGTTCTTCGTCGAACTGTCTTTGTCTTTC
ATGAGCACGCACGCGGCGGAGCACAGCATCCGCTTCCTGGGGATGGTGCG
GTTGGCTCGCATCTTCCGCATCTTCAAGCTGACGCGTCACTTCACGGGGC
TGAAGATCCTTGCGCACACCCTACGGGCCAGCGCACGGGAGCTTCTCCTG
CTCATGGTGTTCGTGTGCATCGGGGTGCTGGTGTATGGTAGCCTCATCTA
CTACGCCGAGCGCACCACGGCGCACGACAACAACAAGTTCACGTCCATCC
CGCAGTCCTTCTGGTGGGCCGTGGTCACCATGACGACGCTGGGGTACGGG
GACATGGTGCCGCGCACGTTCGCAGGGATGATCGTCGGCACGCTGTGCGC
CATCACCGGCGTGCTGGTTGTCGCCCTGCCCGTTCCCGTCATCGTCAGCA
ACTTCAATCTGTACTACTCGCACGCTCAAGCCATGATGAAGCTGCCGAAG
AAGCGCCACCGAGCGCTGTGTGGCGCCGCCGAGGCGCTCAAGAACCAGTC
GTCCGACGCGGGGGACTCCAACTTCTCCCGGTCGGAGCGGAATGACAGTG
ACAACACCAAGAACACCGGTACGTTTTGTCGGCATCGCTACTGTTATTCA
TAAAGTAGACTAGTTCTTCAGAATTGTCAGATATTGATTTTTTTTTATTG
GTCAGAAATTACCCGCAATGGCAGCCATTCTAGTGCTGAATCGATGCAGG
GTTTACAGGTTTCACATAATACACATCGGTGACATATCAGCAATAGTTCA
ACCGCCATGTATGTACAAGTTGCTATACATTGTACCTCTTATTCTTCTTC
AACGGCCGATAATACATGCGTTTATGGAATATTTTACATTGAGCTGAAGT
TTATATCCAAATATTCCTTTGACCCTTCGGCTCAATTTTCAAATAACGGA
CCTTCGCCATTGACAAATTACCCACAATGCATTGCGCTGCGCATGCGTAC
TTAGAAACACGAATCTCCTTATTCCATCGTCCCTAAATTTCCTTCTTGTT
GTTCCCTCTTTAGACGGCACCAATCAGACGGAAGTGACGTGCATTAATGA
ATTTCTGAACGGCGATTCCATCATCCTTCGCAACGGCTCTCTGGTGGGCA
AAAATCTGGACTGGGACCGCAGGAGGAGCATGCGCAGATCGGGCATCGCA
CCGGTCCCAAAGCTCGACGACTTGGTCAACGGGCTAGAAATATCGGGTAA
GTCGTTATAGTGTGTGTAAATGTGAGAATGTGTGTGTGTGTGTGTATGTG
TGTGTGTGTGTGAGTGCACGCACGCATGTGTGCAGGTGTGTATGTATGTA
GTCTTTGTCTGTGTATGTGTGTGTGTGTGTATGTGTGTGTGTGTGTATTT
ATGTATATGTATGTAGTCTGTGTGTGTATGTGTGTATTTGTATGTGTGTT
TGTATGTGTGTGTGTGTGTGTGTGTAGGTGTATTTGTAGGTGTGTTTGAG
TGAGTGAATGTGTGTGTGTGTGTGTGTGTGTATCTGTTTATGAGTGAGTG
AGTGAGTGAGTGTGTGTGTCTGAATGCATGTGTGCGTGTTTTTTCGTGTG
TGTGTGTGCCGTGTGTGCGTGTGCGTGCGTGTGTGTGTGTGAGTATATGT
GTGTATGTAAACTTGAGTGTGTGTAATTGTTTGTAGGAGTCCATAGGTGC
ATGCCACAATGTATTTGTGTTTGCTTGTACACGTGTATAAAATGTGTTTT
GATATCTCGTTTCAGGTCTTGGCGACGATGACCCCAAAACTGCCAGCCCA
CCGACGTCTCCCACCTCCCTCAGTCTACCGTGCAACAGCGTCCTCCCGGT
GTCGTTACCGGTACCGCAGCTTGCGGTGACCGAGATCGTGTGACGCCCTG
GTCACGAGCACAGGAATGACGCGGTTT Coding sequence (CDS) from alignment at Sc0000216:93408..100234+ >Blg03526.5 ID=Blg03526.5|Name=Blg03526.5|organism=Branchiostoma lanceolatum|type=CDS|length=1416bp|location=Sequence derived from alignment at Sc0000216:93408..100234+ (Branchiostoma lanceolatum)
ATGAACTACCAGCAGCACCGGGACGCCCGGGAGACCATCTCCGCCTTCGA
GGAGTCCGAGAACGAGGACGACGAGATGGGGATCAGCGCGGAGATAGCGC
GGAGGTTTGGAATTGAAGAATGCCTCGAAAGTGACAAGAAATCATTCTGG
CAAAGATGGCAGCCAAAGGTCTGGAAGTTTTTGGAGGAGCCCTACTCGTC
CATGTATGCAAGGGCGCTGGCCTTCACGTCGCTAGCCTTTGTGATGATGG
CCATCAGCATCTTCTGTCTGGAGACGCACTCCTACTTCCTGACGGAGGTG
AACCACACCGTCCAGACCGTCAGCGACTCGGGGAACGCCACCGTCCGCCA
CAACACCATCCTCATCACCGCCAGACCGCTCGTATACCTAGAGATGTTCT
GCTGCGCGTGGTTCACCCTAGAGTTCTTCTCCCGTCTGGCGTTCTGCCCG
GACAAACTCGCCTTCATCAAGTCCGCTCTGAACATTGTCGACTTCCTCAG
CTTCTTTCCGTTCTTCGTCGAACTGTCTTTGTCTTTCATGAGCACGCACG
CGGCGGAGCACAGCATCCGCTTCCTGGGGATGGTGCGGTTGGCTCGCATC
TTCCGCATCTTCAAGCTGACGCGTCACTTCACGGGGCTGAAGATCCTTGC
GCACACCCTACGGGCCAGCGCACGGGAGCTTCTCCTGCTCATGGTGTTCG
TGTGCATCGGGGTGCTGGTGTATGGTAGCCTCATCTACTACGCCGAGCGC
ACCACGGCGCACGACAACAACAAGTTCACGTCCATCCCGCAGTCCTTCTG
GTGGGCCGTGGTCACCATGACGACGCTGGGGTACGGGGACATGGTGCCGC
GCACGTTCGCAGGGATGATCGTCGGCACGCTGTGCGCCATCACCGGCGTG
CTGGTTGTCGCCCTGCCCGTTCCCGTCATCGTCAGCAACTTCAATCTGTA
CTACTCGCACGCTCAAGCCATGATGAAGCTGCCGAAGAAGCGCCACCGAG
CGCTGTGTGGCGCCGCCGAGGCGCTCAAGAACCAGTCGTCCGACGCGGGG
GACTCCAACTTCTCCCGGTCGGAGCGGAATGACAGTGACAACACCAAGAA
CACCGACGGCACCAATCAGACGGAAGTGACGTGCATTAATGAATTTCTGA
ACGGCGATTCCATCATCCTTCGCAACGGCTCTCTGGTGGGCAAAAATCTG
GACTGGGACCGCAGGAGGAGCATGCGCAGATCGGGCATCGCACCGGTCCC
AAAGCTCGACGACTTGGTCAACGGGCTAGAAATATCGGGTCTTGGCGACG
ATGACCCCAAAACTGCCAGCCCACCGACGTCTCCCACCTCCCTCAGTCTA
CCGTGCAACAGCGTCCTCCCGGTGTCGTTACCGGTACCGCAGCTTGCGGT
GACCGAGATCGTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03526.5-exon-Sc0000216-1570713199:93408..93683 | Blg03526.5-exon-Sc0000216-1570713199:93408..93683 | Branchiostoma lanceolatum | exon |
| Blg03526.5-exon-Sc0000216-1570713199:94457..94565 | Blg03526.5-exon-Sc0000216-1570713199:94457..94565 | Branchiostoma lanceolatum | exon |
| Blg03526.5-exon-Sc0000216-1570713199:98034..98925 | Blg03526.5-exon-Sc0000216-1570713199:98034..98925 | Branchiostoma lanceolatum | exon |
| Blg03526.5-exon-Sc0000216-1570713199:99371..99553 | Blg03526.5-exon-Sc0000216-1570713199:99371..99553 | Branchiostoma lanceolatum | exon |
| Blg03526.5-exon-Sc0000216-1570713199:100073..100234 | Blg03526.5-exon-Sc0000216-1570713199:100073..100234 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000216 | genome | Sc0000216:93408..100234 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03526 |
|
