|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000216:13650..19913+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03533.4 ID=Blg03533.4|Name=Blg03533.4|organism=Branchiostoma lanceolatum|type=mRNA|length=6264bp|location=Sequence derived from alignment at Sc0000216:13650..19913+ (Branchiostoma lanceolatum)
GTAAAGGGGAAGCATTGTGTCAACATACATGTAGCATAATACTGACACGT
CTTCTTTCACTTTCGCAAATACGTCGTAATTACCATATTTTCCCATTATA
AACCATCATATAGCAAACAACCAGGCAAATTATTACTGGAAATTCGTCAC
CGTTAGATTATAAATGGTTTGAACTATCCTTTTGTTTTGGTGTGTTTGAT
TTTGAGTGAGAACCATTTAGATACGAATTCCCCAAATCTGTAATACATAT
GCATGTATGTGTCCAGTTTGATATTTGGACTCTCGCTGTACAGAAAGGAG
GGAGGGCTGCACATGTGGAACACGAAAGTGATATTGGTTATCTTCACCGG
TATAATTTGTTTGCTTATTTTATCGGTGTTTCTCATGTTTTTATACTGCC
ATGTTTCTAAAATGTACGTTGTGTAGTTCTTCTCTATGCTAAATCAAATT
GATTAGACAATCACTGTCAGACCGTGTTGTTTATAGGACGTAATTCTTTC
ATTTTTGATCAATTTCTGTTTTTAAAGCTATTGTCACATTTCTAAACCGG
GGCCTTCCCGGGATGTTTGCTGAAACGAAAAATTGTGGATATCAAAATAT
ATACGCAAATTAGCCTCATGAGTATTCTCTTTTGCGTTTTGTGTGTTTTG
TAGTCTTCTATATCATAATTTTGGTAGCAGAGTCTTTCCTTTGCCTGTTT
TTTTTTGGGTACAGGGTTCTGAAACTGGGATTAGAGTAAACCTCTTGGTG
TATGTAGTTACCAATATCAACCGAGGTTACCACTACACTTACAATTTTTC
CAGATATTCTTAGAGTGTATATTAATAAAAAATCTCCTAAATGATTTTTC
AATAGGACCAACGTACGCCTCCCAGCGAAGCCTGGATGATTGTAGAGTTT
CCAGACAAACCCCGAAATGTCCACATCCCCAGACACAGCTACCAAACAGC
CATAAACATACCCGTCAGCCGCCACCCACCGTCCGGCCTACAACAGCAGT
TCTCTGTGCGCGAAGGCGACGTCTGGATCCATGTGTACGACCTGTTCGTA
CGGGCAAGCGATGACCACGGTCTTCTGTTCATGCAGTAAGTACAGCAATC
TATTCATAAAATTTTAATCATATCAAATTACAGCAGTTTGATGCATTTTA
TGCTATATTAGGGGAATGTGCGCATGTACCAATGAAATTGTCTTCGGTTG
ATATTTCACGGTTCTAGATCCCAAAGTAAATGCTTTAAAATAGCTGTTGT
TGAGTAGGATATCAAGCGCTTTCGATTATCTTTAAAAGTTCATATACGTA
TACGTACCCCCAATAAAACCTTTACCCGATGCATCGGTAACGATATGGAT
ATAAGGATCTGTGCTCTGGCGCTGTGCTCTCAAAGTACAATCACAAAAAC
TTCAATTGCATAAACTAAAAAGGATCTCCATTCTTGTGTACAATATTAGA
TTTTTAACCCCGTGAAAACCGAGGTATTGTTTTCGGTCTGTTTATTTGTT
TACCGGTAATTGTTTTTGGGTGTGCTTATGTTTGTTCCCGTTGGCCCGGG
TCCAAGTTTGTTTCCGGGCAAAGTTGTGACCCTAGACAGGCAGGATGCAA
AGGTTGAACTGGCATGCGTCCAAATTTCTTGGGCAGGCAGGCGGGAAGTG
AGCGTTGACACGTGGCTAAAAATCTAGAACCCGAGCATGTAATGTGTGAA
ATGGACATGGTTGTGTTAAGAAATGTTAGTTACAGGTATGTTTTGACAAA
CCAAATCACTCAGTTTACAACAACATTACAGCTTTAGCGAAGAAACAAGG
TTCAAGATCATGGAAACGATGGTCAAAATGTTCGTGCCCGACAACTCTCT
TCAAGAAGACTCCCTTCCTGATAACGTGTTGGTACCGATGCAGCCATAGT
AAGTTTTCTGTACAAAAGATCCCTTATACACAGCATAAAACTCTCTTAGA
AATATATTTTTGATGCAGCCTTATATCCTTGTTCGCCATAAGATATACAA
GGCATACAGTAAAAATTCCTGTGGCACTACCATTTATGTTTAAAATTTCT
AAGTAAAGCCTGATCGGCAATGGGCTAGTAACATCCTGAATATTGATGAT
AGGTGTTACTAGTATTGTTTTGTGCACATTTGTTTGAACCTTTGCTTATT
CATGATAAGCTCAAATCGGCACGCAGTCCGCTTTTCATTGAGGTCATGAG
GGGAGAGGTAAGGGTCAGATAAAATATAACAGAGATACACAGTCATTTGA
GTCCTGATAACTCTATCAACACATATCATTTCATATTTATGGTACAACAA
TATACAATTGCTACAGCATACAACATACAGTAGGGCACATCAGAGTAAAC
TCAATTTTTTATAATTATTAGTATGGACAAGGAGTCTGGAGAGAAGGTCA
CAGTGATCACAACGCCGCTGTTCAACAGCGCGGGCGGACTACAGAAGGTG
TTGGTCGCACCGATGGACGTCGATGGATGGGTGGACATACCGAGAACAAG
AGCGTGCCTCAAGGTATAGTACGCATCCGTTTATCTCTGGAGTTGGTGAT
GGCTACCTAATCCGTCAAATAAAAGAACACGTCATCACTTTTTGATTGTA
TGTCCGAAATATTTTGATATACGTAATTAACTATACTCAATACTATCGTC
GGATTTACCAGGATTTATCTCAATGGACTTGAATAGCAAACATGCGTAAT
GACATGTGACAACCCCTGCATGGTATGCATTGGAAAAGATATCAAAGAAT
GTATAGACGTTAGAAACTCCTCCAGTGATTGTAAAATCCCATTGTCATCT
CATACTACTACACCATATTGTATAAGATAGATTGGTTAGCCTTATAGAAT
GTTATCTTATAATGTACTAGTGGATGCCATACTTTGTACCTTGTACAATT
GTTGTGCAATAAAGTTATTATTATTATAAAGAATGTGATAAATGCACAGT
TTGTGTGTCATAGCCTAGTCTGTTTATTGAACATTTTCATAATTGTATTT
TCTCCAACAGAATCTTCTGACCCCGCTGAACGACCCAGAGGTGAAGAGTA
GAAGAGCTGTACTCGACATCCGTAGTTTCTTCCTGCAGGGGTTTTCACCC
ACAGCGGTCGTAAGTAAACACTACGTACGTACACAACTTTGTACATAGAT
TTGGTGGTTTATGTAAATTGTATTTTGTTATAGTGTACTTATAAAAAAGA
TTCACAATATGCACGTGATCATGATTTGCTATGTCTTCTGAATGAATACA
CAGGTGATGGCCATACCAGAAGTGCAGCAACAAAGGGATTCGCGTCCGCG
TGACTTACAGCATGAGGTATATGTGATAACTTGTATCCGATACTGATAAC
CATTCATAGTCAAGACTAAAACTTGAATTGTACCTGTTGTATGTCCAACA
AAACATCATTTGCAAGGTTTGTTAGCAACACTAGTTAGCACCACCGCTTT
ATGTGTCATTTGATGACGGATTCTTATCTACGTTACTCTGTCCAGAATAC
AAACCATGCGGACGACACAACGTTGGAACATGAAGGCCACTTGAGTCAGC
GAGGACAAACACAAGCAGCATCGGGCACAACAGGTGTGATTTTCTTTTTG
GGAGGGGGGGGGTGTTTCAGGATCACAAATCACGATGCAATTGTTGTGCA
ATAAACTTTGACCTGCGACTATCATAGACGTTACATGTAGCTGTGTTTGT
TGTTGCTACAGTAATTGTGCCCTCAGTCCATTGCAATTGTATAATCAGCT
TCTATCGGAAACAAAGGAAGAGGAATGGGGAGGCTGGAGGGGGGTATAAA
GACAGGAACAGACAGATAGCGTAAGACAGCTATAGAATAATAGACAGATA
ATTTGACACACCAAGACAGTGCATATTAGGAAGTTAAATCGTTATCCTAT
TTCCACAGGCACCAATGCAGTTCGCATGGAGGCCCGTGCTGATCAAACCT
TTCAGGTACATTTGCAGTTTTTGTTAATTATAATCTCGTTCTAGACAGAA
ATATAATTTCATACAGGAAATGACCCAAGCACAAAGACATAGTACTATAG
ATAGCATTAGTAGCCCCCCCCCCACCCTAATCTGCTAAAGTGCTCGTTGT
ATTATCAATGTATCATACACTTAATCATGTAAGCAAATCTTCTTGTTAAA
GCAAAATCAGGTTAATGAAAAAAAAGGATTTAACTTGAAACCCACCGAAA
ATGCAATTATTACATATGTGTAGAGTTACATCCTTTTCTCATAATGTTAT
GTATACCAACACAGATGAACTTTTTACTAAAAAAAATACCGTTCTTACTA
TGCTAGTACTGCCAGTAGAAAAGGCTATAAAAGTTTTTTATTTTTCCTAG
GGCATGATTCCTGCCCGCGTCATTTGGCATTTCAAGAAGACGAAGTCGAA
ATTCGGCACCCACCGAAGGATGTGCCCACTCTGCAGAGAGCACGCAAGCC
GACTGTTTCACGCCACGATCTGCAGGGATAGCGTCTGCCAGAGATGCATC
GACGTTGCCGGGATGGTAGCGTACCATATGGGACGCTGCGTCGACCCATC
GTGCCCACTTTTTATACACGTCTGTTCCAACGACATTGGCATTCCGCTTT
TCGTGCCTGGGCGTTTCGAACCGACGGTGGCTTTCATAAGTATCGTGCGT
TCGGTGCTCGCGCGAATACTTCGATTTGATGACTAGCCTCCCGATCCCAC
GCAGACCTTCTCGGGGCTTTTTTGGGGTCTGATTTGCGCTATTTTCTAAA
CAGTCGTGCATTCTGATAAGCCCAAACTTATTTGGTACGCCAACCAATAA
CGTGCGGCGTGGAGAACCTATACCAAGTTAGCCTGGTCCCAGTCTCTAGG
AGTCGGCTTAGGGGTGTTTTACCGGGCCAAGTCTGCTTATGATTGAGCCG
TGTCTGTCAGCCTTTCACTTAGCTGCTATATAGAATTTCGCAGCCTTTCC
TACTCTAGCTGCCATAGACAGTTTCGCCGCCGGCGAAGTAGTTCAATCCA
AGGCCGTAAACAACACCCCGAGCGGGCTAAGCTGTCTGGGCGGGCGGGCA
TCACTCCCAGCGCCGTAGAGATATCGGGGAGCCCCCGATGGTATGGTTTC
CAGGCTATGACCAAGTTAAATAGGCGAGCAATAAGAAAATAGCGCAAAAC
AAAACAAAAACGCCGACCGCACAAGAAAAGGTCTGTGCGAGAGACTGTTG
ATACCTAGGTGAGCCCTAGGTTTTTGCTGAGGCTCGAATATTCCTTTGGG
CTTTTCCATCTGGAATACTGGAATAGGGCGATGGTTAAACTACCTCAGTT
TCCAAAATGTTGTCATGTTAGGTACCCTACTATCGTAACTCTCTTCTGGC
ACAAAATCCCGTAACATGTGCCCGTCTGTCGAACAGTTGACACCCCGTTT
TCAGATGGAATCGTCCACTTTATCACTCTAGTGCAATGTCCGGTTGTGGG
GAAGAGTCCACACTGGCCAATATGATATGACAAATTTTGTTGTTTTCAAA
GTTAATATACGCTTTAGCAGTTTGTGCGCGTAACAACAAAATGTTTCTTA
TATAGAATTCAACAAGTCTAGTTTCGTTTACAACTTTGTATTCTTTTAGA
TATTGCCCTTTACAGATATGTAGTTTAAGCAAAATACTACTCTCTTAAAT
GAAATAATTTGATATGCAAAAAGATATGCAATATACAATAAGGACATTCT
TTGTAATACTATAGGTGATTAAACTTTTTCATAATAGGTTAAACAATCTT
TTGGCTAAATGTACACTTAAACAGCAAATGCTAATACATACAGAATCTTA
TATAGTTTTCTTTACAACTTTGTACCTTTATTTTTGGACCTTGGCCTATG
TAGATAGTGGAACATTTAGATTTATATCATATACAAGTAGATAGAATGTA
AGAACCAACATGCAGAAATGCAAGAAAGAATTGTATCGTAATTTTGCGCA
CGAAATTCTGATGTTTCTTATTCAGAAGAACATCCACTACAGTCTTCTCG
TGATTCTTTTGTTTATTAATAAAGGTAACACGCATGTTCTATTTTGATGA
CATCACAATGTACAAAGTAACACAAGTGCTATAATTGTCATCTCCAAGCA
TATGTTCTGGTGGCAAGACTGTAACTGCCAGCCAACTGTGTCCACGGAGG
GCTCATAAACATATTTTGGCCGATGGATACGATCTTGCAACCGGAATATT
TACTTGGAGAGTATAATAAAGACTTAGCCACAAATAAAGTCTAACATAAG
TTTCCTTCCCGGAA Coding sequence (CDS) from alignment at Sc0000216:13650..19913+ >Blg03533.4 ID=Blg03533.4|Name=Blg03533.4|organism=Branchiostoma lanceolatum|type=CDS|length=1092bp|location=Sequence derived from alignment at Sc0000216:13650..19913+ (Branchiostoma lanceolatum)
ATGATTGTAGAGTTTCCAGACAAACCCCGAAATGTCCACATCCCCAGACA
CAGCTACCAAACAGCCATAAACATACCCGTCAGCCGCCACCCACCGTCCG
GCCTACAACAGCAGTTCTCTGTGCGCGAAGGCGACGTCTGGATCCATGTG
TACGACCTGTTCGTACGGGCAAGCGATGACCACGGTCTTCTGTTCATGCA
CTTTAGCGAAGAAACAAGGTTCAAGATCATGGAAACGATGGTCAAAATGT
TCGTGCCCGACAACTCTCTTCAAGAAGACTCCCTTCCTGATAACGTGTTG
GTACCGATGCAGCCATATATGGACAAGGAGTCTGGAGAGAAGGTCACAGT
GATCACAACGCCGCTGTTCAACAGCGCGGGCGGACTACAGAAGGTGTTGG
TCGCACCGATGGACGTCGATGGATGGGTGGACATACCGAGAACAAGAGCG
TGCCTCAAGAATCTTCTGACCCCGCTGAACGACCCAGAGGTGAAGAGTAG
AAGAGCTGTACTCGACATCCGTAGTTTCTTCCTGCAGGGGTTTTCACCCA
CAGCGGTCGTGATGGCCATACCAGAAGTGCAGCAACAAAGGGATTCGCGT
CCGCGTGACTTACAGCATGAGAATACAAACCATGCGGACGACACAACGTT
GGAACATGAAGGCCACTTGAGTCAGCGAGGACAAACACAAGCAGCATCGG
GCACAACAGGCACCAATGCAGTTCGCATGGAGGCCCGTGCTGATCAAACC
TTTCAGGGCATGATTCCTGCCCGCGTCATTTGGCATTTCAAGAAGACGAA
GTCGAAATTCGGCACCCACCGAAGGATGTGCCCACTCTGCAGAGAGCACG
CAAGCCGACTGTTTCACGCCACGATCTGCAGGGATAGCGTCTGCCAGAGA
TGCATCGACGTTGCCGGGATGGTAGCGTACCATATGGGACGCTGCGTCGA
CCCATCGTGCCCACTTTTTATACACGTCTGTTCCAACGACATTGGCATTC
CGCTTTTCGTGCCTGGGCGTTTCGAACCGACGGTGGCTTTCATAAGTATC
GTGCGTTCGGTGCTCGCGCGAATACTTCGATTTGATGACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03533.4-exon-Sc0000216-1570713199:13650..14734 | Blg03533.4-exon-Sc0000216-1570713199:13650..14734 | Branchiostoma lanceolatum | exon |
| Blg03533.4-exon-Sc0000216-1570713199:15431..15547 | Blg03533.4-exon-Sc0000216-1570713199:15431..15547 | Branchiostoma lanceolatum | exon |
| Blg03533.4-exon-Sc0000216-1570713199:16021..16162 | Blg03533.4-exon-Sc0000216-1570713199:16021..16162 | Branchiostoma lanceolatum | exon |
| Blg03533.4-exon-Sc0000216-1570713199:16660..16758 | Blg03533.4-exon-Sc0000216-1570713199:16660..16758 | Branchiostoma lanceolatum | exon |
| Blg03533.4-exon-Sc0000216-1570713199:16903..16965 | Blg03533.4-exon-Sc0000216-1570713199:16903..16965 | Branchiostoma lanceolatum | exon |
| Blg03533.4-exon-Sc0000216-1570713199:17145..17232 | Blg03533.4-exon-Sc0000216-1570713199:17145..17232 | Branchiostoma lanceolatum | exon |
| Blg03533.4-exon-Sc0000216-1570713199:17558..17604 | Blg03533.4-exon-Sc0000216-1570713199:17558..17604 | Branchiostoma lanceolatum | exon |
| Blg03533.4-exon-Sc0000216-1570713199:18000..19913 | Blg03533.4-exon-Sc0000216-1570713199:18000..19913 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000216 | genome | Sc0000216:13650..19913 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03533 |
|
