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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL60706_cuf0 >transcript:BL60706_cuf0-protein ID=transcript:BL60706_cuf0-protein|Name=transcript:BL60706_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=294bp
LSRACDLFCLTISVKKTEVMGQGVAIPPSITLHGNPLLTVQKFTYLGSVA
TCNNSLDEDINVRIGRAAASFGKLSKRAWENQKLTRKTKVQIYKTCVLST
LLYGSETWTVYSRQEKRLNSFHLRCLRKILNIKWQDKITNQEVLQQADIP
SMYEILRKNRLRWLGHVSRMDDTRLPKRVLYGEISTGSRPRGRPKLRYKD
ICKSTLQDFSICKDNWEYIAADGCRWRAAVHSGMELYRAAREKRESEARH
RRKNRTEGINVSEVFHCTFCNRICRARIGLLSHERHCKARTPPE Run BLAST on NCBI mRNA from alignment at Sc0000042:657853..658815+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL60706_cuf0 ID=transcript:BL60706_cuf0|Name=transcript:BL60706_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=963bp|location=Sequence derived from alignment at Sc0000042:657853..658815+ (Branchiostoma lanceolatum)
CTTATCCCGGGCATGTGACCTGTTCTGTCTCACCATTAGTGTTAAGAAGA
CGGAGGTAATGGGACAAGGTGTTGCAATCCCACCTTCAATCACGTTGCAT
GGAAATCCTCTCCTAACAGTTCAGAAATTTACTTACCTGGGATCGGTTGC
GACATGTAACAACTCTTTGGACGAAGACATAAATGTGAGGATTGGCAGAG
CTGCTGCTTCCTTTGGGAAACTCAGCAAGAGAGCTTGGGAGAACCAGAAG
CTGACGAGAAAGACAAAAGTGCAGATCTACAAGACATGCGTACTGTCAAC
CTTGCTTTACGGCAGTGAAACATGGACAGTTTATTCACGGCAGGAAAAGA
GGCTGAACAGCTTCCACCTGCGCTGCTTACGTAAAATCCTGAACATAAAA
TGGCAAGACAAAATTACCAACCAAGAGGTGCTACAGCAAGCAGACATCCC
ATCTATGTACGAAATTTTACGGAAAAATAGACTGCGCTGGCTAGGTCATG
TCAGTCGGATGGACGACACAAGACTTCCAAAGAGAGTACTGTATGGTGAA
ATCTCTACTGGGAGCCGCCCCAGGGGAAGACCTAAGCTGAGGTACAAGGA
TATCTGCAAATCTACGCTCCAAGATTTCTCTATTTGCAAGGACAACTGGG
AATATATAGCAGCAGACGGATGTAGATGGAGAGCAGCAGTGCACAGCGGC
ATGGAGCTCTACAGGGCTGCCCGTGAGAAGAGAGAATCGGAAGCTAGACA
TAGAAGGAAAAACAGAACAGAGGGGATAAACGTCAGTGAAGTCTTTCACT
GCACTTTCTGCAACAGGATTTGCCGTGCCAGAATTGGTCTCCTAAGTCAC
GAGAGGCACTGCAAAGCTAGGACCCCCCCAGAGTGACCGTGACTGACTGC
TAAGCTGAGAAATGGACCGAAAGCTGTCGACCGCCTCTGAAGACGACAAG
AGCCAAAGACTTC Coding sequence (CDS) from alignment at Sc0000042:657853..658815+ >transcript:BL60706_cuf0 ID=transcript:BL60706_cuf0|Name=transcript:BL60706_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=885bp|location=Sequence derived from alignment at Sc0000042:657853..658815+ (Branchiostoma lanceolatum)
TTATCCCGGGCATGTGACCTGTTCTGTCTCACCATTAGTGTTAAGAAGAC
GGAGGTAATGGGACAAGGTGTTGCAATCCCACCTTCAATCACGTTGCATG
GAAATCCTCTCCTAACAGTTCAGAAATTTACTTACCTGGGATCGGTTGCG
ACATGTAACAACTCTTTGGACGAAGACATAAATGTGAGGATTGGCAGAGC
TGCTGCTTCCTTTGGGAAACTCAGCAAGAGAGCTTGGGAGAACCAGAAGC
TGACGAGAAAGACAAAAGTGCAGATCTACAAGACATGCGTACTGTCAACC
TTGCTTTACGGCAGTGAAACATGGACAGTTTATTCACGGCAGGAAAAGAG
GCTGAACAGCTTCCACCTGCGCTGCTTACGTAAAATCCTGAACATAAAAT
GGCAAGACAAAATTACCAACCAAGAGGTGCTACAGCAAGCAGACATCCCA
TCTATGTACGAAATTTTACGGAAAAATAGACTGCGCTGGCTAGGTCATGT
CAGTCGGATGGACGACACAAGACTTCCAAAGAGAGTACTGTATGGTGAAA
TCTCTACTGGGAGCCGCCCCAGGGGAAGACCTAAGCTGAGGTACAAGGAT
ATCTGCAAATCTACGCTCCAAGATTTCTCTATTTGCAAGGACAACTGGGA
ATATATAGCAGCAGACGGATGTAGATGGAGAGCAGCAGTGCACAGCGGCA
TGGAGCTCTACAGGGCTGCCCGTGAGAAGAGAGAATCGGAAGCTAGACAT
AGAAGGAAAAACAGAACAGAGGGGATAAACGTCAGTGAAGTCTTTCACTG
CACTTTCTGCAACAGGATTTGCCGTGCCAGAATTGGTCTCCTAAGTCACG
AGAGGCACTGCAAAGCTAGGACCCCCCCAGAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:657853..658815 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL60706_cuf0 |
| Biotype | protein_coding |
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