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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL61066_cuf2 >transcript:BL61066_cuf2-protein ID=transcript:BL61066_cuf2-protein|Name=transcript:BL61066_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=105bp
MNDSGASSAGGGSGGSASRTGAKCIPTCSIIVGIIFLIQGCTFTALGATR
GAPDNAYLIVGIIFLCLSVLFLVLGCCCCCGQGRDSAGESEQQVKPTKSR
GGVPV Run BLAST on NCBI mRNA from alignment at Sc0000272:264024..266417- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL61066_cuf2 ID=transcript:BL61066_cuf2|Name=transcript:BL61066_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2394bp|location=Sequence derived from alignment at Sc0000272:264024..266417- (Branchiostoma lanceolatum)
TTCCAGGGACAAGATTTTATCTTTTGGTCGCCTTTTTACTGTTTACGACA
TTTGCAATCGTTTAAGGGTCTTTGACATGTCTCCTATTTTGGACTTGAGA
ATCTTTTGCAGACTCAAGAATTACCGACAGGGGCATACACGTCGTATAGA
TGATTCCACATATATTCACAACCCCCCGACACGTAATCCTGAATGTACTC
GACCTTGCCTATGTAGGTGGGTCGCGGGTTGCGGAAATGACATCACAGCA
GCTGTGCTATTCATTTTGACACAGTTTTACTCCATGACACATGTTACCAT
CGAATCTTGGGCTATTTCCCTCCAGACTGTTTGCTGAGTTTGCCTCAGAC
GGCATCTTACCACCAAAGACGAGCGGAGTGGAGCTCTAGATATCCATGAA
TGACAGCGGAGCGTCCAGTGCTGGTGGCGGTAGCGGAGGGAGCGCTTCCC
GAACAGGGGCCAAATGCATTCCCACCTGTTCCATTATCGTTGGGATTATA
TTTTTGATACAAGGTTGCACCTTTACCGCTCTTGGGGCCACACGAGGAGC
TCCAGATAATGCTTATCTGATTGTTGGGATCATTTTTCTGTGTCTGTCAG
TGTTATTCCTAGTACTGGGGTGCTGTTGTTGTTGTGGACAGGGCAGAGAC
AGTGCCGGAGAAAGTGAACAACAGGTGAAACCAACCAAGTCAAGAGGTGG
TGTTCCTGTCTGAAGATGTCTTCAGTACAAGTACAGCGTGCGAAACCCCG
TTGCAGACTCCATGTAGTTTTCTGATAGCAGTTGGTTCCGATTGTTTTCC
AACGGTTCTTATTGTCGCAGTGTGTAAGCGCATATACACTGTATAAGGAA
CTTGGCAATCAAACAGAACCCGGTAGCGATTTAAAAAAAACCGTGCTAAT
ATTCAAACAAAACAGTTCCGGCTATGTCTAACCGGTATAGTGATTGTTCT
TGGAGATGTTGAGAGGTTATGAATAGGGCGGAGTCGGTTTAATCTGGATT
GCATTATCCTTTTTATAGACAATATACATCAGGGGAATTCTCAAATACCT
TTTCCAATCAGACCATCTGACGACAACACATGATCAGCTTCACTTCCGCC
AACAATTTGAGATCCTATGGATTAGTTGAGATCCTATGGATTAGTTGAGA
TCCTATGGATTAGTTGAGATCCTATGGATTAGTTGAGATCCTATAGATTA
GTTGAGATCCTATGGATTAGTTGAGATCCTATGGATTAGTTGAGATCATA
TGAATTCGATGGGCCGGGGTCGTGGCAATGACAGAGGCAGGGTCAACAGC
GGCTAACCGGACGGAATCGGCTTCCCACACGCGTCTGGTACATGGTGCGG
TGTTTGGACGTGGATTGGATTGGATTTAGTTGTCCAGAAGACGGCGCTAA
TGGTGAGAAAATATACGTGACAGCCTGGGATATTCTTCCGACCAAATGAA
ACAAACTGGAGTCATCGGATCCGACCGCACAGCTCGGGGTACTGGGACAT
GATGTCAGCATCAGTACATAACGCTCAGGAACAACATGCCGAGCCTGCGG
CTGCCGCAGGTGCAGCTTTCCTCCCGGTCATCCAGCTGCGACAGCGTCCT
TCATGATCTGACCATTCTCCAAGGTAAGGCTATTGTAGCAGTTAAGTCAC
GGGATTGTATCTGAATAAGTCAACAACGAAGAAAGAAAAAGATTAAGAAA
TCGATATGTAGGATGTATCAATAGTCTGATTATCATCAAGATGTGGTCCA
CTCTTGACATACGCATCTACCTACCTATTTTCGTTTATAAATACAGTATA
CATATCGCATATATGTGTTATCAGTTTTCGGCGTCGAGCTCACAACGCAA
CTGCATGTAAATGTTGTAGATGCTAAATTGAGAACAACACCCTGTTTACT
ATGATAGCGTCAGTGACAACTCCAGCCTGGCGACAGGGCACGGCATTACA
ACCCAGGGAGCACATCTGGAGCCGCCTTCCAAGACCACCTCCCCTGCCTT
CGCACAGTGAAGTCGTCAATAAAGAGTATCATTGTAAAGACATATGTTGA
TGACATGTATTTATCGTCATTGTCTGCACAACAGCAGCATTTCGTGTTCT
TGTAGTTAATGAATATTTTATAGAATTCTCAGAACATTTCATCTTTAACG
AGTATAAGTCAATCCACATCGGCGTTCTTCATGTGCTAACGTTACGTTAC
AAAGGAACTTCGAGAACACCATCATTATTGCCTTGAATGTGAATTGGAAA
AAAAGAATCAATATTTATGTTCTACATCGTTGTCAGTATCTTTAGATCGA
TTATCATCTTTATCATCTCGAGTAACATATTGTACTGCTCTGTTAATATC
GCTTCATTGATTTACAACAGTAAATAATTGTCTATGAACAGTTT Coding sequence (CDS) from alignment at Sc0000272:264024..266417- >transcript:BL61066_cuf2 ID=transcript:BL61066_cuf2|Name=transcript:BL61066_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=318bp|location=Sequence derived from alignment at Sc0000272:264024..266417- (Branchiostoma lanceolatum)
ATGAATGACAGCGGAGCGTCCAGTGCTGGTGGCGGTAGCGGAGGGAGCGC
TTCCCGAACAGGGGCCAAATGCATTCCCACCTGTTCCATTATCGTTGGGA
TTATATTTTTGATACAAGGTTGCACCTTTACCGCTCTTGGGGCCACACGA
GGAGCTCCAGATAATGCTTATCTGATTGTTGGGATCATTTTTCTGTGTCT
GTCAGTGTTATTCCTAGTACTGGGGTGCTGTTGTTGTTGTGGACAGGGCA
GAGACAGTGCCGGAGAAAGTGAACAACAGGTGAAACCAACCAAGTCAAGA
GGTGGTGTTCCTGTCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000272 | genome | Sc0000272:264024..266417 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL61066_cuf2 |
| Biotype | protein_coding |
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