transcript:BL61964_cuf1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL61964_cuf1
Unique Nametranscript:BL61964_cuf1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL61964_cuf1

>transcript:BL61964_cuf1-protein ID=transcript:BL61964_cuf1-protein|Name=transcript:BL61964_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=467bp
MDVFTVVGAIAALIAVCIAVFLFVSQPTSRSSPWPKIKQILAYTQNVVPK
KITKLYMSGCSLDDFIPVGEVTAVHDVARFFVHHGSKFSVYTIDWAQEVL
VLIRHVDGVDLKARPIFFVAQKRSATEVLCIPLEQLQAVATAVADKVANV
QKIFIFLTGRCGSTLMTRLVEATSVAQAVSEPQVFSDICMALHRLKQSSQ
RGQSLIPRSCPTVLSSKESTIAFLRNLCTVMNYNLLMSDPRCRDVIFYKL
RMDVILMADLIAGAFPSAKTIFMYRNGLEFTESLARLYFQRYVVYWAISS
VECLRLWNWSGDFPYSTRCFGDNPKYSTVRHRGTISFYLYTWWASVMQCA
IDLQKKQPGYFFHAVIDYSALVNNKEKTFRLLMKKLGLRWSPEDPGEDKD
KMKNALIKDSQAGTVLSAKQRSPGGRWAPDVSSRWTGPWEREYIGEVCRR
AGNDITGPGFLLPGTIL
Run BLAST on NCBI

mRNA from alignment at Sc0000554:56221..65830+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL61964_cuf1 ID=transcript:BL61964_cuf1|Name=transcript:BL61964_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=9610bp|location=Sequence derived from alignment at Sc0000554:56221..65830+ (Branchiostoma lanceolatum)
CAGAACGGCACACAGCGTTGCAAAGTTCAAGGGCTTTCCAGAAGTCAGTC AGGGAGCAAAATAGGACAGGTAAGGCTTCAAGTGTACTCTGTTCTACACA ATTATAGTTTGGTGTAAAGATTTGTCCTTTACTGTGTTGATTTGGGATTG CTAGAGGTTCATAATGTAGAAACTAGCGATGAAAAAGGCCAATGGTTTCA TGTTGTTTTTAGATTATCAGCAGATAAATCAGATTGCCTTTAAGGCACAG ATACTAGACTACAAAAAGCGATGCCGTTATGCCTATAAAGTTGTTAAAGA CATCAGTTTTGTTTTGGCAGTCGTCTTTTGGCAGTTTATACTTACACTTA CTAAGGAATGTAACAAAATGACTAAAGGAAGAATGCGTTTATAACTAGTA ATATTGAGCAACTTGACCAATCGGGTGCACATGATACACCAGTGTCCAAA GTCCAAGGCCAGTGCACTTGATATGTTGTTGCCAAGAATGGGCTTTGTAA GGTCGCCATTTCAGTCAGGGTTTTCCATCATTCAGTGTTTTTCGTTATCT ATGAACATTAATGAAGCGACATCAGAATAAATGTCTCCAGAGAGTGCGTC TCCAATCATGCGTATCACCAATGGTGGACAGAAAGGCTGATGTCTAAATA TCCAATATTTATCCATTGATTTCGATACATTCTAACGATAAAGGGAAGGT GTGGTGTTTATTTCAACTGATGAAATACATAGGACAACAGTGTGGCAACT AATTGCTATGCAGTAAAGGTAGCAAAAATTGTGTTGGTGTTATAGTAACC CTTTAGGGCTTAGGTTAAAGTTAAAGTTAGAATTAGGGTTCACGTTATGT CTAGTGGCCTTACTTAAATTGTTTTGGCTTAAATAAATTTTTCGCGGAAA ATTAAAAAAAAAATTTGACCCACCGTTGTGTAGCCTAGCTATCGAAACGG AAAAAAAAGACTTCTTCGTACGCAAACTTCACTTAAGCCAAAGATGTCAA CAAGGAACGCAACAGGACTTGATATATGCACGTAGGTGCCCCCCCCCCCC AAATCTTTACAAAACAATTGATAGAAAAACGAACTTATTGCACAACACTT GTACATGGTACAATGTATGGCAACAGCTATTAAATATAGTATAATATAGA GGTTTTACAACAAAACTTAACATCCTAATTACTACTACATTAAGGGCTAG CATAAGTATTTTATAAAATTATAGTGTTACAATCAAATTGTGATTTTTGT TTGTTCAGCAGCAACACGTACAAGCTTTGAGATTCAGGAGAAAGGCTATA GACAACAATGGATGTATTCACAGTGGTGGGAGCCATTGCAGCTCTAATTG CAGTTTGTATCGCTGTCTTCCTCTTCGTCTCTCAACCTACTTCACGATCT TCACCTTGGCCCAAGGTCTGTTGTTTTTTTATCAATGCTAGGAACGCTCT CAGTACCCTTTGCGCACATCAAATTTGATAAGACAGTCTAGAATATAACG GGGAGGTCCCTAACTTAAGGCACTTGGTGACTCATCGCATTCCACAGTTA GTTGCCGGAAAGTGGTCAGGTTTTGATGAATGAAATTTGGACACATCAAT CAAGAGAATATACTTGTCTAAGAAATGCATTAAAGTTGTTCATGAACCCG TCACGCTCTGCGTTACAACCGGTAAATGCTGCAAGACGTTTTCGTGAATG TCCCTTTTGATTTTGTGCTACACTTGACTAGTTTACCCTTAGTCTATGAA ACGCAAACTCCACTGTCCGAGGCTGTTGGGCGCCGCTATAAGCTTGATTC AATCAGGCTAGTGTGCCCTAAGTTTTTGGCGACGCCTCAGGGGCGAGCCA AATTTTTACTATATTGTGTGCAGATTGCAAGAATTCTAGGAATTGTACAG GAATGTGAAAGTCCATGGGACGATAACTCAAGAATGCCTGGATGTATTGT CTTCATATTTTGTAGGTGGGTAGGTCTGCGGGAGACCTTGTAATAATTGG ATTTTGGGCCCCCTAGCGACTTTTATGGTACTGCAGGGGAACTTTCACTT TTCAAATCTCGTCTTCTGAACATGCTATAGTCATGATTTTTAAGTGGTGG ATAGCTCTTTGTTAGGAAAATATGTCCTGTAGATTTGGACCCCCTAGCGG CTTTTTTTGGAACTGCAGGAGCTGATTTTGACTCAAACTTTGAAAGAGAA TAACGCAAGAAGGGGATGACGGATCATCATAATTTTTGGTGTGTAGATAG CTTAAGTGATGATTTACATAATCATATGCCAATTATGCAAATCAATATCT GATTTGCATAATTAATGAGGACAGTTAATAAATCAGCTGCATTGTAATGT AGGACTCTCAAACACAGGAAATATGTAACTGAGAAAGAGATAAATATCGA TAGATATCAATTATGCAAATTGATACTTAAATTGCATAATTAATGACAAA ATACTATAAATCCATAGTGGTAAATGATGGGGTTTTCATTTTTGCACCAC TTGGAAGTTAAGTAAATGTGGCCACTATTAGACACAAATTTTGCACAGAG GGCCTCATTTACATAATTTATGAGGAAATGGTACGATATCTTTTTTTGTG AAAACAAGATTTTCATACATTGGACAACTTGTGTTATTTTGGTAGAGAAG GTGATCGACTGATATGATTTATGCNAAAACAAGATTTTCATACATTGGAC AACTTGTGTTATTTTGGTAGAGAAGGTGATCGACTGGTATGATTTATGCG AGGTCCTTATTTGCATGTGGGCTAAAAACGAAAATGTTAACAGAGACCAC CGTCGCCATGGCAACATCTTTTTATGTTGCCAATCTTGTTGTACTTATTT TATTGGTCTCTTCAGAAGCTGGTGATAAGTTTAAGTAAACAAACACCCAG GAAACCAAATTTTTAGTATTTTCTTAAGGTTTAGTTCTTATAAATGTACA GTTGTTTGACTGATTGGTATGGGTCGTACATGTAGTTATACATTTCTGGG AACAAGACATTTAGTGATTATTCATAGTTACTGTTTGAAATTCTGTTTTT CTAAAAAACGATAAATAAAAATATACAAGTATATTTTGCATGCAAATTAC AACTAGAGTTCCACGAACACATTATCTTCGCCAAATAATCAAGGCTTATT GTGGAGAGTGATTGATATTTACATGCTTATCACCCCCTGCAAACTTGATC ATACACCATAATCTCCAAGCAGATCTATTGGTTGCATAGAGACCGTATCA AACTGGCAGAGGAAGTACGTTTTGCAACCCAAGCTCCTTCTTCCAGTTGG ATACGGTCTTTTCAATCCATTGGGTCTGGTTGGAGACTACATACACCATA CCGTTTGAAAGTTATGATAGGGGGGGGGGGGGAAGAATGAGTCCAGTCTA GATAGGGATAAAAATCATTTGGTGGTACAGGACTAGTATATGTGTATAGT GTGCTGATATATGTTATAACTGGTCATCAAAAAAATTGAAAGTCAACTTA CAATTAAATGGTACAGTCAATATATATGAATAGAATAAATCTTTATTCCA TATCATACACATTTTGCAAGACATAGTACATGTTACTTTTCCATACGGTG CTAGGTAATACCTAGCAGTGGTGCAGTTTTGGTGCAGTGTACTCTCTGAG CAGAAGAGTGGGTCCGGCTGGTTATTCACATGTTTTTAGGTGTTTTGTAA GGCTTTCTATTTTGTTCCCTTTCCGTTATGTCTCAACCCGTGTGTTGGAC AAAAATGCCGAAACTGAACACTTTAAAAACCAACCGGACCCACACATCTG CTTGAATTGTAGTGAGACTGCCCCATTTGTTTATTTATGTACCCCATCTG TTTATTTATGCTTAGGCTGCACCAAGTAATTTTTATGGATGACGTCCGCG CGCGCATTGATTTTGGTCTGTTCCCAGAAAAAAAAACAAGAACTTCCGCG TCCTGTAACTATGACCAAAGAGTTACGACAGTGCCGAAAATCGTAAAATT AACGTTAAACTCGTCACGCGAAATGCATAAATAAGGAAGTGGCTACTGAC AGGATGATCCTGTCAGCAGTAGAAAAAATTGAAAATATCTGCACTACTGA CAAGATGATCTTGTCAGCAGTGCATTTTTTTCTACTGATGACAGGATCGT CCTGTCAGTTGTGCTATTTTTTTCTACTGCTGACAGGATCATCCTGTCAG CAGTGCAGATTTTTCCTGTCAGCAGCGGAAATTTTTCTAAATTTGTGAGC ATAAAAGTGAAAAAGGGCGGCAACGTTGTTGTTGATATCGATTCGTACGC TCTCGATGTCGGTCAGGGAGAGCTGACGTTCGCGCAACTGTACGAGAGAC TTGTAGTGGCGAGTCAGTGAGTTTCGGCCGTACAATTTTAAGCAAGTCTT GAAAATATCAGCTACAGTGCATTTCTTCTGTAATGACGTGAAGATCGGGA GAGGCTTTGAAGTTTACTGCGGCCTGCAGGTGGGGCAGGCAACCAAGCAG TTCGGGTGTTTCATCCGCATGGAGGTCGACAAGACAGCTGCCACAGCTGA AGCTCCTAGGCCCAAGTCTGTTTTTGAGGTATGAAAAGTTCCGTTCTTAA TCTGTTTTGGATCAAGTACCATGTACGAGAAAATTATAATCTGGGAAGGG GGAGTGTAAGATGAATGTGTTCATGTATTCTGCATGGATAATAATCATTT ATTCGTTTCTGGTTATCTATACTTGTTGGGGAAATATGTGCTTTTTTGAA ATTTCTATCATTTTTGGTCCATATTTGGCTCTTGAATATTTGCTATTATT CATTAGGATTTCTAAAGCATAGGTAGAAATGTAGTAATGCATGCGAATTA ATCACCGACTAATTTTGCCTTTTTAATATACTATGTTTATGCAGGCCTGC AAAATCAATGGGATATGGAAAGAAACAGGACAGGACAACAACTGCTGTTC AACTTCAGCTGATTTATTCAAATTATTGCTGTTTTCATGATGAATAAAAG AATTGTTAGTTGTTACACTGTGTTCTCTCATTCAATTTGTGTCCTAACAT GTGTCGTCGACTATTATATTTCAAATCTAGGCATCTTGTTTTTTTCGGCC CTTCTTGTTTTTTTTTCGCGCTCTCGCATTAGATTTAGGGTCTCCAAAGG ACGTCATCCATAAAAATTACTTGGTGNTGGGTCCGGCTGGTTATTCACAT GTTTTTAGGTGTTTTGTAAGGCTTTCTATTTTGTTCCCTTTCCGTTATGT CTCAACCCGTGTGTTGGACAAAAATGCCGAAACTGAACACTTTAAAAACC AACCGGACCCACACATCTGCTTGAATTGTAGTGAGACTGCCCCATTTGTT TATTTATGTACCCCATCTGTTTATTTATGCTTATAGCTAGCAGCACCATC TGAGCTCTCTACATACAAAACTTCACGACAATCTCTTCACCCCTTCTCAA GTAATATGTGTCCGAATGTCAAAACAAAAACNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNATTATCGAACTTGACCTTCCTTTCCGTAAACCCTACCCATC CACTAAATATCATACAGATCCATCAACAGCTTCTTGAGTTATGTTGTCCA CAAGAAAATACACATCCACACAAAGCCCGCTGCAGTACCGACGGAAAATG CCAGGAAAACCATTTTTGAACTTGACCTCCGTTTCTACAACATCTACACA CCTTCAAAAAATCATGAAGATCCATCAACGTTTCCGTCACTTTTTTTGCC TACATACAAACACACGAAAATTAAAAATCCGCTACATTACTGTTGAAAAA CGCATGGTAAACCATTTTTGAACTTGACCTTCCTTTGCACAACCACTACA CACCTACCAAAAATCATAAAGATTCATCAAAGGTTTCTTGAGTTATGCTC TTGACATACATACAGACCCACCAAACAGCTGGCTCAACCGAAAACATAAT CTACCCCGAGTACTATAGTACTCGGCGAAGATAANNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNTACTGTTGAAAAACGCATGGTAAACCATTTTTGAACTTGA CCTTCCTTTGCACAACCACTACACACCTACCAAAAATCATAAAGATTCAT CAAAGGTTTCTTGAGTTATGCTCTTGACATACATACAGACCCACCAAACA GCTGGCTCAACCGAAAACATAATCTACCCCGAGTACTGTAGTACTCGGCG AAGATAACTATGTGCATGGACTATGTTTATTTACTTAGTTTCTAATAAGC AAAGTCGATGGCAACAAACAAAGAGTACTAGTCTTAATATATAAGATAAG CGAAAAATATGCCTTATGTTAGGGCACATCTTCAGTTAGGACCCTCCCTG TTAATCTTAACGACACAATTCTAGGACAATGCAAGGGCAATCACTATACA TTCCAAATTCTACAATTATATAGGTTTCCCGACTTCGCCTAGGTAGGAAG GGTAACTTCTGTTGAAATCATTATTTTCCAAGAAGCAGACCGATATCAAT GCGTAATCCATAGAATCAATACATAGAACTATATAAAATCATCATCATCA TAAATAAAATAAAATACATAAAATACATAATACACATTAAGCTGTTGCTG CATCATGTTTAAGCTATTTTGCATAGTCCAGTGCCAAGACAAGAGAACCA TGCATGAACTGAATATTTTTTCCTGTCTTCTCTACCCTGTAGATTAAGCA GATCCTGGCTTACACTCAAAATGTGGTGCCAAAGAAGATAACAAAACTTT ACATGAGCGGCTGCTCTCTTGATGACTTCATACCAGTTGGAGAAGTCACA GCAGTTCATGACGTGGCACGGTTCTTTGTCCATCATGGGAGCAAGTTTTC TGTTTACACTATCGACTGGGCACAAGAAGTCCTTGTGCTGATCCGACATG TAGACGGTGTGGATCTAAAAGCACGCCCCATCTTCTTTGTGGTAGGTGGC ATTTGATTTGCGGCATGCAGGCAGCATAGAAAGAGATACGATTCGATCCA ACTTAATGCAAATTAGGAATAAATGTGCATAATTGATGAGGAAATCGTAT AATGCGTGTTGTTATTTTCTACAAAAGTACTTCAAGACCTAGCTACATTT ATGGCAGGCTGCACATAGATACCTAACAAATATATAAATAACGGCTTGAT TTGATGGTTAATAAAAAAATTTAGTAAATTATACAATACCTGGCATTTCA TGCAGTTAACATATGTAAGTTAGTTAGGTGAACATCATCATGCACAGATT ATGTAAATGTGAAAGTCATTTGCATAAAATATGCAAAGCTCTTATTACAT GGAGGTATGAGGTCTCCAAACTGTTGATGACAAACTCTTATCTAAGGAGG TATTCTATAGCAAATCATAGAGCAAAGACAATATTATAATTCCATCTTTA AAGGCCCAGAAGCGAAGTGCAACCGAGGTTCTCTGCATTCCCTTGGAGCA GCTCCAAGCTGTAGCGACAGCCGTTGCTGACAAGGTTGCAAACGTGCAGA AAATCTTCATCTTCTTGACAGGTAAGAAGTGGAATTGGACGTTAAGGGTA TTCTACATTTGAGACAAGTAAAATAATCTTAAACACTAGAAAGGCCGTCA TGTGCTCCTGAGCAAATACAGCATGTTTTGCCCATACCCCTCCCCATGTA AAAATGGGCTGTCCCAAAATAACACCTTGTCAACATTTGCGAGAGCAACA CTCTTTGCCCATCTCCCGCCCAATGCATAAATTGACTCCCTGTGCAAAAA TGATTCTCTCTACAAGTTCTGTGAGACGGCAAGAGCCCTCCGCACAGTTT AGTAACTTCTTACCGCAAAGGCTAGCGAGATTTTTTGCAGAAACTGTGAG AATGTCTGTGCAACGTAACAGGCTTTATGATTTGTGTCTGTTTTAGGACG CTGCGGTTCGACCTTAATGACGCGACTTGTCGAGGCGACTTCCGTTGCAC AAGCTGTCAGCGAGCCACAAGTCTTTTCTGACATATGCATGGCACTACAT CGACTTAAGCAGTCCTCTCAACGTGGTCAGAGTCTGATTCCTCGAAGCTG TCCCACCGTACTGTCGAGCAAAGAGTCTACCATAGCCTTTTTGAGGAACC TCTGCACTGTGATGAACTACAACCTATTGATGTCGGACCCGCGTTGCCGC GACGTCATCTTCTATAAGTTAAGGATGGACGTCATCCTGATGGCTGACCT AATCGCTGGTGCCTTCCCGTCCGCCAAGACGATCTTTATGTACAGAAATG GCCTGGAATTTACTGAATCACTCGCACGACTCTATTTCCAAAGGTACGTG GTTTATTGGGCTATATCCTCAGTGGAGTGCCTTCGTCTGTGGAATTGGTC TGGGGACTTCCCTTACAGCACAAGATGTTTTGGAGACAACCCGAAGTACT CGACGGTGCGCCACCGCGGTACGATCTCGTTCTACCTGTACACGTGGTGG GCTAGTGTGATGCAGTGTGCCATTGACCTACAGAAGAAGCAGCCTGGGTA TTTCTTCCACGCCGTCATCGACTACTCAGCCCTCGTCAACAACAAAGAGA AGACGTTCCGTCTACTGATGAAGAAGCTCGGTTTAAGGTGGAGCCCAGAG GACCCAGGAGAAGACAAAGACAAGATGAAGAATGCATTGATCAAGGACAG CCAAGCAGGAACCGTCCTGTCTGCAAAGTAAGGCCACACACTTTTTCTAA TGGATGATTGTTGTGGTTCATTAATGAAGGTTAGACATCCAGGTAATAAG CAACTCAAGCAACTGGATAACATTTTATCCAGTTGCTTGAGTAACTATTT TTGGCGATTGTTTTGGTTTCTTGAATCGTTACGTTATGCCTGGTTCATAC ATGATTTGTACATAAACTTTTCAAATCAATTTTGCAGACAGCGAAGCCCA GGTGGCAGGTGGGCTCCGGACGTTTCATCCCGCTGGACAGGGCCGTGGGA ACGAGAGTATATTGGAGAAGTATGTCGCCGTGCCGGGAACGACATCACTG GCCCTGGCTTTCTCCTGCCAGGCACCATCCTGTAACATGTCTAAACAGGA TCCCATATGTCTGTGAAATGAGATTTTGTGAATTCTCTAAATATGGTACC CTAGGAGGCCCATTATCAAACTTGACTTTCCTTTACATGACCTCTAATCT TCTACCAAATATTATGCAGAACCATCCATGTAGCTTCTCGAGATATGCTG TTAACATACAAACACAATCAGACCACAGCCAATCCACCATAGAAAACAAA AATCATAACCTTCTGACAAAGGTAATGAGTCAGAATGAGATCATAATACT CACTGGTGCTCTGGCACAAGTATCTGTACCCCAATGGTGGTTTCCCTGTA GAGAAAACAG

Coding sequence (CDS) from alignment at Sc0000554:56221..65830+

>transcript:BL61964_cuf1 ID=transcript:BL61964_cuf1|Name=transcript:BL61964_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=7020bp|location=Sequence derived from alignment at Sc0000554:56221..65830+ (Branchiostoma lanceolatum)
ATGGATGTATTCACAGTGGTGGGAGCCATTGCAGCTCTAATTGCAGTTTG
TATCGCTGTCTTCCTCTTCGTCTCTCAACCTACTTCACGATCTTCACCTT
GGCCCAAGATTAAGCAGATCCTGGCTTACACTCAAAATGTGGTGCCAAAG
AAGATAACAAAACTTTACATGAGCGGCTGCTCTCTTGATGACTTCATACC
AGTTGGAGAAGTCACAGCAGTTCATGACGTGGCACGGTTCTTTGTCCATC
ATGGGAGCAAGTTTTCTGTTTACACTATCGACTGGGCACAAGAAGTCCTT
GTGCTGATCCGACATGTAGACGGTGTGGATCTAAAAGCACGCCCCATCTT
CTTTGTGGCCCAGAAGCGAAGTGCAACCGAGGTTCTCTGCATTCCCTTGG
AGCAGCTCCAAGCTGTAGCGACAGCCGTTGCTGACAAGGTTGCAAACGTG
CAGAAAATCTTCATCTTCTTGACAGGACGCTGCGGTTCGACCTTAATGAC
GCGACTTGTCGAGGCGACTTCCGTTGCACAAGCTGTCAGCGAGCCACAAG
TCTTTTCTGACATATGCATGGCACTACATCGACTTAAGCAGTCCTCTCAA
CGTGGTCAGAGTCTGATTCCTCGAAGCTGTCCCACCGTACTGTCGAGCAA
AGAGTCTACCATAGCCTTTTTGAGGAACCTCTGCACTGTGATGAACTACA
ACCTATTGATGTCGGACCCGCGTTGCCGCGACGTCATCTTCTATAAGTTA
AGGATGGACGTCATCCTGATGGCTGACCTAATCGCTGGTGCCTTCCCGTC
CGCCAAGACGATCTTTATGTACAGAAATGGCCTGGAATTTACTGAATCAC
TCGCACGACTCTATTTCCAAAGGTACGTGGTTTATTGGGCTATATCCTCA
GTGGAGTGCCTTCGTCTGTGGAATTGGTCTGGGGACTTCCCTTACAGCAC
AAGATGTTTTGGAGACAACCCGAAGTACTCGACGGTGCGCCACCGCGGTA
CGATCTCGTTCTACCTGTACACGTGGTGGGCTAGTGTGATGCAGTGTGCC
ATTGACCTACAGAAGAAGCAGCCTGGGTATTTCTTCCACGCCGTCATCGA
CTACTCAGCCCTCGTCAACAACAAAGAGAAGACGTTCCGTCTACTGATGA
AGAAGCTCGGTTTAAGGTGGAGCCCAGAGGACCCAGGAGAAGACAAAGAC
AAGATGAAGAATGCATTGATCAAGGACAGCCAAGCAGGAACCGTCCTGTC
TGCAAAACAGCGAAGCCCAGGTGGCAGGTGGGCTCCGGACGTTTCATCCC
GCTGGACAGGGCCGTGGGAACGAGAGTATATTGGAGAAGTATGTCGCCGT
GCCGGGAACGACATCACTGGCCCTGGCTTTCTCCTGCCAGGCACCATCCT
GTAAATGGATGTATTCACAGTGGTGGGAGCCATTGCAGCTCTAATTGCAG
TTTGTATCGCTGTCTTCCTCTTCGTCTCTCAACCTACTTCACGATCTTCA
CCTTGGCCCAAGATTAAGCAGATCCTGGCTTACACTCAAAATGTGGTGCC
AAAGAAGATAACAAAACTTTACATGAGCGGCTGCTCTCTTGATGACTTCA
TACCAGTTGGAGAAGTCACAGCAGTTCATGACGTGGCACGGTTCTTTGTC
CATCATGGGAGCAAGTTTTCTGTTTACACTATCGACTGGGCACAAGAAGT
CCTTGTGCTGATCCGACATGTAGACGGTGTGGATCTAAAAGCACGCCCCA
TCTTCTTTGTGGCCCAGAAGCGAAGTGCAACCGAGGTTCTCTGCATTCCC
TTGGAGCAGCTCCAAGCTGTAGCGACAGCCGTTGCTGACAAGGTTGCAAA
CGTGCAGAAAATCTTCATCTTCTTGACAGGACGCTGCGGTTCGACCTTAA
TGACGCGACTTGTCGAGGCGACTTCCGTTGCACAAGCTGTCAGCGAGCCA
CAAGTCTTTTCTGACATATGCATGGCACTACATCGACTTAAGCAGTCCTC
TCAACGTGGTCAGAGTCTGATTCCTCGAAGCTGTCCCACCGTACTGTCGA
GCAAAGAGTCTACCATAGCCTTTTTGAGGAACCTCTGCACTGTGATGAAC
TACAACCTATTGATGTCGGACCCGCGTTGCCGCGACGTCATCTTCTATAA
GTTAAGGATGGACGTCATCCTGATGGCTGACCTAATCGCTGGTGCCTTCC
CGTCCGCCAAGACGATCTTTATGTACAGAAATGGCCTGGAATTTACTGAA
TCACTCGCACGACTCTATTTCCAAAGGTACGTGGTTTATTGGGCTATATC
CTCAGTGGAGTGCCTTCGTCTGTGGAATTGGTCTGGGGACTTCCCTTACA
GCACAAGATGTTTTGGAGACAACCCGAAGTACTCGACGGTGCGCCACCGC
GGTACGATCTCGTTCTACCTGTACACGTGGTGGGCTAGTGTGATGCAGTG
TGCCATTGACCTACAGAAGAAGCAGCCTGGGTATTTCTTCCACGCCGTCA
TCGACTACTCAGCCCTCGTCAACAACAAAGAGAAGACGTTCCGTCTACTG
ATGAAGAAGCTCGGTTTAAGGTGGAGCCCAGAGGACCCAGGAGAAGACAA
AGACAAGATGAAGAATGCATTGATCAAGGACAGCCAAGCAGGAACCGTCC
TGTCTGCAAAACAGCGAAGCCCAGGTGGCAGGTGGGCTCCGGACGTTTCA
TCCCGCTGGACAGGGCCGTGGGAACGAGAGTATATTGGAGAAGTATGTCG
CCGTGCCGGGAACGACATCACTGGCCCTGGCTTTCTCCTGCCAGGCACCA
TCCTGTAAATGGATGTATTCACAGTGGTGGGAGCCATTGCAGCTCTAATT
GCAGTTTGTATCGCTGTCTTCCTCTTCGTCTCTCAACCTACTTCACGATC
TTCACCTTGGCCCAAGATTAAGCAGATCCTGGCTTACACTCAAAATGTGG
TGCCAAAGAAGATAACAAAACTTTACATGAGCGGCTGCTCTCTTGATGAC
TTCATACCAGTTGGAGAAGTCACAGCAGTTCATGACGTGGCACGGTTCTT
TGTCCATCATGGGAGCAAGTTTTCTGTTTACACTATCGACTGGGCACAAG
AAGTCCTTGTGCTGATCCGACATGTAGACGGTGTGGATCTAAAAGCACGC
CCCATCTTCTTTGTGGCCCAGAAGCGAAGTGCAACCGAGGTTCTCTGCAT
TCCCTTGGAGCAGCTCCAAGCTGTAGCGACAGCCGTTGCTGACAAGGTTG
CAAACGTGCAGAAAATCTTCATCTTCTTGACAGGACGCTGCGGTTCGACC
TTAATGACGCGACTTGTCGAGGCGACTTCCGTTGCACAAGCTGTCAGCGA
GCCACAAGTCTTTTCTGACATATGCATGGCACTACATCGACTTAAGCAGT
CCTCTCAACGTGGTCAGAGTCTGATTCCTCGAAGCTGTCCCACCGTACTG
TCGAGCAAAGAGTCTACCATAGCCTTTTTGAGGAACCTCTGCACTGTGAT
GAACTACAACCTATTGATGTCGGACCCGCGTTGCCGCGACGTCATCTTCT
ATAAGTTAAGGATGGACGTCATCCTGATGGCTGACCTAATCGCTGGTGCC
TTCCCGTCCGCCAAGACGATCTTTATGTACAGAAATGGCCTGGAATTTAC
TGAATCACTCGCACGACTCTATTTCCAAAGGTACGTGGTTTATTGGGCTA
TATCCTCAGTGGAGTGCCTTCGTCTGTGGAATTGGTCTGGGGACTTCCCT
TACAGCACAAGATGTTTTGGAGACAACCCGAAGTACTCGACGGTGCGCCA
CCGCGGTACGATCTCGTTCTACCTGTACACGTGGTGGGCTAGTGTGATGC
AGTGTGCCATTGACCTACAGAAGAAGCAGCCTGGGTATTTCTTCCACGCC
GTCATCGACTACTCAGCCCTCGTCAACAACAAAGAGAAGACGTTCCGTCT
ACTGATGAAGAAGCTCGGTTTAAGGTGGAGCCCAGAGGACCCAGGAGAAG
ACAAAGACAAGATGAAGAATGCATTGATCAAGGACAGCCAAGCAGGAACC
GTCCTGTCTGCAAAACAGCGAAGCCCAGGTGGCAGGTGGGCTCCGGACGT
TTCATCCCGCTGGACAGGGCCGTGGGAACGAGAGTATATTGGAGAAGTAT
GTCGCCGTGCCGGGAACGACATCACTGGCCCTGGCTTTCTCCTGCCAGGC
ACCATCCTGTAAATGGATGTATTCACAGTGGTGGGAGCCATTGCAGCTCT
AATTGCAGTTTGTATCGCTGTCTTCCTCTTCGTCTCTCAACCTACTTCAC
GATCTTCACCTTGGCCCAAGATTAAGCAGATCCTGGCTTACACTCAAAAT
GTGGTGCCAAAGAAGATAACAAAACTTTACATGAGCGGCTGCTCTCTTGA
TGACTTCATACCAGTTGGAGAAGTCACAGCAGTTCATGACGTGGCACGGT
TCTTTGTCCATCATGGGAGCAAGTTTTCTGTTTACACTATCGACTGGGCA
CAAGAAGTCCTTGTGCTGATCCGACATGTAGACGGTGTGGATCTAAAAGC
ACGCCCCATCTTCTTTGTGGCCCAGAAGCGAAGTGCAACCGAGGTTCTCT
GCATTCCCTTGGAGCAGCTCCAAGCTGTAGCGACAGCCGTTGCTGACAAG
GTTGCAAACGTGCAGAAAATCTTCATCTTCTTGACAGGACGCTGCGGTTC
GACCTTAATGACGCGACTTGTCGAGGCGACTTCCGTTGCACAAGCTGTCA
GCGAGCCACAAGTCTTTTCTGACATATGCATGGCACTACATCGACTTAAG
CAGTCCTCTCAACGTGGTCAGAGTCTGATTCCTCGAAGCTGTCCCACCGT
ACTGTCGAGCAAAGAGTCTACCATAGCCTTTTTGAGGAACCTCTGCACTG
TGATGAACTACAACCTATTGATGTCGGACCCGCGTTGCCGCGACGTCATC
TTCTATAAGTTAAGGATGGACGTCATCCTGATGGCTGACCTAATCGCTGG
TGCCTTCCCGTCCGCCAAGACGATCTTTATGTACAGAAATGGCCTGGAAT
TTACTGAATCACTCGCACGACTCTATTTCCAAAGGTACGTGGTTTATTGG
GCTATATCCTCAGTGGAGTGCCTTCGTCTGTGGAATTGGTCTGGGGACTT
CCCTTACAGCACAAGATGTTTTGGAGACAACCCGAAGTACTCGACGGTGC
GCCACCGCGGTACGATCTCGTTCTACCTGTACACGTGGTGGGCTAGTGTG
ATGCAGTGTGCCATTGACCTACAGAAGAAGCAGCCTGGGTATTTCTTCCA
CGCCGTCATCGACTACTCAGCCCTCGTCAACAACAAAGAGAAGACGTTCC
GTCTACTGATGAAGAAGCTCGGTTTAAGGTGGAGCCCAGAGGACCCAGGA
GAAGACAAAGACAAGATGAAGAATGCATTGATCAAGGACAGCCAAGCAGG
AACCGTCCTGTCTGCAAAACAGCGAAGCCCAGGTGGCAGGTGGGCTCCGG
ACGTTTCATCCCGCTGGACAGGGCCGTGGGAACGAGAGTATATTGGAGAA
GTATGTCGCCGTGCCGGGAACGACATCACTGGCCCTGGCTTTCTCCTGCC
AGGCACCATCCTGTAAATGGATGTATTCACAGTGGTGGGAGCCATTGCAG
CTCTAATTGCAGTTTGTATCGCTGTCTTCCTCTTCGTCTCTCAACCTACT
TCACGATCTTCACCTTGGCCCAAGATTAAGCAGATCCTGGCTTACACTCA
AAATGTGGTGCCAAAGAAGATAACAAAACTTTACATGAGCGGCTGCTCTC
TTGATGACTTCATACCAGTTGGAGAAGTCACAGCAGTTCATGACGTGGCA
CGGTTCTTTGTCCATCATGGGAGCAAGTTTTCTGTTTACACTATCGACTG
GGCACAAGAAGTCCTTGTGCTGATCCGACATGTAGACGGTGTGGATCTAA
AAGCACGCCCCATCTTCTTTGTGGCCCAGAAGCGAAGTGCAACCGAGGTT
CTCTGCATTCCCTTGGAGCAGCTCCAAGCTGTAGCGACAGCCGTTGCTGA
CAAGGTTGCAAACGTGCAGAAAATCTTCATCTTCTTGACAGGACGCTGCG
GTTCGACCTTAATGACGCGACTTGTCGAGGCGACTTCCGTTGCACAAGCT
GTCAGCGAGCCACAAGTCTTTTCTGACATATGCATGGCACTACATCGACT
TAAGCAGTCCTCTCAACGTGGTCAGAGTCTGATTCCTCGAAGCTGTCCCA
CCGTACTGTCGAGCAAAGAGTCTACCATAGCCTTTTTGAGGAACCTCTGC
ACTGTGATGAACTACAACCTATTGATGTCGGACCCGCGTTGCCGCGACGT
CATCTTCTATAAGTTAAGGATGGACGTCATCCTGATGGCTGACCTAATCG
CTGGTGCCTTCCCGTCCGCCAAGACGATCTTTATGTACAGAAATGGCCTG
GAATTTACTGAATCACTCGCACGACTCTATTTCCAAAGGTACGTGGTTTA
TTGGGCTATATCCTCAGTGGAGTGCCTTCGTCTGTGGAATTGGTCTGGGG
ACTTCCCTTACAGCACAAGATGTTTTGGAGACAACCCGAAGTACTCGACG
GTGCGCCACCGCGGTACGATCTCGTTCTACCTGTACACGTGGTGGGCTAG
TGTGATGCAGTGTGCCATTGACCTACAGAAGAAGCAGCCTGGGTATTTCT
TCCACGCCGTCATCGACTACTCAGCCCTCGTCAACAACAAAGAGAAGACG
TTCCGTCTACTGATGAAGAAGCTCGGTTTAAGGTGGAGCCCAGAGGACCC
AGGAGAAGACAAAGACAAGATGAAGAATGCATTGATCAAGGACAGCCAAG
CAGGAACCGTCCTGTCTGCAAAACAGCGAAGCCCAGGTGGCAGGTGGGCT
CCGGACGTTTCATCCCGCTGGACAGGGCCGTGGGAACGAGAGTATATTGG
AGAAGTATGTCGCCGTGCCGGGAACGACATCACTGGCCCTGGCTTTCTCC
TGCCAGGCACCATCCTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL61964gene:BL61964Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL61964_cuf1transcript:BL61964_cuf1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL61964_cuf1-E1BL61964_cuf1-E1-1564476830-481507Branchiostoma lanceolatumexon
BL61964_cuf1-E2BL61964_cuf1-E2-1564476830-481510Branchiostoma lanceolatumexon
BL61964_cuf1-E3BL61964_cuf1-E3-1564476830-481512Branchiostoma lanceolatumexon
BL61964_cuf1-E4BL61964_cuf1-E4-1564476830-481514Branchiostoma lanceolatumexon
BL61964_cuf1-E5BL61964_cuf1-E5-1564476830-481516Branchiostoma lanceolatumexon
BL61964_cuf1-E6BL61964_cuf1-E6-1564476830-481519Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000554genomeSc0000554:56221..65830 +
Properties
Property NameValue
Transcript idBL61964_cuf1
Biotypeprotein_coding