|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL62023_cuf0 >transcript:BL62023_cuf0-protein ID=transcript:BL62023_cuf0-protein|Name=transcript:BL62023_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=277bp
QRLQGVRLRSATLQKLYLYNLWSVSFVSLWTPQLRSLHLDAGLENLEHLE
VFAPKLRKLQVDGSGVLRTLSVKSNKLSNVELYNCEMLDGLGFTRCLGSN
ITVTVLSLGSIGMEALSLDQNRCPSLRELRLLADFRCTSLHLSCPTLRRL
CADGDVMLPTLQIVSVVARHVDRLHLANVPGLQSLTVQCDRVDLVEINTT
GNVNVCLENCALQAVEELGTLRLFDCQVQALVLSAPLVRQLVLYRCVVTD
YSLCMALRGCPNIQRLQLQKCSSLTRV Run BLAST on NCBI mRNA from alignment at xfSc0006347:1..1364- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL62023_cuf0 ID=transcript:BL62023_cuf0|Name=transcript:BL62023_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1364bp|location=Sequence derived from alignment at xfSc0006347:1..1364- (Branchiostoma lanceolatum)
ACAGAGACTACAGGGCGTGCGCCTGCGCTCTGCGACCCTGCAAAAGCTGT
ACCTGTACAACCTGTGGAGCGTCAGCTTCGTCAGTCTGTGGACGCCGCAG
CTGCGCAGTCTGCACCTGGACGCCGGGCTGGAGAACCTGGAACACCTGGA
GGTGTTCGCACCGAAACTCAGGAAGCTGCAGGTGGACGGCAGCGGCGTTC
TCAGGTCAGTACTAAGGTATAGGAGAATGTACTAGTACTTGTTCCTTCAT
TGAGAGCCTTTCAGTGTAACGCTAGGATTTTCTCTAGCTCACACCGTTAA
ACTGTTCAATTTACCAGTCATAAAGTCCTTCTACAGCAACAGATTCTTTC
CACAGACCGCCAAACTATGGAACTCTCTCTATGACAAGTGTTTCCATCCC
ATATTCAGCCAGCAAGCCTTCAAAACCAATGTTCACCGCTATTTCCTAGC
ATAATCATTTACATCGTCCATCAACTTACCATAGTTCAATGCTTAGAAGT
GAGAGACTTTCCCAGGTTATTGTTTCATTGCGAACCGGAAGGGCAAATAT
TAGCCATAGAATACAGTACGGGGTAGATTGAGATTTAATGGACATGATGG
CAGCAAATGCACACAGTTGTTGTGGCGCCCGTTAACTGCGACATAACGTC
ACATGACATGATGCATGTGATAGCTCACCTCCGTGACACTAAAAGATTGC
TTCTTATGAGCATCTTGTTTATTTGCCACCATCCAGGACCCTGAGTGTGA
AGAGCAACAAACTGTCCAACGTAGAGCTCTACAACTGTGAAATGCTGGAT
GGGCTGGGCTTTACCCGCTGTCTGGGCAGCAACATCACGGTCACCGTCCT
GTCGCTGGGCAGCATAGGCATGGAGGCATTGTCTCTCGACCAGAACCGTT
GCCCCAGCTTGCGAGAACTACGTCTCCTAGCGGACTTTCGTTGTACTTCA
CTCCACCTGTCATGCCCGACCCTAAGAAGGCTGTGTGCGGACGGTGACGT
CATGTTGCCCACGTTACAGATTGTCTCGGTTGTGGCGAGACATGTGGACA
GGCTTCACCTCGCGAACGTGCCGGGGCTTCAAAGTTTAACTGTGCAGTGT
GACCGCGTAGATCTTGTGGAAATCAACACGACGGGAAATGTCAACGTCTG
CCTAGAGAACTGCGCCCTGCAAGCAGTAGAAGAGTTAGGCACACTGAGGC
TTTTCGACTGCCAGGTACAGGCACTCGTTCTGAGCGCCCCCTTGGTGCGG
CAGTTGGTACTGTACCGCTGCGTGGTGACGGACTACAGTCTGTGCATGGC
GCTACGCGGATGTCCGAACATCCAACGCTTGCAGTTGCAGAAGTGCAGCT
CGCTAACACGTGTC Coding sequence (CDS) from alignment at xfSc0006347:1..1364- >transcript:BL62023_cuf0 ID=transcript:BL62023_cuf0|Name=transcript:BL62023_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1662bp|location=Sequence derived from alignment at xfSc0006347:1..1364- (Branchiostoma lanceolatum)
CAGAGACTACAGGGCGTGCGCCTGCGCTCTGCGACCCTGCAAAAGCTGTA
CCTGTACAACCTGTGGAGCGTCAGCTTCGTCAGTCTGTGGACGCCGCAGC
TGCGCAGTCTGCACCTGGACGCCGGGCTGGAGAACCTGGAACACCTGGAG
GTGTTCGCACCGAAACTCAGGAAGCTGCAGGTGGACGGCAGCGGCGTTCT
CAGGACCCTGAGTGTGAAGAGCAACAAACTGTCCAACGTAGAGCTCTACA
ACTGTGAAATGCTGGATGGGCTGGGCTTTACCCGCTGTCTGGGCAGCAAC
ATCACGGTCACCGTCCTGTCGCTGGGCAGCATAGGCATGGAGGCATTGTC
TCTCGACCAGAACCGTTGCCCCAGCTTGCGAGAACTACGTCTCCTAGCGG
ACTTTCGTTGTACTTCACTCCACCTGTCATGCCCGACCCTAAGAAGGCTG
TGTGCGGACGGTGACGTCATGTTGCCCACGTTACAGATTGTCTCGGTTGT
GGCGAGACATGTGGACAGGCTTCACCTCGCGAACGTGCCGGGGCTTCAAA
GTTTAACTGTGCAGTGTGACCGCGTAGATCTTGTGGAAATCAACACGACG
GGAAATGTCAACGTCTGCCTAGAGAACTGCGCCCTGCAAGCAGTAGAAGA
GTTAGGCACACTGAGGCTTTTCGACTGCCAGGTACAGGCACTCGTTCTGA
GCGCCCCCTTGGTGCGGCAGTTGGTACTGTACCGCTGCGTGGTGACGGAC
TACAGTCTGTGCATGGCGCTACGCGGATGTCCGAACATCCAACGCTTGCA
GTTGCAGAAGTGCAGCTCGCTAACACGTGTCCAGAGACTACAGGGCGTGC
GCCTGCGCTCTGCGACCCTGCAAAAGCTGTACCTGTACAACCTGTGGAGC
GTCAGCTTCGTCAGTCTGTGGACGCCGCAGCTGCGCAGTCTGCACCTGGA
CGCCGGGCTGGAGAACCTGGAACACCTGGAGGTGTTCGCACCGAAACTCA
GGAAGCTGCAGGTGGACGGCAGCGGCGTTCTCAGGACCCTGAGTGTGAAG
AGCAACAAACTGTCCAACGTAGAGCTCTACAACTGTGAAATGCTGGATGG
GCTGGGCTTTACCCGCTGTCTGGGCAGCAACATCACGGTCACCGTCCTGT
CGCTGGGCAGCATAGGCATGGAGGCATTGTCTCTCGACCAGAACCGTTGC
CCCAGCTTGCGAGAACTACGTCTCCTAGCGGACTTTCGTTGTACTTCACT
CCACCTGTCATGCCCGACCCTAAGAAGGCTGTGTGCGGACGGTGACGTCA
TGTTGCCCACGTTACAGATTGTCTCGGTTGTGGCGAGACATGTGGACAGG
CTTCACCTCGCGAACGTGCCGGGGCTTCAAAGTTTAACTGTGCAGTGTGA
CCGCGTAGATCTTGTGGAAATCAACACGACGGGAAATGTCAACGTCTGCC
TAGAGAACTGCGCCCTGCAAGCAGTAGAAGAGTTAGGCACACTGAGGCTT
TTCGACTGCCAGGTACAGGCACTCGTTCTGAGCGCCCCCTTGGTGCGGCA
GTTGGTACTGTACCGCTGCGTGGTGACGGACTACAGTCTGTGCATGGCGC
TACGCGGATGTCCGAACATCCAACGCTTGCAGTTGCAGAAGTGCAGCTCG
CTAACACGTGTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0006347 | genome | xfSc0006347:1..1364 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL62023_cuf0 |
| Biotype | protein_coding |
|
