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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL62074_cuf0 >transcript:BL62074_cuf0-protein ID=transcript:BL62074_cuf0-protein|Name=transcript:BL62074_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=211bp
LKMEQRHRDILRRNRVKLVKNVKVQHITNFLIQEDVLTDTMVEEIMAEKT
SHGRVEQLLDTLVTRGPKAFMMFCKSLEELYGWLSKDLLEQDQRRGGTTT
AVQCQEDVLEDKMARMNLQDSPRGKEILTEKELNKLADKLGAEWEKLAIE
LDFKKSELYKFKEDNKNNVHAQIFDMLCKWKEKQGRKATVGNLIHSMHEV
SIGEDVYKFLL Run BLAST on NCBI mRNA from alignment at Sc0000362:226216..229509+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL62074_cuf0 ID=transcript:BL62074_cuf0|Name=transcript:BL62074_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3294bp|location=Sequence derived from alignment at Sc0000362:226216..229509+ (Branchiostoma lanceolatum)
TTGAAGATGGAGCAGAGACATCGGGACATCCTGAGGAGGAACCGGGTGAA
GCTGGTGAAGAACGTCAAAGTGCAGCACATCACCAACTTTCTCATACAGG
TCAGCCATTGGTCAGGAGGCACACGATCCTTAATCAAATCAACCATTTCT
TATTACTGGTGACTTTAATAGCACCTGAAGTAAGATTTGGCGGCTTCCTA
CATGTAGATATCACACAATTTGTGCCATATTTCCCCTCCACACCTTTTAA
AGCTGTAATATTACTTTTCATTTTACAAGAGACCACTTACAATTCTGTGA
ATGCAATGGTCTTAATTGTCTGATCGACTTATTCTGAACATATGTGAATT
TCCAACTTTGTTATCCAATTTTTAGTTTATTTGACCCATATGACTAGAAT
GTAAACAAAGTATGCATACTTTTACATTCAGGAGTAACCATTGTACACAT
GTATATCATTATACAAAACCTGTCAAATTCTGGAAGTTGACATGATTTAA
CTACATGTATTTTATATCCTCTGTGGCAGGAGGACGTTCTGACCGACACC
ATGGTGGAGGAAATCATGGCAGAGAAAACCAGTCATGGCCGGGTAGAACA
GCTGCTGGACACACTGGTAACCAGGGGACCCAAGGCTTTCATGGTAGGAT
CAACATCATGGTCATATCCAACTTTTGTTTGAGTAGATTTATAGCGTATG
AATTCAATTGGACACCTAAGGGATGGTATGTACAAAATGTATCATCTTTC
AGATGTATTGTTTGGGTTATACAGAAAGAAAATAAAGAAATCAAAACTTA
TTATGTAATGAGGTCACTGAAAAAATTACAGCTCAGTCTCACTACTCTTT
CTTGGATGAAAGGGGCTAGCAGTTCCATTTGAAAGTTACGGGGGCAGGCT
GAACCATGCTTCAAAATTCAAGGGATGAAAAGGGACAGAAGCTGTTCACT
TTAAGTCTTATAGCACTTAGCAAGCAGTTGGTTATGTGATATTTTGATTT
GAACTGTCTTCATTTTTGTACACTTGACAGTAATGTTGGTTCTATGTACA
AATTGTACATGTAGATGTTCTGTAAGTCCTTGGAGGAACTCTATGGCTGG
CTGAGTAAGGATCTACTGGAGCAAGACCAGAGGAGAGGGGGAACAACTAC
TGCTGTACAGTGTCAAGGTGTGAAGACTTCACTTTTAAATCAAACTGTTT
CACAGAGAGATAATTTGCGGCATGGTAATGACAAACCATAGATCCCTAAG
TTTATGCACACCAATGCACAGTACCACATATTAAAAAAAAAAAACTACAA
TTGATATTCTTGATATATATCAAGTACTTTCAGGGGGTGGATACAACTGT
GTAGTAGAAACATTTATGGTATTTCAGTGTAGGTCCCTAACACTTTTTGA
AAAAAAAGTACTATCAACCGCAGATGCTGATAATGTGTGCATAATTACAT
GTATGTGGTTGAATAAGACAACATTTCTGGAATCACTGGTAAACATGACA
ATGAAGCATCCCCTTGCAAAAACAAATCCATTGCTCACATTTTCCATCTA
ACCATGTGTAAACATCACTGTCTCCTGTTTTCCACAGAGGATGTGCTAGA
GGACAAAATGGCGAGGATGAACCTACAGGACTCCCCAAGGGGGAAGGAGA
TCCTGACAGAGAAGGAACTGAACAAGTTAGCCGACAAACTTGGTGCTGAG
TGGGAAAAACTGGCCATAGAACTGGACTTCAAAAAGTCAGAACTCTACAA
ATTCAAAGAGGACAATAAGAACAATGTACATGCACAGATATTTGACATGC
TCTGTAAATGGAAAGAAAAACAGGGACGAAAGGCCACAGTAGGAAACCTG
ATTCACAGTATGCACGAAGTTAGCATAGGTGAAGATGTGTACAAGTTTCT
TTTATAAGAGCCAAGGGGTTGAACATTTTAGAATCAATTCTTTTTGTTAT
GATATCTAGTGTTAATCTTGATTTTGCAACACAAGGCCAGCTGGTAATGG
CAAAATTAGACCAGGATACAGCATGGCATCTATACCAACTATGTGCCTTT
TGTCCTGAATATAAGATCAGTCAATGACTTATTGCAGCTGACGAGGCTAT
CTGTTTGTTGACCTTTAGTTCGTCAAAATTAGGTTTTAGTTTCACAAATG
GAACTATGGCCATAAATAAGTGCTCAATCCACTGGACTGAGATGCTAAAA
TCAAATACTGTCATTACATTCTGCAACTTTGAACTGTCTTTGTAACATTC
AAAATAAATAAAAACACACACTCAGCATCAATGCCATAGATATGATTATA
TTTTGCACACTACAAATTTTTGTGTCAGAAGCATGCTATGTTGCTTTCCT
GCTTAAACTTTTTTGAGAATGGGTTGTAATGCAACCTTTGTACAATTTTT
TCATACTGAGCCCTTGATACTGTTGTAGTTAAATGCTTCAAGGTGATTTT
GCAGCCAGGAATAACTACTATGAGATGTACAATTGAAGTTGCCTTTTTAT
CCACTTGGATCTCAGGAATCTAAGTGTCTTATTGTTCCTTCAAATGCTCT
GCCGATTGCACCATTAAGGTGAAAAAATTGTACATCTGTCTCTAAAATAA
GATTTTTCCTACTGTTCATGTGCATAATTGTTGTATATCATTGTGACCTA
AAAGCCTTTATTCATGTATATGTGACCTGTACATCTGTCAATCACTCTCT
AAGCTCCAAGCAGCAAAATCTGGGCCTGGAAAGAAAAGAGACACTTGTAA
GATCTATAAGATCTGTTAGACTATATTGACTTGTCATTCATTCAACTTAA
TTATCATTTAAAAAGTTTGTCTTCCATTTAGACATGTATTAGTGACGTTC
AATCTACTTTTTTTCAACGTAATGTAAAAAAATAATTCTGAGAAAAATGG
TCAAAGTCATCAGCATAAGGAAAAAAATAAGTAAGACTATTGACCAAGAA
AAGTATCTACTTCAGCAACTGTTTCAGTTTTTAAATACATACAGCAACAT
GATTGTTTCATTGTGTGACTTGAAACTTTGAAGAAACTGTGGAGGTGAAA
TACAAATTGCTTTTTACCTGTTGTTGAAGTCCTGGTAGACTCCTGCCAGC
TGTAGCTGGTACTGCACGTGGTTGTTGAGGTAGGTTTGTATCATGTCTGG
ATGACGAGGATCAACCTCCAGCCAAATAGATCTGGTCATGAAACAGCAAA
TTGCTTCCAGTTATTCATTTCCATCAAGAGCTGTCATGTCATGAATGCCT
CAAAATGCAGCAAAGTCTTCCACACAAATGAGCAGCAAGGATGC Coding sequence (CDS) from alignment at Sc0000362:226216..229509+ >transcript:BL62074_cuf0 ID=transcript:BL62074_cuf0|Name=transcript:BL62074_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2544bp|location=Sequence derived from alignment at Sc0000362:226216..229509+ (Branchiostoma lanceolatum)
TTGAAGATGGAGCAGAGACATCGGGACATCCTGAGGAGGAACCGGGTGAA
GCTGGTGAAGAACGTCAAAGTGCAGCACATCACCAACTTTCTCATACAGG
AGGACGTTCTGACCGACACCATGGTGGAGGAAATCATGGCAGAGAAAACC
AGTCATGGCCGGGTAGAACAGCTGCTGGACACACTGGTAACCAGGGGACC
CAAGGCTTTCATGATGTTCTGTAAGTCCTTGGAGGAACTCTATGGCTGGC
TGAGTAAGGATCTACTGGAGCAAGACCAGAGGAGAGGGGGAACAACTACT
GCTGTACAGTGTCAAGAGGATGTGCTAGAGGACAAAATGGCGAGGATGAA
CCTACAGGACTCCCCAAGGGGGAAGGAGATCCTGACAGAGAAGGAACTGA
ACAAGTTAGCCGACAAACTTGGTGCTGAGTGGGAAAAACTGGCCATAGAA
CTGGACTTCAAAAAGTCAGAACTCTACAAATTCAAAGAGGACAATAAGAA
CAATGTACATGCACAGATATTTGACATGCTCTGTAAATGGAAAGAAAAAC
AGGGACGAAAGGCCACAGTAGGAAACCTGATTCACAGTATGCACGAAGTT
AGCATAGGTGAAGATGTGTACAAGTTTCTTTTATAATTGAAGATGGAGCA
GAGACATCGGGACATCCTGAGGAGGAACCGGGTGAAGCTGGTGAAGAACG
TCAAAGTGCAGCACATCACCAACTTTCTCATACAGGAGGACGTTCTGACC
GACACCATGGTGGAGGAAATCATGGCAGAGAAAACCAGTCATGGCCGGGT
AGAACAGCTGCTGGACACACTGGTAACCAGGGGACCCAAGGCTTTCATGA
TGTTCTGTAAGTCCTTGGAGGAACTCTATGGCTGGCTGAGTAAGGATCTA
CTGGAGCAAGACCAGAGGAGAGGGGGAACAACTACTGCTGTACAGTGTCA
AGAGGATGTGCTAGAGGACAAAATGGCGAGGATGAACCTACAGGACTCCC
CAAGGGGGAAGGAGATCCTGACAGAGAAGGAACTGAACAAGTTAGCCGAC
AAACTTGGTGCTGAGTGGGAAAAACTGGCCATAGAACTGGACTTCAAAAA
GTCAGAACTCTACAAATTCAAAGAGGACAATAAGAACAATGTACATGCAC
AGATATTTGACATGCTCTGTAAATGGAAAGAAAAACAGGGACGAAAGGCC
ACAGTAGGAAACCTGATTCACAGTATGCACGAAGTTAGCATAGGTGAAGA
TGTGTACAAGTTTCTTTTATAATTGAAGATGGAGCAGAGACATCGGGACA
TCCTGAGGAGGAACCGGGTGAAGCTGGTGAAGAACGTCAAAGTGCAGCAC
ATCACCAACTTTCTCATACAGGAGGACGTTCTGACCGACACCATGGTGGA
GGAAATCATGGCAGAGAAAACCAGTCATGGCCGGGTAGAACAGCTGCTGG
ACACACTGGTAACCAGGGGACCCAAGGCTTTCATGATGTTCTGTAAGTCC
TTGGAGGAACTCTATGGCTGGCTGAGTAAGGATCTACTGGAGCAAGACCA
GAGGAGAGGGGGAACAACTACTGCTGTACAGTGTCAAGAGGATGTGCTAG
AGGACAAAATGGCGAGGATGAACCTACAGGACTCCCCAAGGGGGAAGGAG
ATCCTGACAGAGAAGGAACTGAACAAGTTAGCCGACAAACTTGGTGCTGA
GTGGGAAAAACTGGCCATAGAACTGGACTTCAAAAAGTCAGAACTCTACA
AATTCAAAGAGGACAATAAGAACAATGTACATGCACAGATATTTGACATG
CTCTGTAAATGGAAAGAAAAACAGGGACGAAAGGCCACAGTAGGAAACCT
GATTCACAGTATGCACGAAGTTAGCATAGGTGAAGATGTGTACAAGTTTC
TTTTATAATTGAAGATGGAGCAGAGACATCGGGACATCCTGAGGAGGAAC
CGGGTGAAGCTGGTGAAGAACGTCAAAGTGCAGCACATCACCAACTTTCT
CATACAGGAGGACGTTCTGACCGACACCATGGTGGAGGAAATCATGGCAG
AGAAAACCAGTCATGGCCGGGTAGAACAGCTGCTGGACACACTGGTAACC
AGGGGACCCAAGGCTTTCATGATGTTCTGTAAGTCCTTGGAGGAACTCTA
TGGCTGGCTGAGTAAGGATCTACTGGAGCAAGACCAGAGGAGAGGGGGAA
CAACTACTGCTGTACAGTGTCAAGAGGATGTGCTAGAGGACAAAATGGCG
AGGATGAACCTACAGGACTCCCCAAGGGGGAAGGAGATCCTGACAGAGAA
GGAACTGAACAAGTTAGCCGACAAACTTGGTGCTGAGTGGGAAAAACTGG
CCATAGAACTGGACTTCAAAAAGTCAGAACTCTACAAATTCAAAGAGGAC
AATAAGAACAATGTACATGCACAGATATTTGACATGCTCTGTAAATGGAA
AGAAAAACAGGGACGAAAGGCCACAGTAGGAAACCTGATTCACAGTATGC
ACGAAGTTAGCATAGGTGAAGATGTGTACAAGTTTCTTTTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000362 | genome | Sc0000362:226216..229509 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL62074_cuf0 |
| Biotype | protein_coding |
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