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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL62455_cuf1 >transcript:BL62455_cuf1-protein ID=transcript:BL62455_cuf1-protein|Name=transcript:BL62455_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=114bp
MFVTLEFDHLFHSSPDHWKMKLSVCVLFLGCLVLAAAFPAPREEELAGLL
TELRDVVAGFAELQLQEAGMQMEKRIDQAKYDACYKHCINIGGRASKCRT
DCRRRFATEKNTAE Run BLAST on NCBI mRNA from alignment at Sc0000012:1531307..1534116- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL62455_cuf1 ID=transcript:BL62455_cuf1|Name=transcript:BL62455_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2810bp|location=Sequence derived from alignment at Sc0000012:1531307..1534116- (Branchiostoma lanceolatum)
ATTATGGATCAGAAAGATCCGAACGGCCAGTAACCTTTTAATGGGAATAA
TTAAAAGGACAAGCTGAGAAGTAGCTTTGAAGTTCAGATGTTTTGGTATA
ATTTATTATGAAAACGATCCTCAACTAAATTTCCAACACAAATAATATTG
GACGCTTTGTTTCGACTAAAGAAGAAGCTGTGGAAGCTCGCAATCTATGA
GTCCATGTTTGTAACATTAGAATTTGATCATCTTTTCCACAGTTCACCAG
ACCATTGGAAGATGAAGCTGTCCGTGTGCGTCCTTTTCCTGGGCTGCCTG
GTGCTCGCCGCCGCCTTCCCTGCTCCGCGTGAAGAGGAGCTGGCCGGCCT
GCTGACCGAGCTGCGAGATGTGGTGGCTGGTTTCGCAGGTAAATTTATTT
TTTCATCTATTTTCTTTTAACGAACTCGCTCAGTGCAAGGCCGTAGGGGG
CCACTCATGTAAGCACTGAACTAATTCTTATTGTAGCAGCATCTCGTCAC
CATAGGTCAGAAACATCTATGCTCGAGACAAGCATGACTTCACTGACCCA
TTAGGAGAAGCAGGGGTTACGAAGGCTGTTCGGGAAATTCCCTACCTCAT
TCAGGCCGGAATATTCTGATCCACTCACATAGGGGCATGCCCCTACTCTT
TTTCGAAAGATGTGGTGGGTTCTTTTACGTGCTCAAGGTGTGACTCTCCT
CAAACACGGGACCTCCACTTAACGTCCTATCCGAGGGACGTCCCTAATGA
AAGTTAGGTAGTACTCATTTACGCCCGACTGAAATTAGGAAATTTGTGTT
AAGTGCCTTTCCCAAGGGCAAGCTCTTTCAGGAAAGCAATCGATTACATC
AAACAGGCAATAAAGATGTACAGGAGTATCTATGGTCAGACTACAGCATA
TCCCGACATTGCTACATTTCCCAACAACATTGGGGGTATATGGGATGATC
TGGGTGATTACAGGAAAACAATCAGGTACTTTGAACAGGCCTTACAGATG
CTCAGGCGTATTTATGGTCCCGAAACACTCAATCTTGACATAGCCATGCT
TATTTATTCATTTATTAATCTTTAGGGTAGTCCCTTCAGTTAACAAGTAA
CTGATTTCCAAGGGAGCCCTACTAACAACATAGGCTGGGGCAGTTTTCTT
AACACATGCCAAAGATTATAAAAAGGCTATCAGCTATTTTGACAGAGCAC
TGCAGATAGTCAGAAGACTATATGACCAGAGTGCGGTACAGTTTCATGTC
GTACAGCTTCATGTCATAAAAAGATAGGCGTGGCCTGAAACCTTGATTGG
CTAGTGGTCGGGGGCATGGTTGGTTATGTGTAACCGGGGCTTTATCGATA
AATGCGGTGGGACCTTTAACGTACCCGAGGCGTGGCCCTCCCCTAACACT
GGACCTCCCATCCGACTCATCCAAGAGGACGTCCGTAGAGCCCCCATTTC
ACCAGACAGGGATCTCGCTGCACTCTCCCTGCGACCCAAATCGGATTTGT
GTACCTTTTGACTGCACCTCATGATTGGAATATCATGGAAAATGTATGCA
AGAAGTATGACTAAAGAGACCACAGAAGACACAAAGCGCAAAAAAAGATT
AGTCTTTTTATCTTTGAAATTCGTTGAGTGCTTTGTTAAATAGGTCACAG
AGAGCGCGCGGCGAGAGCGCCGTCCCATGTAGTGGAATGGGGTTTAACTC
ATGTTCCACAACCACAAGGTCGCCTTGTGACCTGCACATTTCTATTCTCC
AAGCAGAGGTTTCAGTCGAGTATGTACGTAGGGTAGGAGTGTCGGGGATT
TTTTACGTCTCTCACTCCCTTGTGAAGGTCCCTACTCGACCGAAACCTCT
GCTTGGAGAATACACATTTCAGCTGAAATGTACTGTGCGGCTGAATTCCG
TAATAACTGTGACGTAACGTTTGTCCAGACAATGCTGTTTATCTAGACTA
ATTTTACCGTCACTAATTGTTGTCAAGTTCACAAGTCGGCAGTATTTCTG
ACATCGCCTTTATTTCTTTTCTTGCCCTAAAAGAGCTACAGCTGCAGGAG
GCTGGGATGCAGATGGAGAAGCGGATCGACCAGGCGAAATATGACGCATG
CTACAAGCACTGCATTAATATCGGAGGCCGGGCGAGCAAGTGCAGGACGG
ATTGCAGAAGGCGATTTGCTACTGAAAAAAATACTGCTGAATAACTGACA
CCAAATTTGGAAGCAAACTATTGCCCTTAGAAAGGTAGCAGGACCACTGA
TATGAAACGTTGACGGATAAATGGATGTGAAAACCTAGATGTTGACAGAC
TAATAGCTTTATTTCTTTTAAAAAGTAGCAGGCTTTCCCCTGACGCATAA
CTAACTGGAGAAATACCACAAACGAATTGAAACCTCTGTTTCCAAAGTGA
TATTTACGTTTTTTAGTTATTTCTAATGTCTTTCGTGGTGATTAGGGTTT
ATGATATTACTATAGCCCATTGCATTCTTCAGTAAAACAGCAAATTTACA
AGAGGTATGGATAATTTTGTGGTGTGAATAATTCTGTTGTTAACTGTAAT
GGCGTGCAGAATGGTTTTATGTAATTGTTGTAGCCTGAAAGTGTCTGCGT
TACATACTTCTGATATTACAGAATTTGCACAAATATTCTGACAACCGATG
CATCAAATGTTATTACTAATATCAATAGGAGATTTTCGAGAAATTAGTAG
TTTCAATTCATTGTATTACTATTAGATAATGTTTTAAGACATTAACCAAA
GGAATTGCAGAGAATGTTTGAATATGGATAATAAAACTGGTGATCGGTCT
TAAATACACG Coding sequence (CDS) from alignment at Sc0000012:1531307..1534116- >transcript:BL62455_cuf1 ID=transcript:BL62455_cuf1|Name=transcript:BL62455_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=690bp|location=Sequence derived from alignment at Sc0000012:1531307..1534116- (Branchiostoma lanceolatum)
ATGTTTGTAACATTAGAATTTGATCATCTTTTCCACAGTTCACCAGACCA
TTGGAAGATGAAGCTGTCCGTGTGCGTCCTTTTCCTGGGCTGCCTGGTGC
TCGCCGCCGCCTTCCCTGCTCCGCGTGAAGAGGAGCTGGCCGGCCTGCTG
ACCGAGCTGCGAGATGTGGTGGCTGGTTTCGCAGAGCTACAGCTGCAGGA
GGCTGGGATGCAGATGGAGAAGCGGATCGACCAGGCGAAATATGACGCAT
GCTACAAGCACTGCATTAATATCGGAGGCCGGGCGAGCAAGTGCAGGACG
GATTGCAGAAGGCGATTTGCTACTGAAAAAAATACTGCTGAATAAATGTT
TGTAACATTAGAATTTGATCATCTTTTCCACAGTTCACCAGACCATTGGA
AGATGAAGCTGTCCGTGTGCGTCCTTTTCCTGGGCTGCCTGGTGCTCGCC
GCCGCCTTCCCTGCTCCGCGTGAAGAGGAGCTGGCCGGCCTGCTGACCGA
GCTGCGAGATGTGGTGGCTGGTTTCGCAGAGCTACAGCTGCAGGAGGCTG
GGATGCAGATGGAGAAGCGGATCGACCAGGCGAAATATGACGCATGCTAC
AAGCACTGCATTAATATCGGAGGCCGGGCGAGCAAGTGCAGGACGGATTG
CAGAAGGCGATTTGCTACTGAAAAAAATACTGCTGAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000012 | genome | Sc0000012:1531307..1534116 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL62455_cuf1 |
| Biotype | protein_coding |
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