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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL62851_cuf0 >transcript:BL62851_cuf0-protein ID=transcript:BL62851_cuf0-protein|Name=transcript:BL62851_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=107bp
MGVQTSSSPSHLTSPHLVPSSSFGSGNMVAFSMSFLHPSLSFALWVHSAN
DLPVHSFMSSPHLLRGLPRLLLPKIFLCSMWVELFCARVTCPKHCSFLLF
TMFNSVL Run BLAST on NCBI mRNA from alignment at Sc0000647:54272..58212+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL62851_cuf0 ID=transcript:BL62851_cuf0|Name=transcript:BL62851_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3941bp|location=Sequence derived from alignment at Sc0000647:54272..58212+ (Branchiostoma lanceolatum)
CCGGCCGGTTACCCGCCGGTAGGTCCTGATGTACAAGTCCAGGTCGGAGG
TAAGCTTTTCCCAGTTAGCCTTCTCCTCAGGTTAATTCGCCGTCGGAAGG
GGACAGTTCGTGGTAGGATGACTGCATTTACTCTGGCCGCAATTGCAGTG
ATGCACAGTAGTCAGCACTACATTCTCGCATTGACTTGCAATGGTGTTGA
AGACCAACACCAGGTCAGAGTTGTATCCGCGTCTCTATCTAGAGCTGTTG
AAGAAGGATTGAAGTTTTGGGTCTGGTATGAGAGGCATCTGGTTAAATTC
AGCCCAGTTTTAAGGGAGGTTGCATCGATATCTTCATTGGTTTGCCGACA
GGCCAAGGTGGTGCAATGGTCATCAAATACTATGTTGAGTTGGCCATCTG
TGACTTCCCTTAGGAGGTTGAATGTCTATGTTGCTGGTTTATAGACCGAG
CATACACTGGTTTCCATGAGATCAATGGACATGACTTCAATATTGTTCCT
ATGAGACAGGGAACTTACCAACAGTCTGTTCGTGACGTACAAGGATGGCA
CTTCCATAGTAGCCATGTGGTCTCTCCACGATGAGGGTTATACCATTGAT
GCTTGGGCATATATTTGTAAATATGACACGCACTAGTAGATCACGCAAAC
TACCTGTCGCCCTGTCGCCATCTTCTTCCTATTCGAATCGGTTGTATTAA
CATTAAAAGTGCTCTCCACTTATATGCTGACCTGAGTCGTTAATTCAGTT
TCCCAACAGGGGTTGTGACAGCAATGGGTGTTCAGACATCCAGCAGTCCT
TCTCACCTCACCTCACCTCACCTAGTCCCATCCTCATCTTTTGGGTCGGG
GAACATGGTCGCTTTCAGCATGAGCTTTCTCCATCCTTCCCTGTCCTTCG
CCCTCTGGGTACATTCTGCAAATGACCTTCCTGTCCACTCCTTTATGTCA
TCTCCCCATCTCCTGCGTGGCCTCCCTCGGCTTCTGTTGCCAAAGATCTT
CCTTTGCAGTATGTGGGTTGAGTTGTTCTGCGCTCGAGTGACATGTCCAA
AGCACTGCAGCTTCCTTCTCTTTACCATGTTCAATAGTGTCCTTTGAATC
CCCAGATCTTCTAGCACTGAGTGTCCTTAGCATGGAGTGTCCATGCTTCG
CAGCCATATATCACCACGGGCCAGACCAGGGCTTTCTGCACCCTCAGCTT
GGTAGAGATCTGCAGTGCCCTGTCCTTCCAGATGGTCTCCAGGGAACTAA
GGGCGGTCCGCGCTGCTCCTAGTCGTGCACTGATCTCACGACTGCTTCCA
GCTGTTTCATCGATAATGGCGCCCAGATACTTAAAGATTGGTACCTGCTC
CAGCAGGACCCCATGGCAGTAGATCTTCAGTACTTTCGGTTGTTTGTTGT
TGCCATGACCTTGGTCTTCTTGGTGCTGATCTCCAGACTGTATTCCATGG
ATACAGTATTTTCAAGATTCAGCAGCTCCTGAAGTCTCTCCGGTGAGGTC
GCAATCAGGCCGATGTCATCTGCGAACCTTAAGTCGTTAATGGTCCTCCC
ACTGATGTTGACACCAATCCATGAGAGTTCNCAATTAGGCCGATGTCATC
TGCGAACCTTAAGTCGTTAATGGTCCTCCCACTGATGTTGACACCAATCC
ATGAGAGTTCTCCTGCAGACTCTCTCATCACTGCCTCAGAGTAGAAGTTA
AAATAGATAGGTGAGACAAGAAATCCCTGTCGCATGCCTTTCGTGACTTT
AAACCAGTCGGTCAGCTCCTCCTCCACTCTTACTGCTGCCTGTTGGTGTA
CAGCTGGCGTAGTGAGTTGACAATGCAGTTGGAGACTCCCATTGTCTCCT
TTACTTTCCAGAAAGTTTTGTGCCTAACAGAGTCAAAAGCTTTTTGTAGT
CAATGAATGCCATATAAAGATTAACATTACTCTCGCTTGCTTTCTCCATA
AGAATCCTGACATTGGAGATTTTGACTTTCTTCCTGAACCCCATCTGTTC
CTCAGCAAATTCTGTGTCTGCCACCCCCTCCATAAGCTTCAGCAGAATGT
GCAGTAGGATCTTGCTAGCATGGGCTGACTTGACTTGGTAGCATGGGCTA
TCAGGGCTCTGGTACGGTGCTCTGAGCAGTAGGTGGTTCCAGTCTTTTTG
GGAATGGTGAACCGTACCCAGTCTGTGGGCCATCCTCCAGTCTTAAGGAT
CTTGTTGCAGAGGCAGCACAGGACCTTTGTTATCGCTGGGTTGTCGGTTT
TCAGAAGTTCGCCTGGCAGGTCGTCTACACCAGCTGCCTTGTTCTTCGGT
AGGCGTTTGATGGCATGCTCCACTTCAGATTCTAGGATTTCTGGAAAGGG
AGCGTCTCTTGCCTCTTCACTAGGTGTGTCCTGCTCGTCGTCAGGATCTG
AGTGTGGCGTGTTATCTTTCGAAAGCTGCTCAGGGTACTGTTTCCACCGC
TGTAGGATGCTCTGGAGGTCAGTGAGAACTCTGTTGTCCTTGCTCTTAAT
GTTCCTCTGATTGGGTTGGAAACCTCTCCTCAGCTTCTTGATGATGCTGT
ATGACTTCCTGAGTGAGCTGTTTCCTCCAAGACCCTGCTCCATCTCTGCA
CACTGCTCTTCCAACCTCATTGCTTTATCTTTCCTTGCCTCCCTTTGAAC
TTGCTTGTCCACTTCTCTATAAAGCAGTTCACTGCTCTCTGTGTTGTATT
GCATCTTCAACTTACTCCTTACGTCTATAAGGTCAAGCGTATCTTGTAAT
ATCCATGGATGGTTTGGCTTCCTAGGGGCCTTTCCCAGAAGCTTCTCTGC
TGCCGCTTTGATGGCCTCTGCTAATGCCGCTGAGAACTCATCCGGTGTTT
TTTTTTTCTTCCTGCAGTAGGTTTAGAGCCTCAAACCTGTTGTGGACTTC
TATGCTGTAAATTTCCCGTACTGTTTGTGACTCCAGTGCTTCTCGGCTAA
GGCTGGTTCTCCGTTTACTCCTACCGCACTTCTTGATCTTGAGTCAGGTT
TGCCCCCACCGTGTTGTGGTCTGATCCACAGTCCGGCCCGGGATAAGAAC
GGCAGTTGGTGACAAACTTCCTCTATCTCTTGCTTATGAGAATGTAGTCG
ATCTGGTTCCCATACCTGCCCCCTGGGGACAGCCATGTGTAGCGCCTCCT
CTCACGGTGCTTGAAGGCTGTGTTGGTGATGAACAGTCCATTGTCTCGAC
AGAATTCCACCAGCCGTTCTCCTCGCTCGTTGGAGGTCCCTAGGCCATAG
GGTCCACAGACAAAGTTTCTTCGAGCCTGTCTGCGCCTACTTTTTTTTAA
ATAGTCTTCATTAAGATTTTCCAACACCATAATAGACGAATACATGTATA
CATAATAGAAACGTAAAAACCAGGAGACATTTGCTAACACTAGATTATAC
TAACAACTAATTGTATAAAGATCCCCACTTAAACAGGTGTTTATCATTTT
TTTCCAGAATTATAAGCAGTTATATATTCCACTTTGTGGTAATGCTTTGC
ATAGGCACTGTATCCATCAAACGTAGCTAATTTTACATGTCTGTTTTTAA
ATATTAGCAACTAGCAATTAGAAACAATGTATTGATAGCAATAGAACAAT
TAACAGAAGTACCTAATATGATCATTCTAGGTGTAAGTATGACTGATGCA
TTGACATGGTTTTGTATCCATTTTTTTACATCTCCCAAAAACGTTACGAG
TGAAGAACAATGGTGAAAAATATGCTGAGGAGTTTCCTCCTCGCTGTTAC
AATAAAAACAAAGTGAATCGTCGGATAAGTTCCATCTGTACAGCTTATTT
CTTAAAGCGAGAAAGTTGTGTACTAATAATATTGAAATGCTCTTAGATAG
GAATCAATTGTTGTTGTGTAGATTAAACTGTAGACCAAATCCCATTGTAT
CTGTTCATTGAAGATATCCATCCAGTATTCTTTGGCTTTAC Coding sequence (CDS) from alignment at Sc0000647:54272..58212+ >transcript:BL62851_cuf0 ID=transcript:BL62851_cuf0|Name=transcript:BL62851_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=324bp|location=Sequence derived from alignment at Sc0000647:54272..58212+ (Branchiostoma lanceolatum)
ATGGGTGTTCAGACATCCAGCAGTCCTTCTCACCTCACCTCACCTCACCT
AGTCCCATCCTCATCTTTTGGGTCGGGGAACATGGTCGCTTTCAGCATGA
GCTTTCTCCATCCTTCCCTGTCCTTCGCCCTCTGGGTACATTCTGCAAAT
GACCTTCCTGTCCACTCCTTTATGTCATCTCCCCATCTCCTGCGTGGCCT
CCCTCGGCTTCTGTTGCCAAAGATCTTCCTTTGCAGTATGTGGGTTGAGT
TGTTCTGCGCTCGAGTGACATGTCCAAAGCACTGCAGCTTCCTTCTCTTT
ACCATGTTCAATAGTGTCCTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000647 | genome | Sc0000647:54272..58212 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL62851_cuf0 |
| Biotype | protein_coding |
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