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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL63877_cuf0 >transcript:BL63877_cuf0-protein ID=transcript:BL63877_cuf0-protein|Name=transcript:BL63877_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=295bp
VMVTFHQLGPYGSTSCLVYSYFVSMLTSVSIANLAAISIDRYIAIIKPLN
YQGIMSMRNTRICIIFAWVFSICICFPILIGWGTSTYDMEAFQCEVQSWA
TDIYFTIFIICILYLPASIIMCFTYYHIFKICRHHSKEIGKVRELETRFQ
SESDHYPTSYTTKAKHQTNSRGESMYRKGSSRESQETPNCESQSRSHHER
RAAMMLFTVITAFYVSWLPYTIVRVVQSGIGMKLNPIVRFGLSWLGISNS
FFNCIIYSISNSAFRQGLKNLVISACNKCTRRGNDPFNLTAVPKV Run BLAST on NCBI mRNA from alignment at Sc0000198:100233..103536- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL63877_cuf0 ID=transcript:BL63877_cuf0|Name=transcript:BL63877_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3304bp|location=Sequence derived from alignment at Sc0000198:100233..103536- (Branchiostoma lanceolatum)
CGGTGATGGTCACCTTCCACCAGCTGGGCCCGTACGGCTCCACCTCCTGC
CTTGTCTACAGCTACTTTGTGTCCATGCTGACCAGCGTCTCCATCGCCAA
CCTTGCAGCCATCAGCATTGACCGGTACATCGCCATCATCAAGCCCCTCA
ACTACCAGGGCATCATGTCCATGCGCAACACTCGCATCTGCATCATCTTC
GCATGGGTCTTCTCCATCTGCATCTGCTTCCCCATCCTGATCGGCTGGGG
CACCAGCACCTACGACATGGAGGCCTTCCAGTGCGAGGTGCAGTCGTGGG
CCACCGACATATACTTCACCATATTCATCATCTGCATCTTGTACCTGCCT
GCCTCCATCATCATGTGCTTCACGTACTACCACATCTTCAAGATATGCCG
CCACCACTCCAAGGAGATCGGGAAGGTCCGGGAGCTCGAGACGCGCTTCC
AGAGCGAAAGCGACCACTACCCGACGTCCTACACCACCAAGGCCAAGCAC
CAGACCAACTCCCGCGGAGAGTCCATGTACCGCAAGGGATCCAGTCGCGA
GTCGCAGGAAACCCCAAACTGCGAGTCCCAGTCTCGCAGCCACCACGAGC
GCAGAGCCGCAATGATGCTCTTCACGGTCATCACTGCTTTCTACGTCTCG
TGGCTGCCGTACACGATCGTGCGTGTCGTGCAGTCGGGCATCGGGATGAA
ACTGAACCCCATCGTCCGGTTCGGCTTGTCGTGGCTCGGGATCAGTAACA
GCTTCTTCAACTGCATCATCTACAGCATATCGAACAGTGCCTTTCGACAA
GGTTTGAAGAATCTCGTGATCAGCGCGTGTAATAAGTGCACTCGACGCGG
AAATGACCCGTTCAATCTCACAGCAGTGCCAAAAGTGTAGAATGGGGAAA
GCTCTACCAGAAGGTATTCCACAGCATTTGTACTTTGACCACTATTACGA
TGCACCTATCACTGTACTTTCCAACAAACCAGATGTTTTCACAGTTTGTC
TTGCGTAGTATTTCATTCTTCAATTTTCACACCTTTGTCACTCCAAAAGT
GCCTCAGTGTACTCAGTTGGTTGGGGTACTTACAGCTCGGTAACCATGTC
TGCAAATAATTGGTCTGACTGACACGTCTGTGGAGAGGCCTTTAATGCCA
GCTGGCAGCAAGTAATTGCCCCTTGTTTGACTCAAATTCATTCAACCAAG
AGACAAATTTACAGGATTCTCTCACGGAAAAATTTCATCCCAAAATTAAG
TTTTGATGTCCAAGGAATTATGTTTTCTAATCTCCAACAAGTATCTATTC
ATCAGATCTGCGGAGTGGCATTTGTACCCAGACATGATTCTGATGCCTTT
TCTTTAGCGCATGCCTACACCTCTGAACATAGTGATCCAAATCTATGATA
TTGTATGGCTGTGTTAGCTGGTATACCCTGTATTTCCTTGAATAACAGCC
CACTGCTAGCTACATTTTGTACTTGACAAAGGAGAGATGTGCAAGATGTT
GATATGTAAATACATGCACATCAAAGTCAAGCAATTATCAGAATAGAAAG
AAGCATTAAGTCACTAAACATCAGGCTTGTTATGATGGGAAATGTAGGGC
TGTTGCAGACGTCAGTGATAGGTGCATGTAGTCATAAAGGGCTGACAAAT
TGCTGTAGAGAATGTCAGAGATTTATAACATGTACAAAAGGCTGTACAGT
GCATATAGACCTGTAATACATATCCTGGATCAATGTGAAAATGTGTAAAA
ATCACAGTTTTGTGCAATAAAGATAAGAGAGACTGTTCTGTATTTGTAAT
AAAGAGTCCTGTAAAGTATATTATGTGATCTGAATCCATTTGCAGAATGG
TTCAGACTGAATGTTGCCAGAATACAGAATGAATCTGTTGTACTTTGATG
TAACCAGAGTTTTATAAATATCCGCCTTTAAAAATGTGTCTGTGTGTTGA
AAAATAGATCTTGCTAAATGCAAGATTGAACTGTGCTTTGTCTCAAATTG
AAGACAACTGCAGTATATTCCATAATGCTTTATTTGTTTGTTTGTTGATT
GTCTTGGTATAGTTTACTGTATGGATGCAAGTAAAAGTATGGTATGTTGC
AATGTTAGTGCCTGCTTTATATTACATGAAGTAAAATGAATATATCAATG
TTGAAGGGAAAAGGATTCAAAATAACACTGTGGAATATTCAATATATTCA
CTGATAGACGTTTGCTGTTCAGTATCATTGTGGTCTTTTGTCTGTTGAAA
GTGATTTCTGCGATAGTTGTATTGTCATATCATGTATATTAAGCCTTGAA
ACTTGTTCTATAGTGTGTAAAAGTGACCTAGCTTTGTATCTGTTTCACTT
CTATTTGATGTGAAGTAAAGAGCCATGTCTTGATTTGAGAAACACCATGA
ATAGCAGCAGCAAAAGCATGGATTTTTCATAATTACGTGAAAACGACAGA
TAACTGGATTTCTCAACCTACATGTGAGATGGTTGATTTTGTAAAAAGTA
TGGCTGTTCTTTCCTCTTTCAAATTGATAGATTACAAAGTGACACCAGTA
TAATCAGAATAGTCACCATTAAACTGCAAAATTTAAAATGTGTTTTAGTC
TCACGTAAGGAGCTTAAAAGCTTCCAACCCAAAGTACAGCTCAACCTCAT
GTAATATCTATCGTGACTGCCAGCATTCTCAGGAGCCAGAAGCAGGACAT
TTAACTGGCCAGAAAACTGTACTAGTTCCCTTAGACTTTTGACTCAAAAT
GACCACCCATTTACAAATGATCTAAGTTTCTCTTCCATCAAAATCTGGTC
TGGGAATTTTGTCGGGCAGGCCTAGGGCCTAGATAATCTGACCTGTACTT
TATATCAACCCTGTAGTCTTTGGAAGAATGTGATCCTACTATATTATTGA
TGTTGGTATTATGTAATTGATTTAGAGAATAACCAGTCAGCAATGCTCAA
TAACACTGTGAAAGGAACTGTATATTTACTGACTTACTATTGTCCAGTGC
AGATGTTGTTTTTATTGTTGCAGTATCAATATTGTTCTGAAATGTGATGA
AGTGCAATATCTGTGGAATACAAATCCAATTTAAAGAAGCAGAAAGACAA
GTACAATCAACTGACAGAAGTGAAATAAACATATCTCTGTTAATCTATAA
GCAACATATTGAACATGGAATAAAATATATTATCTTTTGAGTGTTGGCAA
ATTTGGTATGTAAGAGCATTTGTGACTTACTTAACTGGACTTGTCAGTAG
CAAATGATGTTAAGATTTTGTCTGGAAAAAAAAAGAAAATACACCATATC
ATTG Coding sequence (CDS) from alignment at Sc0000198:100233..103536- >transcript:BL63877_cuf0 ID=transcript:BL63877_cuf0|Name=transcript:BL63877_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=888bp|location=Sequence derived from alignment at Sc0000198:100233..103536- (Branchiostoma lanceolatum)
GTGATGGTCACCTTCCACCAGCTGGGCCCGTACGGCTCCACCTCCTGCCT
TGTCTACAGCTACTTTGTGTCCATGCTGACCAGCGTCTCCATCGCCAACC
TTGCAGCCATCAGCATTGACCGGTACATCGCCATCATCAAGCCCCTCAAC
TACCAGGGCATCATGTCCATGCGCAACACTCGCATCTGCATCATCTTCGC
ATGGGTCTTCTCCATCTGCATCTGCTTCCCCATCCTGATCGGCTGGGGCA
CCAGCACCTACGACATGGAGGCCTTCCAGTGCGAGGTGCAGTCGTGGGCC
ACCGACATATACTTCACCATATTCATCATCTGCATCTTGTACCTGCCTGC
CTCCATCATCATGTGCTTCACGTACTACCACATCTTCAAGATATGCCGCC
ACCACTCCAAGGAGATCGGGAAGGTCCGGGAGCTCGAGACGCGCTTCCAG
AGCGAAAGCGACCACTACCCGACGTCCTACACCACCAAGGCCAAGCACCA
GACCAACTCCCGCGGAGAGTCCATGTACCGCAAGGGATCCAGTCGCGAGT
CGCAGGAAACCCCAAACTGCGAGTCCCAGTCTCGCAGCCACCACGAGCGC
AGAGCCGCAATGATGCTCTTCACGGTCATCACTGCTTTCTACGTCTCGTG
GCTGCCGTACACGATCGTGCGTGTCGTGCAGTCGGGCATCGGGATGAAAC
TGAACCCCATCGTCCGGTTCGGCTTGTCGTGGCTCGGGATCAGTAACAGC
TTCTTCAACTGCATCATCTACAGCATATCGAACAGTGCCTTTCGACAAGG
TTTGAAGAATCTCGTGATCAGCGCGTGTAATAAGTGCACTCGACGCGGAA
ATGACCCGTTCAATCTCACAGCAGTGCCAAAAGTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000198 | genome | Sc0000198:100233..103536 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL63877_cuf0 |
| Biotype | protein_coding |
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