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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL63948_cuf0 >transcript:BL63948_cuf0-protein ID=transcript:BL63948_cuf0-protein|Name=transcript:BL63948_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=504bp
LSDGKATGLDQVDNNLLKLAADHIARPLCYIINLSLTTSVYPTAWKRAKV
VPLAKSATARLSGPNSRPISLLPAFSKVMEKVVSSQISDYFQGNALMTPY
QHAYRKHHSTGTALLQLVDDWYCKIDQGNIVGVIFLDFSAAFDLVDHSHL
LQKLICYGFSDTAVGWMGSYLAGRKQCVHFNGTNSTFREIQCGVPQGSCL
GPLLFTIFTNDLPLTVTETTPAMYADDTSAYACAPSVDTVTVKLQTDMNN
ICEWVRLNKLFLNAKKTKCMLIGSKPKMSKKPELTLSADGSPIQQVTTMK
LLGSTLDQCLTWDLHIKEMTKKMARSLGAIRRSAAYLDQSLLKLLTETLT
LTHLDYCTAVWTSTTQKNINALQVMQNKAAKLILGSNRISVREMNCALSW
QTVTERLFTNNMCSFHKILFFKQPSTLHSKLHLVSDQHTYSTRSSTRNDF
KLPKPKTTSATKSFLYRCSKSYNALPYHIRTSVPSTFKIHIRDRVNMDTN
IMIR Run BLAST on NCBI mRNA from alignment at Sc0000255:95039..96730+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL63948_cuf0 ID=transcript:BL63948_cuf0|Name=transcript:BL63948_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1692bp|location=Sequence derived from alignment at Sc0000255:95039..96730+ (Branchiostoma lanceolatum)
TTTGTCGGATGGGAAAGCTACTGGTCTAGACCAAGTCGACAACAATCTGT
TAAAGTTAGCTGCCGACCATATTGCAAGACCACTGTGCTACATTATAAAC
TTATCGCTTACTACCTCTGTATATCCGACGGCATGGAAAAGAGCCAAGGT
TGTTCCTTTAGCCAAGTCGGCAACGGCTCGTTTAAGCGGACCGAACAGCA
GGCCAATTAGTCTCCTGCCTGCTTTTAGCAAAGTAATGGAGAAAGTTGTT
AGTTCTCAAATATCGGACTATTTCCAAGGGAACGCCCTGATGACACCTTA
CCAGCACGCCTACAGAAAGCATCACTCCACTGGGACTGCACTCTTGCAAC
TAGTTGATGACTGGTATTGTAAAATCGACCAGGGGAACATCGTCGGGGTC
ATCTTTCTGGATTTCTCCGCTGCTTTTGACTTGGTGGACCACAGCCATTT
GTTACAAAAACTGATTTGCTACGGGTTCTCAGATACAGCGGTTGGTTGGA
TGGGCAGCTACTTGGCAGGGAGAAAACAGTGTGTACACTTCAACGGCACG
AATTCAACCTTCAGGGAGATACAGTGTGGCGTTCCCCAAGGGAGTTGCCT
TGGTCCTTTGTTGTTTACGATCTTTACCAACGACTTGCCACTTACCGTGA
CGGAGACCACCCCCGCCATGTACGCAGACGATACATCAGCATATGCGTGT
GCGCCATCAGTTGATACAGTTACGGTTAAGTTACAGACAGATATGAATAA
CATATGTGAATGGGTGCGTTTGAACAAACTCTTCTTGAATGCAAAAAAGA
CCAAGTGTATGCTGATTGGGAGTAAACCAAAAATGTCAAAGAAACCTGAA
CTCACCTTATCTGCTGACGGGAGCCCAATACAGCAGGTTACAACTATGAA
GCTACTTGGGAGTACATTGGATCAATGTCTTACATGGGACCTCCACATAA
AAGAAATGACGAAGAAAATGGCTCGATCCTTGGGTGCCATCAGAAGAAGT
GCGGCATATTTGGACCAGTCGTTGTTGAAATTGTTGACGGAAACACTCAC
CTTGACACACTTGGACTACTGCACAGCGGTTTGGACTTCTACCACACAAA
AAAACATCAATGCTCTACAAGTGATGCAGAATAAGGCGGCAAAACTTATT
CTGGGATCTAACCGAATATCAGTCAGGGAAATGAATTGTGCGTTATCATG
GCAGACTGTGACCGAAAGACTTTTCACCAATAACATGTGCAGTTTCCATA
AGATACTCTTCTTCAAACAACCATCCACTCTCCACAGTAAACTACACCTC
GTTTCCGACCAACATACTTACAGCACAAGATCTTCAACAAGGAACGATTT
CAAACTGCCAAAACCTAAAACGACATCCGCAACAAAGTCTTTTCTCTACC
GGTGCTCAAAATCATACAACGCTCTTCCATATCATATCAGAACATCTGTA
CCATCCACATTCAAAATACACATCAGAGACAGAGTAAACATGGACACAAA
CATTATGATACGGTAGCAATTTGAAATGTGAAATTGATGTAAATATGTAC
ATATCATGTGATGTTATGTTATGTGTATGTGTCCCAATGTAATCTGTATG
TTCAACATGATGTGACTCCAGGAAGAATAGTGTAGTACACTCGTGTACTC
ACTAATGGAGTCCTTTTACCAATAAACCAATAAACAATAAAC Coding sequence (CDS) from alignment at Sc0000255:95039..96730+ >transcript:BL63948_cuf0 ID=transcript:BL63948_cuf0|Name=transcript:BL63948_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1515bp|location=Sequence derived from alignment at Sc0000255:95039..96730+ (Branchiostoma lanceolatum)
TTGTCGGATGGGAAAGCTACTGGTCTAGACCAAGTCGACAACAATCTGTT
AAAGTTAGCTGCCGACCATATTGCAAGACCACTGTGCTACATTATAAACT
TATCGCTTACTACCTCTGTATATCCGACGGCATGGAAAAGAGCCAAGGTT
GTTCCTTTAGCCAAGTCGGCAACGGCTCGTTTAAGCGGACCGAACAGCAG
GCCAATTAGTCTCCTGCCTGCTTTTAGCAAAGTAATGGAGAAAGTTGTTA
GTTCTCAAATATCGGACTATTTCCAAGGGAACGCCCTGATGACACCTTAC
CAGCACGCCTACAGAAAGCATCACTCCACTGGGACTGCACTCTTGCAACT
AGTTGATGACTGGTATTGTAAAATCGACCAGGGGAACATCGTCGGGGTCA
TCTTTCTGGATTTCTCCGCTGCTTTTGACTTGGTGGACCACAGCCATTTG
TTACAAAAACTGATTTGCTACGGGTTCTCAGATACAGCGGTTGGTTGGAT
GGGCAGCTACTTGGCAGGGAGAAAACAGTGTGTACACTTCAACGGCACGA
ATTCAACCTTCAGGGAGATACAGTGTGGCGTTCCCCAAGGGAGTTGCCTT
GGTCCTTTGTTGTTTACGATCTTTACCAACGACTTGCCACTTACCGTGAC
GGAGACCACCCCCGCCATGTACGCAGACGATACATCAGCATATGCGTGTG
CGCCATCAGTTGATACAGTTACGGTTAAGTTACAGACAGATATGAATAAC
ATATGTGAATGGGTGCGTTTGAACAAACTCTTCTTGAATGCAAAAAAGAC
CAAGTGTATGCTGATTGGGAGTAAACCAAAAATGTCAAAGAAACCTGAAC
TCACCTTATCTGCTGACGGGAGCCCAATACAGCAGGTTACAACTATGAAG
CTACTTGGGAGTACATTGGATCAATGTCTTACATGGGACCTCCACATAAA
AGAAATGACGAAGAAAATGGCTCGATCCTTGGGTGCCATCAGAAGAAGTG
CGGCATATTTGGACCAGTCGTTGTTGAAATTGTTGACGGAAACACTCACC
TTGACACACTTGGACTACTGCACAGCGGTTTGGACTTCTACCACACAAAA
AAACATCAATGCTCTACAAGTGATGCAGAATAAGGCGGCAAAACTTATTC
TGGGATCTAACCGAATATCAGTCAGGGAAATGAATTGTGCGTTATCATGG
CAGACTGTGACCGAAAGACTTTTCACCAATAACATGTGCAGTTTCCATAA
GATACTCTTCTTCAAACAACCATCCACTCTCCACAGTAAACTACACCTCG
TTTCCGACCAACATACTTACAGCACAAGATCTTCAACAAGGAACGATTTC
AAACTGCCAAAACCTAAAACGACATCCGCAACAAAGTCTTTTCTCTACCG
GTGCTCAAAATCATACAACGCTCTTCCATATCATATCAGAACATCTGTAC
CATCCACATTCAAAATACACATCAGAGACAGAGTAAACATGGACACAAAC
ATTATGATACGGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000255 | genome | Sc0000255:95039..96730 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL63948_cuf0 |
| Biotype | protein_coding |
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