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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL64143_cuf0 >transcript:BL64143_cuf0-protein ID=transcript:BL64143_cuf0-protein|Name=transcript:BL64143_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=227bp
MQEFLAARYMAVFHSCSQTKMQELISTIDASLEYKTLLQFLCGFNEQTAI
VVFQQVCKLYNHFLKGYREAHYEGTVVGETARTYSDYMIMCLLSLRESQS
RYIVAKVMSPVFHSINLSLCASCRLSAALKYLLQVAGNDVRQLKICFLNP
GDDAAANYVTSLLSRSFPRLQLDVRLFDCQVGADRMGILAVRLRSAPCLQ
TLYLEGTHLDDEAAEALAHALFYVPLL Run BLAST on NCBI mRNA from alignment at Sc0000096:7597..11130- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL64143_cuf0 ID=transcript:BL64143_cuf0|Name=transcript:BL64143_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3534bp|location=Sequence derived from alignment at Sc0000096:7597..11130- (Branchiostoma lanceolatum)
GTTGAATAAAGCCACGCCTACAAATTTCGCGTACAGCAACACCAACTTAC
AGGGCATATTTTTTATACCACCGTCATAATTTTCGTAGTCACTGCAAACA
GTCATCTTCGGCACAAGGTAACGTTAACCAATGTGTTCTCTTTTTTGACA
GTGTTACTCCAACTGTGACGTTACATTTGAACAACTTATGAACATGCGTA
GTTGGTAATTGAGCATTACATGTTTGGCTCGAGTCTGGCCAGTATAATAA
CAGCCAAACCACAATGGAATATTCTACAGTCGCTAGTCTATATGGGTAAG
CAGTTACACACGGTATACCAGCAACAAGAGATACTAGAAATTCTATGTAT
GATCTCAAGGTTGGTCCGTTCATTGATGCTAATCTATCCCAAGGTTAATA
GTTAATAGATAAAGTCGCCGCCTTGCGAAATAGCTGTTATCTGCAATCAC
TTGACAATCATTGATTGAGAGTAGGGGTGGGTACCGATACAGTGTACCGG
TCCCAAACCGGTCCAAAAAAACCGGTTCGGAAAAATCAGTGGACCGGCCT
ATGGAACGTTTAGAAAATTCACTGTACCAGGCTACCAGCAGGTGGTTACA
TAACCGGTCTAAGAAAATACAAAACAGCAGATTTAACGAGTCGTGGTTGC
TCTTTTTCGAAAACGTTATATGTGAATCCTACCTAGCAACACTTAAAGGA
TGAGTCAACAGACGGCGAGGAGGGTATAGTTGATTTTGGGACAAAATGCG
AACCTAAGAAATTATATCGTTCCAGACATGGCCTTAGTTGACACATGCAT
ACACTTTTACTCAATTAAATTTACACTCGAAATAAAGACACTCAAACAAA
CCACAAATCAGTTACTCGATATTTGTGCTTCTTGTGTGCCAATAGTTTAC
TTGCTTTTTGTTTCTTCAAGGCCTATGATAAGCTACATGTAGCAAATACT
GAAAGCTGTTAAGCGTCTAACATATTGATTATTTGCTGGTCATAATGTTT
ATAGTTGTTGTCTAAGAAGGACAATATTGCTCTGAATCTTTTTGTGAGAT
AAAAGTTACGTTGAATACAGGGTTGCATGTTTTGGTACATCTTCGTTTTC
TTTTTGCACATTAGTATGCACCGATAATTCTAATATACAATTTGAACATA
ACTTGTAGGACTCACATAGACCTTTACTTGTATCTCGCTCTCCAAAATAT
GGTGTACTGAGACGCTACTATAATCAGGTACAGGTACAGGTCCGGGTCCG
GACCTGAATGTTCTGTACCGGTACCCACCCCTAATTGAGAGCAAACATTT
AGACTCTATCGTTAAACATAGTATCATAAGCGCAAGAATGTTCCATTCTC
GAGATTTAGGGAGTTACCAGGATAGACTGCTTTGTTTACAAGCCTTCAGG
GTAGGTCAAGAAGACTTCAGCTTCCCTCCTCATTTTACTTCAATTTTCTT
CGCCCAGTTAAATATCGTCTTCAGTCCACTCCTCTTAATTAGAAAAGATC
CTCCCTAGAATCTTAAACCTAACGCGTTTCTACTATTCTGGGCTGTAGGA
ATGTAGGTGCCAGGTACACAGTTTGCCAGACGAGACCAAAGCAGTGTGGG
GAACACAGAACGAGGCCCTCCGATCAATTCGACTCACAGCTTGGGTGGAA
AACTGGACGTTTACAGGAAACGTTTGTCTAAATTTTACACATCCAGCCTG
AATCACATCAAGCCTCTCGTCTGGAGTGAAAAGTTTTCTCTTGATCTGTC
TGATATACATGTACTTTTAGAGTTTGAAGGAGTCCCAATAACGCAGGGAG
GTGAGGATGAGGGTGAGAAACGACGATCTTTGTCTTCCATCTTTGAGTTG
TAAAAAAGCACAGAAATCACCGCGATATGTATTGGTAGAGGGTCCATTAG
GGTCTGGGAAATCTACCTTGCTAGCATCAATTGCCGTAAATTGGGGACTG
AACCAGAGAAATTGGACTGAAAGGTTCGATTATGTTTTCCTTATACGTCT
CCGGGAGGTAGAGGATGGAGAATCTATGGAAGACATAATTCTGGACCAGT
GTTTGCCGTCAGAAGATGAGGACATTCACCGAGAGGTCATTGACCACCTG
TTACACAAGAGTAAAGCTAAAATCCTGTTCGTGCTCGACGGATACGATAC
ATGCAGGGTGCAAGAAGAAGAATGGGACTATTCCTAAGTTGCTCTCCGGA
AAGATTTTCAAGAAGACTCATATACTCGTCTCATCGCTGCCCTCTAGTGG
AATAGAGGAGAAAGCGCACAGGAGTCATTTTGATGTGAGTGAGGTGACGC
CCGATGTCCGAGACATTGACTTTTTGATGAGGTTAGGAGGGGTATCAAGA
GTACCCCCGCTTCAAAACGCCATCCTCGAGAACAGATTATTTTTAATCAC
AAAACCATGCAAGAGTTCCTCGCGGCCAGGTACATGGCGGTCTTCCATAG
CTGTTCACAGACCAAAATGCAAGAGCTGATTTCCACCATTGACGCTTCGC
TGGAATACAAAACTTTACTTCAGTTTCTGTGCGGTTTTAACGAGCAGACT
GCCATCGTGGTATTCCAGCAAGTATGCAAACTGTACAATCATTTCCTCAA
AGGCTATAGAGAAGCCCATTATGAAGGTACCGTTGTCGGTGAAACAGCAA
GAACCTACAGTGACTACATGATTATGTGCCTGCTCTCTTTGCGTGAGAGT
CAATCCCGGTATATCGTTGCCAAGGTGATGTCTCCAGTATTTCACTCGAT
CAATCTCAGCCTCTGCGCCTCCTGCCGACTTAGTGCGGCACTGAAGTATC
TGCTCCAAGTCGCAGGCAATGACGTTAGGCAGCTGAAGATCTGTTTCCTG
AATCCTGGGGACGACGCTGCCGCCAACTACGTGACGTCATTACTGTCGCG
CTCTTTCCCTCGTCTTCAGCTTGATGTCCGACTGTTCGACTGTCAAGTCG
GGGCGGACAGGATGGGCATTTTGGCTGTGAGACTCAGAAGCGCCCCCTGT
CTGCAGACGTTGTACCTGGAGGGCACGCATCTTGACGACGAAGCCGCTGA
AGCACTTGCGCATGCGCTGTTTTATGTCCCTCTACTATAAGAGTTGGAAC
TATCAAACAATCAAAACGGTGACCCAGGAATGACAGCTATCTCCAAAGAA
ATTCACAACGTACCAAATTTGACATTCTTTGGTATAAATGACAACGACAT
CGGAGATGCGTCCATCGTTGCCATGTCAACCAGACTGAAACACCTTCCTG
CTCTCCGGGAGCTACGTCTTGGCGGGAACAGCCTCTCAGCGTCAGGCATC
AGGACGTTCTTCGCGGTCATTTCGAACATGCGGAACTTGGACACATTGGA
CTTATCGTCGTCCAGTAAAGACCCCGCCAGAATGGACGCAAAGACAGTGG
CCTCTTTAGTCCAGGCCTTTCCAAGACTCACGGCACTTGTTATACTCAAG
TTACAAAACTTAGCCATGAAGAAAGCTCAACTTGAGAAGATCATGAAGGC
TGTCGAGGAACATACCAAACTTCACAAGATCTGG Coding sequence (CDS) from alignment at Sc0000096:7597..11130- >transcript:BL64143_cuf0 ID=transcript:BL64143_cuf0|Name=transcript:BL64143_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=684bp|location=Sequence derived from alignment at Sc0000096:7597..11130- (Branchiostoma lanceolatum)
ATGCAAGAGTTCCTCGCGGCCAGGTACATGGCGGTCTTCCATAGCTGTTC
ACAGACCAAAATGCAAGAGCTGATTTCCACCATTGACGCTTCGCTGGAAT
ACAAAACTTTACTTCAGTTTCTGTGCGGTTTTAACGAGCAGACTGCCATC
GTGGTATTCCAGCAAGTATGCAAACTGTACAATCATTTCCTCAAAGGCTA
TAGAGAAGCCCATTATGAAGGTACCGTTGTCGGTGAAACAGCAAGAACCT
ACAGTGACTACATGATTATGTGCCTGCTCTCTTTGCGTGAGAGTCAATCC
CGGTATATCGTTGCCAAGGTGATGTCTCCAGTATTTCACTCGATCAATCT
CAGCCTCTGCGCCTCCTGCCGACTTAGTGCGGCACTGAAGTATCTGCTCC
AAGTCGCAGGCAATGACGTTAGGCAGCTGAAGATCTGTTTCCTGAATCCT
GGGGACGACGCTGCCGCCAACTACGTGACGTCATTACTGTCGCGCTCTTT
CCCTCGTCTTCAGCTTGATGTCCGACTGTTCGACTGTCAAGTCGGGGCGG
ACAGGATGGGCATTTTGGCTGTGAGACTCAGAAGCGCCCCCTGTCTGCAG
ACGTTGTACCTGGAGGGCACGCATCTTGACGACGAAGCCGCTGAAGCACT
TGCGCATGCGCTGTTTTATGTCCCTCTACTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000096 | genome | Sc0000096:7597..11130 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL64143_cuf0 |
| Biotype | protein_coding |
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