transcript:BL64229_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL64229_cuf0
Unique Nametranscript:BL64229_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL64229_cuf0

>transcript:BL64229_cuf0-protein ID=transcript:BL64229_cuf0-protein|Name=transcript:BL64229_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=114bp
HVFHHAHVLSLSSCVSPCTCSLPLIMCFTMHMFSPSHHVFHHAHVLSLSS
CVSPCTCSLPLIMCFTMHMFSPSHCAALLSCHVSVMYFVREQLGLVSWVA
ILQIHNFLLLHAIF
Run BLAST on NCBI

mRNA from alignment at Sc0000031:160761..161225+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL64229_cuf0 ID=transcript:BL64229_cuf0|Name=transcript:BL64229_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=465bp|location=Sequence derived from alignment at Sc0000031:160761..161225+ (Branchiostoma lanceolatum)
TTCATGTGTTTCACCATGCACATGTTCTCTCCCTCTCATCATGTGTTTCA
CCATGCACATGTTCTCTCCCTCTCATCATGTGTTTCACCATGCACATGTT
CTCTCCCTCTCATCATGTGTTTCACCATGCACATGTTCTCTCCCTCTCAT
CATGTGTTTCACCATGCACATGTTCTCTCCCTCTCATTATGTGTTTCACC
ATGCACATGTTCTCTCCCTCTCATTGTGCTGCACTTCTCTCATGCCACGT
TTCTGTCATGTATTTTGTGCGGGAACAGCTCGGCCTCGTAAGTTGGGTGG
CTATCCTTCAAATCCACAACTTTCTGTTGCTCCATGCCATCTTCTAGTCT
AGTTATGTCAGTCTGATCACTCGTACATTGGAAACACTCTAGTCTGGCAG
CATAGAACTTTGGCATCTACATTATGTAAATCTCTGACAAACTTTAAACA
CAGGTGACATTACCT

Coding sequence (CDS) from alignment at Sc0000031:160761..161225+

>transcript:BL64229_cuf0 ID=transcript:BL64229_cuf0|Name=transcript:BL64229_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=345bp|location=Sequence derived from alignment at Sc0000031:160761..161225+ (Branchiostoma lanceolatum)
CATGTGTTTCACCATGCACATGTTCTCTCCCTCTCATCATGTGTTTCACC
ATGCACATGTTCTCTCCCTCTCATCATGTGTTTCACCATGCACATGTTCT
CTCCCTCTCATCATGTGTTTCACCATGCACATGTTCTCTCCCTCTCATCA
TGTGTTTCACCATGCACATGTTCTCTCCCTCTCATTATGTGTTTCACCAT
GCACATGTTCTCTCCCTCTCATTGTGCTGCACTTCTCTCATGCCACGTTT
CTGTCATGTATTTTGTGCGGGAACAGCTCGGCCTCGTAAGTTGGGTGGCT
ATCCTTCAAATCCACAACTTTCTGTTGCTCCATGCCATCTTCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL64229gene:BL64229Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL64229_cuf0-E1BL64229_cuf0-E1-1564476830-177757Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL64229_cuf0transcript:BL64229_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000031genomeSc0000031:160761..161225 +
Properties
Property NameValue
Transcript idBL64229_cuf0
Biotypeprotein_coding