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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL64733_cuf4 >transcript:BL64733_cuf4-protein ID=transcript:BL64733_cuf4-protein|Name=transcript:BL64733_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=126bp
MKKCRRKYKVEDEILTASPVFESTKTPKIVSWIDRNPTRGQLVNNVFLCA
ALEDVEKRFRDTTLVIGANTDEVFLKARLEPGHGICHATGCPGDGVEQGV
DLFQTLLSKEAQPEAPAPNARHDMVF Run BLAST on NCBI mRNA from alignment at Sc0000257:207504..214010+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL64733_cuf4 ID=transcript:BL64733_cuf4|Name=transcript:BL64733_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=6507bp|location=Sequence derived from alignment at Sc0000257:207504..214010+ (Branchiostoma lanceolatum)
ATGTAATGCTATTATAATGAGGTACAAGTCTGCCTGCGCCACCATGCGGA
CGCGTGGGTACACTGCAGGTTTTGAACTGACTCTACCGATTTCAACCAAT
CATAGACCGCAATTTTAGTCACGAGGTCCCTTCATTCTGGTGGAAGGGGC
AGCCATCTTTCTTAGCTTCCGTTCGGAGCTGTTTACTCGCGTTTCCGGCC
AAAAATTTCTGAAATCGGCGGGTTTGAAAGTGCGGGGTCGGTATGAAGAA
GTGCCGAAGGAAGTACAAAGTTGAGGATGAGATTTTGACGGCTTCCCCTG
TTTTTGAATCTACGAAAACACCGAAAATAGTCAGTTGGATCGATCGTAAT
CCGACTAGGGGGCAGCTTGTCAACAATGTATTTTTGTGTGCAGCGCTGGA
GGACGTGGAAAAAAGGTAGGTTTTCCCGATTTTTCGGCCATATTGCCTAA
TTTGCATAATCCTTATACTGTATTTTGCCCCATAATACTGCAATATTTTG
CCTTAGATCAAAATTAGCTTGTGAATTTACGTCAGAAGAAGTTGTTTTGG
TCGATTAGAAGGCCAAGTGTTGTTAAAACGCTATCGTTCACCCCATAGCA
GTATCGCCCCCCTCCCCCCCAGTAAAATTCAATGCACAGGTTGAAGATAA
ACTTTACAATTTTCTGAGATCAAATACTCTGTTCCTGTATATTTTGTCCA
TTAAGATGGAGTTTAATAGTCTGTTTTAGTTGTATTTATATTTTAACTTC
AGTTTGATATACTGTCATATATATGCATGTCTGTGCAAATATATATCAGA
ATAACAGAACATATAAGACACATGATTTTATACAATTGCATTTTTTAAAC
ACTCAGTCAGACCTCACGTGTCCCTATGTGATACAAAAGGATAATCATGG
AGTTAGAATATAAGTAACAGTACTACTAGTCTAGTATTTTACATTGTCAT
GGTATTTCCTTCTCTTAAACAATGTAGTTGGTTAGGTCTCAAAGATAATG
TCCTTGTATACAAATTACAATTGTGGAAATATTATATAATGCTTACATTT
CACTTAGTCTTTATGGCACTTTGGCTATGCTGATAATTATTAATATGATT
AAATTATCAAATGTGCTGTTTCTTGTACAGTATTGTCTACTACCAGATCT
GTATACAATGTACAAAAAGTTTTTATCAAATGATAATATAATAGTAGTTA
ACATTTAGTCTTTCTTTTTCCTTGGGACAGGTTCAGGGACACCACCCTTG
TGATCGGGGCTAACACCGATGAGGTGTTCCTTAAGGCTAGACTTGAGCCT
GGCCACGGGATCTGCCACGCCACAGGTTGTCCTGGAGATGGAGTTGAACA
AGGCGTGGACTTGTTCCAGACCCTGCTCTCCAAGGAAGCCCAGCCCGAAG
CCCCAGCGCCGAATGCACGGCACGACATGGTCTTCTAACATGTGCATCTT
TACAGGTACCGTACCGTTTGGCACACGTTCACGGTAGAATGCCATGAATG
ATGTGATAGCACGGGCTGGAAAAACAATAGTAATACATGTCAATGTTTGA
AGATTACTGTGTTATAAATGAACTAAGCTGAATTCAATCATATGTTAATG
AACATGTAGAATTTGAGTAGAACCTTACCCAGCTCATTGACTGCCTCCTC
ATTCATGGGTTCACTTCTGGAGTATCGCTTATGACATTGTGCAAACAGTG
TGAAAAGCTGTTTGTACTTCTCAGCGGTTGCTGTTACCAATGGCATAAGT
GATATTGGTAGATTATCGGAATTTCCCATGATGCTGTTGATGGTGGTTTT
CACAGCAGAGGTAAGGCCTTCTATGGCATCATCCTGTGAAAATGAACAAA
ACATCACCCCAGGAGATTAGACATTATGTCATTGTCAACTAATTTAGATA
TAACTACAGGTTTGTCATGCCTAAAAACAAGAGCAAGGATGTATGAAATT
ATAATATACTTGCCTTTAGCATTCTGTGCACATGGTTTCCAATGAACGAG
TTGCTGTGGTAGGCCTGCCTCCGTACCCGGTACTTATTAAGCACAATGTC
GAGTTCTGATGTCAACGGACCCTGCCCGATCTTCACAGAGGTCCGTTTTC
TGATGTTCTCGGCCTTTTCCCTCTGCATGGAGACGTAATAATGAACATGT
CAGTTAGACATTGAGTGATTACTGGACCAGACTTATATAATACACACACT
CTAATTTTCCCTCTTACATGTAGAGTGAAGACCCTGCTCACATAGGAACC
CCAGCCCATAGCTTAAGTCAAAATTATGGCAGGGTGTACTTACCAAAGTT
TCCTTCCTCTGAGTCAGGTCCTCGATCATGCTGCAGGCCTCAGTGAAGAT
TTCCTCGGCCATAGAGTCATCCGCACCATCGCTGTAGGCCAGCCAAGCCA
GCTTGTTGCATTCCTGTTCTTCGATCTCCTCTTCCAGGGCCTCTGCCTGG
TGGTCGAAAGCCCGGGCTTCATCAATGGCATCAAGGTAACCTTTAAACCT
TGCCAAGTGCTGATCGGAGAGGATTTCCTCCCTTGTTGCCTCACCTTCCT
TGAAGGCATTAGCTGTGCAGGACTGGATTTTTAGATCAATGTCCTGCAAC
TCGGCCTCAAAAAGGTTGAAAAGTTTCAGGTAGACACCTAGACTAATGTG
CAGGCCAGGTATCACTACCTGTGAAAAAATATATAGGACAGTTAGTTTGA
TTGTGTGCTATGCCCATGGCAGGGAATAGATGTTATTATGTTATTATAGT
AAATTAAATATCTAATGATTAACTTGCCTGTTCTATGGGCACTGCATACA
TCACTGGGCAAACTGCATTGTTGTAGTGTTTGGCGTCCTTCAGTTTGCCC
TTGCCAACAGTGATGAACTTGCGGTGATCTTCCGCGAGGCTCTCCAGGGT
CCTGGGAGGGATGTGCAAACGCCTGTCGTCTTTGTCTTTCAGCTCATCCA
GCTTTATGTGGCACCACAAACAAGGGTGGGAGCCTGTGGTAGATGTGAAA
CAAGACAAACTTAGAGGCAAAATCTAGTAACCGTTGCTTAGTGATAGGTA
GACATAGTTAAGTGACGAATATGTTGAATTGAGTAATCAAAAGGTACTTA
CCACAAGCACCAGACAACCCGTACCAGAGACACAGGTACGCATAATCCCC
TGCTCCAAACACCCTTAGCTGGAACTCCTTCCCATCTTTGTTCCTGCAAA
AGGATTTTTAGGAATTGAGCTTGTAAGATTCAACTTAGTTTTGTACATTT
GAAAGAAAAATTGTCTTGTGTCTGTCAAAATCAAATCAGAACTATGATTC
AACTTACCTCCACTTTGAAACTTGAAGGTCCTTCAGTTCCTGAGCATACC
GGCCGGTTGCAAGTGTAAGGTTTTCTCTGGTGTCTTTTGCATCAAAAATG
CAAAAGACAGTGGTGTTCGTCTGTGAGTTTGGGGACGTTTTGTTCAGGAT
CTGAAAGGCCATTTTAAATGTCCCCCCGCCGTGATCCCCCCCAACCTTGA
TCCAGATCTCCCCCTCTGGTATGGTCTTGTCATGCCAGATAAGGCTGCTG
TAATTGTAAAGGAGAAAAATATATGTCAGAAAGTTTAGACGGTCGACCCT
GTTACAGCTTTAATCTCACCTTATTCAGTGATTGTTGAAATGAAAAGGAC
AGTTCCTTACTTTGCTGTATTGCTCCTCTCCAGGTAGTCGTAGATGGCAT
CTCTGAGGGAGGTCACATATGCACAGGGCAGGAGCTTCACTGTGGATTCT
TTGTCTCCCTTGACAGAAAATGGTAGGTTTTCTGCCTCCACTTTGAATCC
AGAAAGCATCTCTGCTGCAAGCTTCCTTGATATGGCCTCACTCTCCATCT
TGACCCCATACTGTTTCAGCCACCTTATACAAAATAGTTACATGGTTTTA
GGTAATATATGCATGTGTTGGATTTTTAAAAAGTGTAGCAAACAAAGCTA
AAAAAAACAAAATGTTCTCAATGCCAACAATATACCTTTTAAGTTTTCTT
AGTTGGCTCCAGTTCATGCCCATGCCCACTTTTGCCGCCAGCAGGTGCCC
ATGTGGGACAACGATCTTGTCAAGCTCCAACTCCTGCAGCAATCGCTGAA
GCTCGTGACGAGGATGAAGCTGGAGCTCGGCCTTCAGCAGAGATGCGGAA
TCATTACCACTGGCCTTGTCCCTCACACCCTGCATCAACTTGGCTTGTTT
TCTTTGAGTGGAGGGTGTTGTCTCACTAGATCTCTTCCTAGGCTTTGGTA
TATGAACTAGATTTAAGGGCTAGAAAATGAAAAAAAAAGTGTTGCTATCA
AGATGTTCAAAGGAAAGGCGGTTTTTCTTATTACATACGACAACTATGCA
ATGTATTTAACTAAGTTACAAATGTACGTCAACTGATGACAATGTATGTT
CATGTGCTGTTTGTTTTGCTGTTTTCTTAAATGTACATAAAATTTATTTA
TGCACATCTTTGTTTAGTGATGTAGTCTCTGTAGTAAAAGATAAAAGTTT
CTGATTGTCATGTTGAATATAAGAATTGAGATGAGAAACATGAAATGTCT
GCTTCATACCTGTCCTCCAGTTTTGACCTGCACGCTCCTTTTGTCAGGAG
CCTCTGCCATTTTCCGGCGAACAAAAGAGGTCAAAACATCCTCCTGGTCT
GCGGTTAATGGACCTTCGTCATTAAGGTTGACGGTGACCTTACCATAACT
TGTGGAAGGCATAGTATGGCTAGATGTAGAAGCTATAGGGGTGTTGGTAG
AAGCTGAAGATGGTATGGTGTGGGGAGGTGTTTGAACTATGCTGTTATTG
GAAATGGGGGGGTTAGCTGGTAAAAGGGGCCCTTGAGTTGCAGTAGGGGG
CACAACAATGATAACCTTGACAGGTTGTGCGCTAGTAACCGAAGGGGGAG
GGGGGTCCTCTGTGGTTTCCTGTTTTGAGGTGCAATCAGTGTGGTGTTTA
AGTTGCTCTAACCTCAGTTGAGTAGTACAGTTTTTGCAAGAAAATGTTAA
CTGGGTGTAACACGACAGCCAGTTTCTATAGACTGGTTTTACCTGACTTG
GTGTTACCTGTGTTTTACACATTGAACAGTCAATGCTATTGGTATTTGCC
AGCTGAAACGACTTACTGATGCACTCAAAACAGAAAATATGACCGCATGG
TGTTTCCACAGGTAGGTACAGGAAGGACTGGCAGATACCACATTTGTATG
CATTAAGGTTACAAATGGGCTCAAATCTATTCTCATCAAACGGATGGTCC
TCCAGCATGTCAGGCAATGTATTGAATATCTCTTTTGATACATTTCCATG
ACTAGTACTTGGCTCTTGTTCAACCTTGTCCCCCTTTTCAGCTGTCTGCA
TCTTTGGTCTTCCAGGCTTTCGTTTTTTTTTGGGTCTACCCCCCTTGGCC
AGTGACAAAACTTTTTCACAGTGCATACAAGCTTGGCCAAAGTTGTGCTT
GTACCATGACACACGTGTTGGGGGGTGTACTGTAGGTGGTTTGTACAATT
TCATCCGGCATCGCTGACAGAAGGATGGGGGATGCTGGTAACTCCTGTCT
CGATGCACATCAACCCGCCAAACCTTAGAGATTTCTTGAGCATATTCAAT
ACAAGGGAAGGGTTTGTTGTTTTTCTCTTTGTCATCCTTTTTCAGGACAG
ACTCTCCACAGAACCGACAAAGCTTTGATAAATTTTGGATATGATCTAAT
AGCCCTAGGTTTGCAGACATGCTGGAAGGTTGAATAAGAACAACAACATC
TATAGAAAATACCAAAATACACACAGAAAGTAATATGACTATGCCTTGTG
AACAGCCATGTGGTGAGTGGGTGGGGTGGGGGGTGCTGGGTGTCAGCATT
TACTCTATGTGACCAGAATATAGAAAATTTATACAGAAAAAAACGCCCGA
GTTGGCCTGTATTACTGCCAATAATATTATGTTTGCATATAAACACTGTT
TTATACTGTTTTCTGCAGTTTAATGATATTTTAAGACCAATTTGAGGTGT
AACCTACATACTGGACACTCAGATCATTGCAACCCACGTGTTAGAAGCAG
GCATTTTCGATGACGGATGGGAGGAAAAGGAAATGTACAGGGTTGAAAGG
AACTATGGCAGTAAGCAGGAATAAGTATGAGATTGATAAGAAATAGAAAG
GTTACCGTGTAGAAACTGGATAAAAAGGTGAAAAGATGAGTTAAAAAGAG
TGAAGTAAGCCTTATGCCGTTGGTATGCCAGTCAGGCGGTGACCCCAATA
TCTGTGAGTAAGCTAGTGATATCCCCAAAGGTGCACACATGTTTCACAGG
CAAGAGGTTAAATTCTTAAAAGACAGCTGATTTGGGCTTGATTAATGGCC
CAAACCTCCCCAAAGACCCTAGTTACACACAGTAAATACTGGTTGCTAAG
TACTAGGTAACAAGATCTCGCAGTATCACGCAGTGTAATCTCGCGAGGGT
ATTCTCGCGCAGGCGCACACTAAGAAACCAGATACAGGACCAATTAAGCT
GCGGTGG Coding sequence (CDS) from alignment at Sc0000257:207504..214010+ >transcript:BL64733_cuf4 ID=transcript:BL64733_cuf4|Name=transcript:BL64733_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=762bp|location=Sequence derived from alignment at Sc0000257:207504..214010+ (Branchiostoma lanceolatum)
ATGAAGAAGTGCCGAAGGAAGTACAAAGTTGAGGATGAGATTTTGACGGC
TTCCCCTGTTTTTGAATCTACGAAAACACCGAAAATAGTCAGTTGGATCG
ATCGTAATCCGACTAGGGGGCAGCTTGTCAACAATGTATTTTTGTGTGCA
GCGCTGGAGGACGTGGAAAAAAGGTTCAGGGACACCACCCTTGTGATCGG
GGCTAACACCGATGAGGTGTTCCTTAAGGCTAGACTTGAGCCTGGCCACG
GGATCTGCCACGCCACAGGTTGTCCTGGAGATGGAGTTGAACAAGGCGTG
GACTTGTTCCAGACCCTGCTCTCCAAGGAAGCCCAGCCCGAAGCCCCAGC
GCCGAATGCACGGCACGACATGGTCTTCTAAATGAAGAAGTGCCGAAGGA
AGTACAAAGTTGAGGATGAGATTTTGACGGCTTCCCCTGTTTTTGAATCT
ACGAAAACACCGAAAATAGTCAGTTGGATCGATCGTAATCCGACTAGGGG
GCAGCTTGTCAACAATGTATTTTTGTGTGCAGCGCTGGAGGACGTGGAAA
AAAGGTTCAGGGACACCACCCTTGTGATCGGGGCTAACACCGATGAGGTG
TTCCTTAAGGCTAGACTTGAGCCTGGCCACGGGATCTGCCACGCCACAGG
TTGTCCTGGAGATGGAGTTGAACAAGGCGTGGACTTGTTCCAGACCCTGC
TCTCCAAGGAAGCCCAGCCCGAAGCCCCAGCGCCGAATGCACGGCACGAC
ATGGTCTTCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000257 | genome | Sc0000257:207504..214010 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL64733_cuf4 |
| Biotype | protein_coding |
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