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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL64773_cuf0 >transcript:BL64773_cuf0-protein ID=transcript:BL64773_cuf0-protein|Name=transcript:BL64773_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=129bp
MLELLWTNFKFLQIYTTLIRPVLEYGSPVWGGLPRGLSDEVEKVQKTCCR
IIGIPSDQLPTLEKRRREASVREFGRVVADETHPCRHFLVKSGDTKYDLR
QTSAYKVPLSRTKRHEQSFFPITLKLMQQ Run BLAST on NCBI mRNA from alignment at Sc0000023:608134..611798+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL64773_cuf0 ID=transcript:BL64773_cuf0|Name=transcript:BL64773_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3665bp|location=Sequence derived from alignment at Sc0000023:608134..611798+ (Branchiostoma lanceolatum)
CTTCCCACGGTGCTCGGGGAGGTCGGGTATACACCGGAAACATGTCGGAA
ATACATAGTCACGATTATCTGGGAATGTATCGGGAAACGTTAACAGTTGT
CCTCCAGATTTTACACTTGTCGGAGCACCATCGGTGTTCCATCGGTCGAT
GTACATTTCCCGACATACACACGGTAATTTTTCGATGGTCTCAAAATTCC
TGATAAGAAACCCATGTTTTTCCGACAAATTTGTCGGTAATACGTCGTTT
CTTTTTCCCACAGACTTCCGATGCCGGTCGTCAAGGCAACAAGTTACAAA
CACGGCGGAGGGGACTCCCCGGCTTGGATGAAACCATGGCAACGGCGTTG
ATTGACGGGTAGCCGCGGTAATGGTTACCATGGACACTGCATGATTGACA
GCGGAAAGACAAGCACGTGGTCGTCGCGGCATGCAGCTTAATAAAAAGGA
AACTTCAGACGATAATCGATCAGCTGTTCTCCAGCACCATATTTGACATT
TACGGATGTTAAATTTTATTGTTTAGTTATAAGACTTAGTTTGTACGTAG
TTTGTAGTAGAACGTGTGGAACTCGCTGTACTGTTTGTTGTGTCAGTAAA
TTAAGCTTTTATTACAACCGGCAAAAAATAAAATATTGAAAGGAACGATA
TTTCCGTAGAAGTCTGTAATCGGCAAGTATGAGAAGCATAGTTAAGATAT
TATAATCGAGGAAACATCGATAAATTCTTAATAACCAAGGAAATTCATGT
CAAAGGACGCGGAAGCATAAACCCGGGATTGAACCTGCAACTCGCGGCGC
CGTACGGCAGCCATTTGTTCGCAAACGCAAGCGGCGTATCGCGGTGAGCT
AAATATTGCGGCGAGGTAACAATACCTTCAAACCACTTCAGTACAAACGG
CCCATCACGTGGGGTTCCGCAGCTGCAGTCCGTAATGAATACACTTGCAT
TGTTCTACGGTCGAACGTTACGTGTTTCTGTCACTCATTTCGTTTCATTA
ATAAATATTAGTTGGTCGTCGTTCGCTAACAAAGTGATAATATAAAGAAT
TGACGCGATTTCATTTTAACAGACGACAAGTGCCCATATCATATACGTAA
AATAACGAGTGTGATTGTAACCAGCGCTGATAGCTCACCTGGTAGTGTTG
TTGTCCATCAATCCGAAGCAGGCAATATGTGTAGGTTCGAGCCCAACGAC
CCATTTTTATGTTTTATTTTTCTCTGTTACAGTCAACATTACTTTAATTT
ATTCTTTATCTTTCATCATCTTATGTTTATATTATCATGTTAAAAATTTT
GTTATTCTTTATTTTTTAAAATCAATCTCTGCTCCTTGATGAAGGTCTCT
GGGTGTTGTCTTTGCACTTCTACTTGTTGACACGTCGTTTTGTTCTGACG
GCGTCTTTGCCAACGCTAACAAAGCACGTGAGCCATCATCAGATATCTTT
CCTAGCCTGGTTGGGACACTGGAAAAGAAAACAAAAATTGGTTGTTACTT
ACAATTGGAAACAATGGCGATGCATTTTTATTGAAACTAGAAAACATCCC
AACAGTTTGTGAACAAACGTTCTTTTTTAATTGTTCGTGGAGCCGTCAAC
TTCTAATGGCCCAAATCGCTGTACTTCGCGCGGGGAGAAGCGTTGATTTT
TGCGCTACGTAGTGTTTGGTTGAACTGTGGCAAGGATCAGAAGTAAAACT
GGGAGGAATATTTCAATATTCCATAATCATATTCGTTACATGAAAATAAA
TTGACAATATAATTCCGAATCCCGTAGTCACTAGTCAAGTCGCAGCATGT
TTTGAACGTTACAAATAAAGTCGCTTATCCAGTGCGAGATTCAAGTAATG
GAATGTTTCATAAAANTGAACGTTACAAATAAAGTCGCTTATCCAGTGCG
AGATTCAGTAAAAGTAATGGAATGTTTGATAAAACCTCATTGATATGACC
ATCATTACACCCCGGTTACCATCTAGGAGTACTAATACTTTTCTTCTCAG
TAGTCATTCGTTTCTCAGTAGTCCTTCGTTTGCCGTCGGTGACAAGAAAT
TTATACGGGCAAGACGAAAGTTACGGATGCTGGACAACTGAGTTGCATCG
ACAAAGTTCGTTATCTCTCTTAATGTTTGCAACTTTCATTTCGTAGTTTG
ATTGTATTTCCTGATTTATTTCAGCAATTTACATTATCATATTATTTCAG
TATTTCTTCTGTTGTTCACATACAGCGTACTAAATTACAGTGGTCCGGAA
AAATGCAGCCGATGGTGGTTAATCCGTCTCGATGCTTGAACTCCTGTGGA
CCAACTTCAAGTTCCTTCAGATCTACACAACATTAATTCGACCTGTGTTA
GAGTACGGCTCACCGGTGTGGGGAGGACTACCTCGTGGGCTGTCTGACGA
GGTCGAGAAGGTACAGAAAACCTGCTGCAGGATTATTGGAATCCCCTCCG
ACCAGCTGCCAACCCTGGAGAAGCGGAGACGCGAGGCATCCGTGCGTGAG
TTCGGTAGGGTGGTGGCGGACGAAACACACCCCTGCCGGCACTTCCTTGT
GAAATCCGGAGACACTAAGTACGATCTAAGACAAACTTCAGCCTACAAAG
TACCGTTGAGCCGTACGAAGAGGCATGAACAGTCCTTCTTCCCCATAACT
CTAAAATTGATGCAACAATGAGCCAAAAGGTTACATTGATTGCCATGATC
TCTATATCTGTTAATGTTTTAGCTTAGTATTTGCACGATGATCGCCAACA
ACATTTAATATATCTAATGTGACTATGGTAAGCGTGCTTTTAACAGATTT
TACATATCTATTGTGACCATGTCAAGTGTGATTACTGTTATTTTGTTAAT
AGAATATAATTTGTGAACATTTTATGTGAGTTCATGTTAGCTTTCCGAAC
TTGTTAGTTCCGGGGAACGTCAGGTGTTAGTGTTAATGACATGAAACAAA
CAGTTGGAAAAAACCAACACCGGAGCAAACAAACAAACAAACAAACAAAC
AAACAGATGAATACGAAAGCAAACTGAACGGGAACAAAACGAATAAATTA
ATGAACAATTGTCTTTTTATTAAAATGAATCGATGTGTCCGGAAAGTCCG
TCCCCATCCTCAAGCACGGCCGGTATAACTGGCCCGCCGGTTGTCACGAA
TCTGAAAAGACAAATATGGAATGCATGAGATGTAGCTATAAACAGCATAA
TGTAGTCAACTATCCACGAATAACAATAGCGGCGGAGTTTTGAAAAAAAA
GACCCCAAACAAACAAACAAACAAACAAAATCATCTACCAACACGGTAAT
AATTCAATGACCTGGTTTGCCTTTTGACGAAAATATATCAATGAAAATAC
ACGGTAATTAGAAAACTATGGAAAAAAATGTCTAACTCGTCCGACGAGAT
ATTGCTACAATATCGTAATAATCGGGACCTGACACCCATCATGACCGCGA
GTGACCCTTTGCGTGAAAACCGATACATGCCCGACATTCGTCGGTAATAT
ATAGGAAGGTTATCGGGAAAGCAAGGGGCGAACTCCATTGATTTAGCCTG
ATTTTTGGATCTGTATCGGGTTCAACATCGGTAAAAGCTGCAGGGAAAAA
CCGACACAAATCTGGTATTATTCCGTTACCAACACGACGTATATCCGACC
TCCCCGAGCACAGTG Coding sequence (CDS) from alignment at Sc0000023:608134..611798+ >transcript:BL64773_cuf0 ID=transcript:BL64773_cuf0|Name=transcript:BL64773_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=390bp|location=Sequence derived from alignment at Sc0000023:608134..611798+ (Branchiostoma lanceolatum)
ATGCTTGAACTCCTGTGGACCAACTTCAAGTTCCTTCAGATCTACACAAC
ATTAATTCGACCTGTGTTAGAGTACGGCTCACCGGTGTGGGGAGGACTAC
CTCGTGGGCTGTCTGACGAGGTCGAGAAGGTACAGAAAACCTGCTGCAGG
ATTATTGGAATCCCCTCCGACCAGCTGCCAACCCTGGAGAAGCGGAGACG
CGAGGCATCCGTGCGTGAGTTCGGTAGGGTGGTGGCGGACGAAACACACC
CCTGCCGGCACTTCCTTGTGAAATCCGGAGACACTAAGTACGATCTAAGA
CAAACTTCAGCCTACAAAGTACCGTTGAGCCGTACGAAGAGGCATGAACA
GTCCTTCTTCCCCATAACTCTAAAATTGATGCAACAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000023 | genome | Sc0000023:608134..611798 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL64773_cuf0 |
| Biotype | protein_coding |
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