transcript:BL64849_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL64849_cuf0
Unique Nametranscript:BL64849_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL64849_cuf0

>transcript:BL64849_cuf0-protein ID=transcript:BL64849_cuf0-protein|Name=transcript:BL64849_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=106bp
KYLYDVNSVEIRKAITQLRISSHRLNIETGRYFNVAPDQRFCPFCPNRIE
DEFHFIMECSKYDALRVELFTFLNSSTSDFKTLNATDRFDYIFRCNSSYS
VKIGKY
Run BLAST on NCBI

mRNA from alignment at Sc0000286:271823..272142+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL64849_cuf0 ID=transcript:BL64849_cuf0|Name=transcript:BL64849_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=320bp|location=Sequence derived from alignment at Sc0000286:271823..272142+ (Branchiostoma lanceolatum)
AAAATATCTTTATGATGTGAATAGTGTTGAAATCCGTAAAGCGATAACAC
AGTTAAGAATTAGTAGCCATAGATTGAATATAGAAACAGGTAGATACTTT
AATGTAGCTCCCGACCAAAGGTTTTGCCCATTCTGTCCTAATCGAATTGA
AGATGAGTTTCACTTTATTATGGAATGCTCTAAATATGATGCCCTACGAG
TTGAGTTATTCACCTTTCTCAATTCAAGTACTTCAGATTTTAAGACACTC
AATGCCACAGATAGATTTGACTATATATTTAGATGCAACAGCTCATACAG
TGTTAAAATAGGCAAATATA

Coding sequence (CDS) from alignment at Sc0000286:271823..272142+

>transcript:BL64849_cuf0 ID=transcript:BL64849_cuf0|Name=transcript:BL64849_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=318bp|location=Sequence derived from alignment at Sc0000286:271823..272142+ (Branchiostoma lanceolatum)
AAATATCTTTATGATGTGAATAGTGTTGAAATCCGTAAAGCGATAACACA
GTTAAGAATTAGTAGCCATAGATTGAATATAGAAACAGGTAGATACTTTA
ATGTAGCTCCCGACCAAAGGTTTTGCCCATTCTGTCCTAATCGAATTGAA
GATGAGTTTCACTTTATTATGGAATGCTCTAAATATGATGCCCTACGAGT
TGAGTTATTCACCTTTCTCAATTCAAGTACTTCAGATTTTAAGACACTCA
ATGCCACAGATAGATTTGACTATATATTTAGATGCAACAGCTCATACAGT
GTTAAAATAGGCAAATAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL64849gene:BL64849Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL64849_cuf0-E1BL64849_cuf0-E1-1564476830-423331Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL64849_cuf0transcript:BL64849_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000286genomeSc0000286:271823..272142 +
Properties
Property NameValue
Transcript idBL64849_cuf0
Biotypeprotein_coding