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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL65491_cuf2 >transcript:BL65491_cuf2-protein ID=transcript:BL65491_cuf2-protein|Name=transcript:BL65491_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=267bp
VNIHETTPFISDSTLREVQAQLLQVKPDKWQGVDVSVIRDVLADDELLNK
CTIPELKEILKTIKTFARGTVKMSVKKGQIILQIRAILTGLAVNFRKERL
RQPQTLKDLCMKTVKQCSVVPLAAAFASFVGRDSREEWEKTRPCSLLQIH
LEKDKYLTLDCFYCPPVSSRGFMQAFVVDPHHIRTNIRGSVLRDQVEGVD
LRALKNVAVSGRTPLTPVMITETLDMQSKSMCDILFSHAVAEELRRLGHS
TTAEFITLVRNKRLYIF Run BLAST on NCBI mRNA from alignment at Sc0000121:760875..761948- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL65491_cuf2 ID=transcript:BL65491_cuf2|Name=transcript:BL65491_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1074bp|location=Sequence derived from alignment at Sc0000121:760875..761948- (Branchiostoma lanceolatum)
CAGTCAACATACATGAGACTACACCTTTTATTAGTGACAGCACATTAAGA
GAAGTTCAAGCCCAGCTGCTACAAGTAAAGCCAGACAAATGGCAAGGGGT
GGATGTGTCTGTCATAAGAGATGTATTGGCCGATGATGAACTGCTCAACA
AATGCACCATTCCTGAACTGAAAGAAATCCTTAAGACCATCAAGACGTTT
GCACGCGGTACAGTGAAGATGTCGGTAAAAAAGGGCCAGATCATTCTACA
GATAAGAGCCATCCTAACAGGTCTTGCTGTCAATTTCAGAAAAGAAAGAT
TGAGGCAGCCTCAAACGCTCAAGGACCTGTGCATGAAAACTGTCAAGCAG
TGTAGTGTTGTACCTCTGGCTGCTGCCTTTGCAAGTTTTGTAGGAAGAGA
TAGCAGAGAAGAATGGGAGAAAACAAGACCATGTTCACTTCTTCAGATAC
ATCTTGAGAAGGACAAGTATCTAACACTCGACTGCTTCTACTGTCCACCT
GTGTCAAGCAGGGGTTTTATGCAGGCATTTGTTGTTGATCCCCACCACAT
CAGGACAAACATTAGAGGAAGTGTGCTAAGAGACCAAGTTGAAGGTGTAG
ATCTGAGGGCATTGAAGAATGTAGCTGTAAGTGGAAGAACACCATTAACA
CCTGTAATGATCACGGAAACACTGGACATGCAATCAAAGTCAATGTGCGA
CATCTTGTTTTCACATGCGGTTGCAGAGGAACTCAGACGACTGGGACATA
GTACTACTGCTGAGTTCATCACATTGGTGAGAAATAAAAGACTATACATA
TTTTGACACCAACAATTTATATGGTGTATTCCATAAATCTACAGAACATT
TTGGAATGTATAAATAGATACTTCTACGAGTTCTAGACTAAGTATACTTT
GCAATGTATCCTTTGAGATAGACACTGAGGCTTTCAGTAAGTGCACAGTT
TTGCTTCAGCGTTATGTAATCAATTTGAATTTTGATACATTTTTGTGTGG
TCTGAAGAATGTGGAAAACTGGAAAAAATACTAGACAGTCATGGTATTCT
TAGAAGGATAGAACACCTCAAGAC Coding sequence (CDS) from alignment at Sc0000121:760875..761948- >transcript:BL65491_cuf2 ID=transcript:BL65491_cuf2|Name=transcript:BL65491_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=804bp|location=Sequence derived from alignment at Sc0000121:760875..761948- (Branchiostoma lanceolatum)
GTCAACATACATGAGACTACACCTTTTATTAGTGACAGCACATTAAGAGA
AGTTCAAGCCCAGCTGCTACAAGTAAAGCCAGACAAATGGCAAGGGGTGG
ATGTGTCTGTCATAAGAGATGTATTGGCCGATGATGAACTGCTCAACAAA
TGCACCATTCCTGAACTGAAAGAAATCCTTAAGACCATCAAGACGTTTGC
ACGCGGTACAGTGAAGATGTCGGTAAAAAAGGGCCAGATCATTCTACAGA
TAAGAGCCATCCTAACAGGTCTTGCTGTCAATTTCAGAAAAGAAAGATTG
AGGCAGCCTCAAACGCTCAAGGACCTGTGCATGAAAACTGTCAAGCAGTG
TAGTGTTGTACCTCTGGCTGCTGCCTTTGCAAGTTTTGTAGGAAGAGATA
GCAGAGAAGAATGGGAGAAAACAAGACCATGTTCACTTCTTCAGATACAT
CTTGAGAAGGACAAGTATCTAACACTCGACTGCTTCTACTGTCCACCTGT
GTCAAGCAGGGGTTTTATGCAGGCATTTGTTGTTGATCCCCACCACATCA
GGACAAACATTAGAGGAAGTGTGCTAAGAGACCAAGTTGAAGGTGTAGAT
CTGAGGGCATTGAAGAATGTAGCTGTAAGTGGAAGAACACCATTAACACC
TGTAATGATCACGGAAACACTGGACATGCAATCAAAGTCAATGTGCGACA
TCTTGTTTTCACATGCGGTTGCAGAGGAACTCAGACGACTGGGACATAGT
ACTACTGCTGAGTTCATCACATTGGTGAGAAATAAAAGACTATACATATT
TTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000121 | genome | Sc0000121:760875..761948 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL65491_cuf2 |
| Biotype | protein_coding |
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