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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL65589_cuf7 >transcript:BL65589_cuf7-protein ID=transcript:BL65589_cuf7-protein|Name=transcript:BL65589_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=189bp
MQTSLAQNLPFIYFRSHHESLLLYRTVASWYSMVIITEYWEESLVLLKRK
FCWTMYDILHSTRRLHALKTRKEHVTLTDKQKDTHRKMSNIDYMMYDYFN
NTFWQRVTEEGPEFWEEVTYYKTLNHQVNQHCNSGGGKRVFPAGKWSQEF
VIDSTFCNDWKWAEGRWAAACWDVVYRRNKLSATQKSRP Run BLAST on NCBI mRNA from alignment at Sc0000007:6419326..6424986+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL65589_cuf7 ID=transcript:BL65589_cuf7|Name=transcript:BL65589_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=5661bp|location=Sequence derived from alignment at Sc0000007:6419326..6424986+ (Branchiostoma lanceolatum)
GGGATACATGTGTAGTTATAAAAATCGCGATACTGTTTCTTTTGACTTTC
CGGGGTGAATCCCCATCCTCTTGTATCAGCCATCCTCCAATCAGATACTC
CGCTTTCCGTTTTCAGAGGGATAGTAACCAGCCAATCACGTTGCCTCCTG
ACCGCACGATGCGACGTGATTGGCTGGTGACGACTGACCAGCGCTAACAC
AACGAGAAGGACAGATCGCAGGACTGTACGCCAGGGACGTTGCTTGATGC
AGACTAGCCTGGCACAGAACCTTCCATTCATCTATTTCCGTTCTCATCAC
GAGTCTTTGCTTTTGTACAGGACGGTTGCGAGCTGGTACTCCATGGTCAT
CATCACAGAATACTGGGAGGAATCCCTGGTGCTGTTAAAAAGGAAGTTTT
GCTGGACCATGTACGACATACTACACTCAACAAGGAGACTCCATGCTCTA
AAAACACGCAAAGAACATGTCACACTGACCGACAAACAGAAAGACACTCA
CAGAAAGATGAGCAACATCGATTATATGATGTACGACTACTTCAATCACA
CATTTTGGCAACGTGTAACCGAGGAAGGACCGGAGTTTTGGGAAGAGGTC
TCGTACTACAAGACCCTGAACCGTGAAGTGAACCAACATTGTACCTCAGT
CAGAGGGGAAAGGGTCTTTCCTGCTTCTAAATGGAGCCAGGAATTCATGA
TAAATTCAACTTTCTGTCACGAACTGCATGGATGGGGGGAAGGGAGATGG
GCAGTATCGTGTAGGGATGTGGTCAACAAACAAAACGAAGAGATGAAAAA
GAAACAAGCCCAGGTGTTAAATGATTCAGACACATAATTAAATGACGTCA
TGGTTTCTAAAATGACCTGGTTGGGTTAGATTATTCCATAATTGGTTGAA
ATGAGTCAGCTGGCTGTACCTTGCCACCACCCCTATAGTACTTGCTAGAT
TCCAACATGGCCGACCCATGATGTCACACACAGAAATGGCGGCGCCCATT
GATCAAAGGGTAAAACATTACAGGCTTCCTCTTTTTTTTTGCTTTGCAAA
AACTGTCATTTAAGTCATTTGTATCTGAGAAGTATACAAAGTAGAGGTGA
TCCAATATGTATATGCTACGCGTCGCTCTTATACCGTTTGGTATTTTGTC
TTTAGAAGTAAAGCATGGTACGCTATCTGTTTACAATAAAAGGATCTGCA
ACAGAGCAGAGACAGATAACACTGATGCACTTATCTATGTATCCAACACG
TTGCTGATTCCTCTCTATTGTTCTTTCTTGTCTCAAGAATCGAATACCTC
CATCCACAAACCTATGTTTCTTAGATGTTTCATCATGATTGATAAGAAAT
AAACAATAGACCTTTCATATCATTGCGTACAGTTACCTACTCTGAACTCG
GAATCGCGAAATAGGCACGATACTATCTCAGAGTTTTAAAACTGGATGTT
CGCATACAGGAAATAAGACAAACAATTATGCAAATCAGGTTCCCAAATTG
CATAATTTTCACTCATTGTGTACATCTCTGTCTAAGCTACCTGCAAATTA
AATAACACGAAAATCAGTCGTTCCTTCCTTCAGTTATTCTCCTTGGAAGA
TCAACACCAATGCAGTTCCAGTGTCACATACCGGGAGCCCAAAATCGACC
TTGGCCTGTGTACTCCTAACACCTAGTGGCTACGCGCATACCAAATATCA
TTACAATCCATCCAGACGTTCTTCAGTTATGCGGACTACAAGCATCCGGA
CACACACACAAAACAAACACGCAAACAGCCACACCGCCGCACTCAAAACA
ATATGTCCTTGAAAAAATCTCCAATTTTCATGGAGGTAACAAGGATGTGT
GGTATGACGTAAAGAACTACAAGGCCACAATATATGACTCATAGTCGGTA
AGCTATAAGATCAAGCATTTGAACATTGAGAAACATCTTTGAATTTAGCT
TTCTACTTTAAGGAATAAAGTACTAAATGTCTGAAGGCATCTTTTTTCGA
AACTGTTTAATTAGTGTGAACATTGTACCAATTATATTTTCTGATACATG
TATATCTAATTGTTTTGAAAAAATTGGAGTACTACCTCCTATAGCTCGGG
ATGGTACAATCCAAACAACTGTGATGATGTCATGAAATGAGATCTTGCCA
TCTTAATACGTCAGCGTACTTAGAATGCAACATGTTCATAATGGCGGGCG
AGTTCAGATCTCTTGGATTTTTCCTGAGTTGTCTGGCGATATTTTTGGCG
ATCAGTTTCCTGCGGGAACTCAAAGACACAACGACTGCGATGAAGCCGAT
GTTTCTTAATGCTACTCCTGACAACAAGTAAGATAGCTGTTTTTTTCTAA
CAGTACGAGTCTAAGAAATAGCACGTTGATTTATGGATTAAATACAGTCC
TATTTTAGATACCGATCTACGCTTGGTGGTGTATTCAAACAACATTAATC
GCAGTTAAGATGTATGATAAATTTGGATCTAAGACTTATTCGGATAGAAA
TGCAGTAGAATGGCTGCTACAGTAGAACACATTTATTTTCTGAGACGGTC
CCGCCATGTACACCCCGACCAATCGAATCACTTGAATCGCATTGAAACTC
AGATTCGTATCAGCCATTTCCCGACAAATCGCTTTCTAACTTGCGTTAAC
GACTACATCCGACCAAACCAACTCGCCAGTGAGATGGTGGAAGGTGTCAG
CTTCCAAAAGACGTTTTCAGATTGACAATTTTGGCACTTTGGAAGTAATT
GAATCCGTCCGCGATTTAACGGTTAGAGAAAAGTAGTAGAAACTAGAGGT
TAAATCGCGGGCGGATTCAATCACTTCCAAAGTGCCAAAATTGTCAATCT
GAAAACGCCTATTGGAAGCTGACACCTTCCACCATCTCACTGGCGAGTTT
GTTTGGTCAGATGTAGTCGTTAACGCAAGTTAGAAAGCGATTTGTCGGGA
AATGGCTGATACGAATCTGAGTTTCAATGCGATTCACGTGAATTCGATTG
GTCGGGGTGATCATAATGTCCTTGGGGTGACGTAGTATTCCATGCGTGAC
CTTTCCAGGTGATTAAATGGTGCCTCTGAAATGCATAATGACAAAGCTTC
GACAAGTCCGACTGCGTCGTATCATTTTCATAAGATTACGAAGTGATGTT
TACACTTTGAACTGGTGATTCGCTATGATGATATTTGTGTAGCATCATTG
AACCAAACAATACTTAGCAAGAAAACGCTTGGGACGCCATTTTGGCAATG
CGCCTCAAGTTAAATCACGTAGAAAATAGAGTAGACGGGCCAAGGCTGTC
ATCATGTTATGTATATTCGGCTGCACTCACGTGTGACCTCATGATGTCAA
CTAAAATCAAGTCGTCCAACAGGTACTGTATTTCAAACACTCCTGTAAAC
GTCTGTTGAAGGTCAGAGTTCACGGCTGTCGGGATGCATGTCGGGAATCT
CCCCGCACCACGGAGTAAAGTGTCAAACCTGGTTACAAGTGAGGCCACTT
GCCGTCCTGTCACCAATTTTGTCTTCGTCAAGGTAACTAAATAAGATTAA
AAAAAGCTGGGGCGACATGATGCTTAAAAGAGCTTGATTCATCAATTCAC
AAAAACTACGAATAATGTGAGTAGAGAACTACATATATGGAAAACATTCA
AGTTTGAATACTTCACTTGCAAAATAGCAAACCGCCTGTTTTGTGAAATA
GAGACATATTGAGCTGTTTTTCACGCGTTTGTGTGTGCTGTAACAAACAA
TGTACATGTATTGGGTTATAATGTCTGCGTTTGTATGCTTCGTGCTTCCT
ACATTCAGTAAGATAGTAACTGTTCATCATCAAGGTCATATATAGTTTAT
CATCGTTTCTCCTCTTAATGGCTTTGCCTGAAGGAAATACTAGTGCTGAA
TCGCCTTTTGTGTATCATCCATATACACTGCACTGATATTCCAGGTTCAT
AAGACAGCTTCAGGCTCCACGTTTATGTTACTGGCCAGGTTCGGCCGGAA
CCACGACATGACCATCTGCTATCCTGCACGTCGTAGCAAGGCCAAACACA
TACAGCTGTCATACCCAAGGTAATTTACTTATAGATATTATACAGCACGC
AATTGGGATTAAGGAATGATTCTGTAACCTGCTAGGGTCAGGTCAATGTC
ATTGTCAGTACTACATAATCATGGCTTTCAAAGAAATACTTGAAGATACT
AAGGTTCTTTCATTCCCTGGTCATCCTGGCAATTATATAAAGGTTTCTTG
GCAACCTGAAATATTCAAATTTCACTGTGACACACCCCTTGCCATGTTGA
CAGCGTGCTAGAGCAAGCTGACATTACCTCGTGTTAGATAGAAACGCCCT
ATACATCTATACACCAACCTACTTCTATGCATCCTTCAGCGGCAGATTGA
CAAAGAAAGACTGCAGGCCAGCCCTGGGAAGAAACTACACCCTCATCATA
CACCACTCAATCATGAACAAGCCCGCCATGGACCAAGTCATGGAACCGGG
GACCAAGTACATCGGCATCGTTCGAGAGCCGCTAAACCATTTTCGGTCCA
TCTTCTTTTGGCATCAGGTCGGTTTGCGGCGCAAGAAAAATCCGCTGGGG
GCGTTTCTAAGTACACCGAATAAGGACAAGGACCGTCAGCTTGGGAAACA
CCATCCGTACTCAAAACATCGAAATTTCCAGTCGTACACCTTGGGATTCC
CAGGAAAGCTGATGACCAGCAAAAACACAACCCAAATATACGAAATAATC
AGGTTGGTTGTAGCTGTCTTTGTCCTACCTTTTTTATGAAATTAATGAAT
TTCAATCCTTTTCACTTGCGAGTATTATATAGATTAATTATGACAATTTC
TACGTACTTAATGTGCGAATCATGACTAGCGGCATATGTAAGTTAGTTAG
AGGTAATATCATGAGAGTGATTTGATGCAGATTGGAGCATCGCCACATCT
GTATGATCCATGTAACAAAAGCCAAAATAAAACTAAAATAAGTCGAAGAT
AATAAACTACCATTATTATTGGCACGACTTCGCAAAAAAAAAATGAACAG
AAAAAGAGACTCATGTTTTTGTTTTTGTACAGGACCGTTGCGAGCTGGTA
CTCCATGGTCATCATCACAGAATACTGGGAGGAATCCCTGGTGCTGTTAA
AAAGGAAGTTTTGCTGGACCATGTACGACATACTACACACCACAAGGAGA
CTCCATGCTCTAAAAAAACGCAAAGAACACGCCCCTCTTACTGACAAACA
GAAAGCAAACCACAAACGAATTAGCAACATAGATTATATGATGTACGACT
ACTTCAATAACACATTTTGGCAACGTGTAACCGAGGAAGGACCCGAGTTT
TGGGAAGAGGTCACGTACTACAAGACCCTGAACCACCAAGTGAACCAACA
TTGTAACTCTGGCGGTGGAAAAAGAGTCTTTCCTGCCGGAAAATGGAGCC
AAGAGTTTGTGATCGACTCAACCTTCTGTAATGATTGGAAGTGGGCAGAA
GGGAGATGGGCGGCAGCGTGTTGGGACGTGGTTTACAGAAGAAACAAGCT
ATCAGCCACCCAAAAATCAAGGCCATAGCACGTCCAGGTCAAAAGATACA
AAAACGGAAGTTCTGCTGCAGTACCAAGGTCACATACCTGGGGCCCAAAA
TCGACCCTGAA Coding sequence (CDS) from alignment at Sc0000007:6419326..6424986+ >transcript:BL65589_cuf7 ID=transcript:BL65589_cuf7|Name=transcript:BL65589_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=1140bp|location=Sequence derived from alignment at Sc0000007:6419326..6424986+ (Branchiostoma lanceolatum)
ATGCAGACTAGCCTGGCACAGAACCTTCCATTCATCTATTTCCGTTCTCA
TCACGAGTCTTTGCTTTTGTACAGGACGGTTGCGAGCTGGTACTCCATGG
TCATCATCACAGAATACTGGGAGGAATCCCTGGTGCTGTTAAAAAGGAAG
TTTTGCTGGACCATGTACGACATACTACACTCAACAAGGAGACTCCATGC
TCTAAAAACACGCAAAGAACATGTCACACTGACCGACAAACAGAAAGACA
CTCACAGAAAGATGAGCAACATAGATTATATGATGTACGACTACTTCAAT
AACACATTTTGGCAACGTGTAACCGAGGAAGGACCCGAGTTTTGGGAAGA
GGTCACGTACTACAAGACCCTGAACCACCAAGTGAACCAACATTGTAACT
CTGGCGGTGGAAAAAGAGTCTTTCCTGCCGGAAAATGGAGCCAAGAGTTT
GTGATCGACTCAACCTTCTGTAATGATTGGAAGTGGGCAGAAGGGAGATG
GGCGGCAGCGTGTTGGGACGTGGTTTACAGAAGAAACAAGCTATCAGCCA
CCCAAAAATCAAGGCCATAGATGCAGACTAGCCTGGCACAGAACCTTCCA
TTCATCTATTTCCGTTCTCATCACGAGTCTTTGCTTTTGTACAGGACGGT
TGCGAGCTGGTACTCCATGGTCATCATCACAGAATACTGGGAGGAATCCC
TGGTGCTGTTAAAAAGGAAGTTTTGCTGGACCATGTACGACATACTACAC
TCAACAAGGAGACTCCATGCTCTAAAAACACGCAAAGAACATGTCACACT
GACCGACAAACAGAAAGACACTCACAGAAAGATGAGCAACATAGATTATA
TGATGTACGACTACTTCAATAACACATTTTGGCAACGTGTAACCGAGGAA
GGACCCGAGTTTTGGGAAGAGGTCACGTACTACAAGACCCTGAACCACCA
AGTGAACCAACATTGTAACTCTGGCGGTGGAAAAAGAGTCTTTCCTGCCG
GAAAATGGAGCCAAGAGTTTGTGATCGACTCAACCTTCTGTAATGATTGG
AAGTGGGCAGAAGGGAGATGGGCGGCAGCGTGTTGGGACGTGGTTTACAG
AAGAAACAAGCTATCAGCCACCCAAAAATCAAGGCCATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000007 | genome | Sc0000007:6419326..6424986 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL65589_cuf7 |
| Biotype | protein_coding |
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