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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL65636_cuf0 >transcript:BL65636_cuf0-protein ID=transcript:BL65636_cuf0-protein|Name=transcript:BL65636_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=308bp
MLIRSPLSPKALLRIYNACIKSIMLYGCEIWGKDYLNDKCPIEIIQNRFC
KNILGVQRSSSNVACRAELGIFPVDLDVSVRIVKYWLRLRQLDISSHPLQ
VDALLSRQHIPVNNRRKNWTQHVKEVLDNCGYSYIWYTDNPNIDVRQTCA
LLRRRLEDMYIQTFFHNLLKDEGKLRFYKNVKTIYDMENYLYHNDFDQRA
AICKIRISAHPLEIEKGRYKKLPVQDRTCKQCATKAVENEIHFICECPEF
ETERNRLFTKVSEISKNFSKLRNTQKLIFLLKSSNPLIIESVGLFIFHCF
QRRNQTPH Run BLAST on NCBI mRNA from alignment at Sc0000055:1384077..1385406- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL65636_cuf0 ID=transcript:BL65636_cuf0|Name=transcript:BL65636_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1330bp|location=Sequence derived from alignment at Sc0000055:1384077..1385406- (Branchiostoma lanceolatum)
GACGCCTATTCAAGGACGTGAATTTTTTCATTGGTTCAGAGAGTATTGAA
ACAGCAAGTTCTTACTGCTATTTAGGTTTGATGTTGTCGTCGTCGGGAAG
TTTTTCTCTTGCCAAAAATCAATTATCACAAAAAGCACGTAAAGCTANGA
CGTGTGTTTTGTTGACATCCTGAGTGATATTGCTGGAAGGGGTCGGGGCA
TTTTGTGAGTGATGGCTGCTTTTTCACACAGGGCTTCAGCCCGTTTCTGT
GGTGTGCATGCTNATTCGCTCACCATTGTCTCCTAAGGCCCTGTTAAGGA
TATACAACGCATGTATTAAGTCTATCATGTTGTACGGTTGCGAAATCTGG
GGAAAGGATTACCTAAACGATAAGTGTCCTATCGAGATAATTCAAAACAG
ATTTTGTAAAAATATACTTGGTGTCCAAAGAAGCTCAAGTAACGTAGCAT
GTAGAGCGGAGCTGGGTATATTTCCAGTCGATCTAGATGTTTCAGTCCGC
ATAGTCAAATACTGGCTACGACTCAGACAACTAGACATTTCCTCACATCC
CCTCCAAGTAGACGCACTTCTGTCACGACAACATATACCTGTGAATAATC
GTAGGAAAAACTGGACTCAACATGTAAAGGAGGTACTTGACAATTGTGGC
TACTCATACATTTGGTATACCGACAACCCTAATATAGACGTTAGACAGAC
ATGTGCACTGTTAAGAAGAAGATTAGAAGATATGTATATTCAAACATTCT
TTCATAACCTGTTGAAAGATGAAGGAAAACTAAGATTTTACAAAAACGTA
AAAACGATCTACGACATGGAAAATTATCTGTATCATAATGACTTTGACCA
ACGTGCGGCAATATGTAAGATAAGAATTAGCGCGCACCCATTAGAAATAG
AGAAAGGGAGATACAAAAAGCTACCGGTCCAGGACAGAACATGTAAACAG
TGTGCAACGAAAGCAGTGGAAAATGAAATACATTTTATATGCGAATGTCC
CGAATTTGAAACCGAAAGAAACAGATTATTCACGAAAGTATCCGAAATCT
CCAAAAACTTTTCTAAATTAAGAAATACACAGAAACTCATATTCCTTTTA
AAATCTTCCAACCCACTCATCATTGAAAGTGTGGGACTTTTTATTTTCCA
CTGCTTTCAGAGAAGAAATCAAACCCCGCATTAGTACCGTAGATATAGAA
ACTTACTGTAGAATAGCAATATAGAATGATTTTGTATTCATGTATACCTT
TGTTTTACCTTACATTTGTATTTCGACATTGTTGTCAACATGCAATTAGC
CTACGGGCATGAATTTGCAATAAACTATTA Coding sequence (CDS) from alignment at Sc0000055:1384077..1385406- >transcript:BL65636_cuf0 ID=transcript:BL65636_cuf0|Name=transcript:BL65636_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=927bp|location=Sequence derived from alignment at Sc0000055:1384077..1385406- (Branchiostoma lanceolatum)
ATGCTNATTCGCTCACCATTGTCTCCTAAGGCCCTGTTAAGGATATACAA
CGCATGTATTAAGTCTATCATGTTGTACGGTTGCGAAATCTGGGGAAAGG
ATTACCTAAACGATAAGTGTCCTATCGAGATAATTCAAAACAGATTTTGT
AAAAATATACTTGGTGTCCAAAGAAGCTCAAGTAACGTAGCATGTAGAGC
GGAGCTGGGTATATTTCCAGTCGATCTAGATGTTTCAGTCCGCATAGTCA
AATACTGGCTACGACTCAGACAACTAGACATTTCCTCACATCCCCTCCAA
GTAGACGCACTTCTGTCACGACAACATATACCTGTGAATAATCGTAGGAA
AAACTGGACTCAACATGTAAAGGAGGTACTTGACAATTGTGGCTACTCAT
ACATTTGGTATACCGACAACCCTAATATAGACGTTAGACAGACATGTGCA
CTGTTAAGAAGAAGATTAGAAGATATGTATATTCAAACATTCTTTCATAA
CCTGTTGAAAGATGAAGGAAAACTAAGATTTTACAAAAACGTAAAAACGA
TCTACGACATGGAAAATTATCTGTATCATAATGACTTTGACCAACGTGCG
GCAATATGTAAGATAAGAATTAGCGCGCACCCATTAGAAATAGAGAAAGG
GAGATACAAAAAGCTACCGGTCCAGGACAGAACATGTAAACAGTGTGCAA
CGAAAGCAGTGGAAAATGAAATACATTTTATATGCGAATGTCCCGAATTT
GAAACCGAAAGAAACAGATTATTCACGAAAGTATCCGAAATCTCCAAAAA
CTTTTCTAAATTAAGAAATACACAGAAACTCATATTCCTTTTAAAATCTT
CCAACCCACTCATCATTGAAAGTGTGGGACTTTTTATTTTCCACTGCTTT
CAGAGAAGAAATCAAACCCCGCATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000055 | genome | Sc0000055:1384077..1385406 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL65636_cuf0 |
| Biotype | protein_coding |
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