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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL65653_cuf1 >transcript:BL65653_cuf1-protein ID=transcript:BL65653_cuf1-protein|Name=transcript:BL65653_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=358bp
KDVNFFIGSESIETASSYCYLGLMLSSSGSFSLAKNQLSQKARKAIFSLK
HLIRSPLSPKALLRIYNACIKSIMLYGCEIWGKDYLNDKCPIEIIQNRFC
KNILGVQRSSSNVACRAELGIFPVDLDVSVRIVKYWLRLRQLDISSHPLQ
VDALLSQQHIPVNNRRKNWTQHVKEVLDNCGYSYIWYTDNPNIDVRQTCA
LLRRRLEDMYIQTFFHNLLKDEGKLRFYKNVKTIYDMENYLYHNDFDQRS
AICKIRISAHPLEIEKGRYKKLPVQDRTCKQCATKAVENEIHFICECPEF
ETERNRLFTKVSEISKNFSKLRNTQKLIFLLKSSNPLIIESVGLFIFHCF
QRRNQTPH Run BLAST on NCBI mRNA from alignment at Sc0000055:1392450..1394820- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL65653_cuf1 ID=transcript:BL65653_cuf1|Name=transcript:BL65653_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2371bp|location=Sequence derived from alignment at Sc0000055:1392450..1394820- (Branchiostoma lanceolatum)
CAAGGACGTGAATTTTTTCATTGGTTCAGAGAGTATTGAAACAGCAAGTT
CTTACTGCTATTTAGGTTTGATGTTGTCGTCGTCGGGAAGTTTTTCTCTT
GCCAAAAATCAATTATCACAAAAAGCACGTAAAGCCATTTTCAGTCTCAA
ACATTTGATTCGCTCACCATTGTCTCCTAAGGCCCTGTTAAGGATATACA
ACGCATGTATTAAGTCTATCATGTTGTACGGTTGCGAAATCTGGGGAAAG
GATTACCTGAACGATAAGTGTCCTATCGAGATAATTCAAAACAGATTTTG
TAAAAATATACTTGGTGTCCAAAGAAGCTCAAGTAACGTAGCATGTAGAG
CGGAGCTGGGTATATTTCCAGTCGATCTAGATGTTTCAGTCCGCATAGTC
AAATACTGGCTACGACTCAGACAACTAGACATTTCCTCACATCCTCTCCA
AGTAGACGCACTTCTGTCACAACAACATATACCTGTGAATAATCGTAGGA
AAAACTGGACTCAACATGTAAAGGAGGTACTTGACAATTGTGGCTACTCA
TACATTTGGTATACCGACAACCCTAATATAGACGTTAGACAGACATGTGC
ACTGTTAAGAAGAAGATTAGAAGATATGTATATTCAAACATTCTTTCATA
ACCTGTTGAAAGATGAAGGAAAACTAAGATTTTACAAAAACGTAAAAACG
ATCTACGACATGGAAAATTATCTGTATCATAATGACTTTGACCAACGTTC
CGCAATATGTAAGATAAGAATTAGCGCGCACCCATTAGAAATAGAGAAAG
GGAGATACAAAAAGCTACCGGTCCAGGACAGAACATGTAAACAGTGTGCA
ACGAAAGCAGTGGAAAATGAAATACATTTTATATGCGAATGTCCCGAATT
TGAAACCGAAAGAAACAGATTATTCACGAAAGTATCCGAAATCTCCAAAA
ACTTTTCTAAATTAAGAAATACACAGAAACTCATATTCCTTTTAAAATCT
TCCAACCCACTCATCATTGAAAGTGTGGGACTTTTTATTTTCCACTGCTT
TCAGAGAAGAAATCAAACCCCGCATTAGTACCGTAGATATAGAAACTTAC
TGTAGAATAGCAATATAGAATGATTTTGTATTCATGTATACCTTTGTTTT
ACCTTACATTTGTATTTCGACATTGTTGTCAACATGCAATTAGCCTACGG
GCATGAATTTGCAATAAACTATTATTATTAATCTCATCAGTGTAGATAAC
CAATGAGGAATGAGGGACAGACTCAAGGCATGATGAGATCAATCTCATCA
ACCAATAGGGAAAGGTGCATTCTTATTACCAATGGCAACCCGGAATTCTC
TTCTTAGACGAATCACAGAGCAGTATTTTTCCGCGTGCCGTGTGCAAAAG
GCTTTCACCTGGCCAAGCGGGAGCTTTGAGCGTCACTTCTCGTCTAGCTA
TCACCAAGGGAAGACCTCATGGCTTTTGTCGCCGTCAGCACACCGACAGC
CGACATGTTAGGTATGGCAACAAGCTGGGATTTAACGTCCTCGCTTATCA
AGCGTCTGGTCGAAACGGCTCAGCTTGGCGACAAACCCGAAAAGAAGGCT
TCCAGGGCCGGTGTTCCAGACGTCACCGAGACCATCTTCGGTGACATGCG
GTGATTGTTCGTAAAGGTGATTTATTCCCTTGTGTTGGGAAGTTACAGAC
TGTTTTGATTTCTGGATGTGAACAATGTTTTAACGCTAGAGAAGTCTTGT
TCTATTCTTGGTTGTCTGATTGTGAATTGAATGTAACGGTTAGGATTTGA
AAATCATGTGATTGTATTCATGTCTGATTCTTCCGCCAATATGCAATGTC
GCAGAGAATTATGTCTGGTGATTTAGTCCTTTGTGCTGGAAAGTTTAAGT
TTACCGACAGTTTCAATTTCTGGACCTGAACAATGCTTTAATGCTAGTAA
AGCCTTGTTGTTTTTTGTCAGCTTATGCATGTCTGTTTCTTCCGCCAGTG
TCTCAGACATGTCTAGACGGACTACTCCGGGACGCCACCATCACTGACGG
CGCCATGTGACAACATCCAGTACATCACGAAGCCAAGGATGTGTCAAGCG
ACTCTCCTGGCTTATCCACGAGAACCGTAACGGTTGTGTTCTTTTGTTAA
TGTTGAGACGGACAGCAAGGTCGAGAATTGAACTCGCTACCTTCAGGATA
TTCAATTTGTCTTGTTTCGCAGCGCAAAAATATGTTACTCTGCTTGCTTG
CTTACTTGCTTATGTTACTATGCCTCATCCTAATTGATTATTTCACTTTC
TTGCAGTTGCAAAAAAACCGGAAGCTGACATCTCTCAGCAGCTTCCCGGA
ACCGCATTGATGACATCAAGC Coding sequence (CDS) from alignment at Sc0000055:1392450..1394820- >transcript:BL65653_cuf1 ID=transcript:BL65653_cuf1|Name=transcript:BL65653_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1077bp|location=Sequence derived from alignment at Sc0000055:1392450..1394820- (Branchiostoma lanceolatum)
AAGGACGTGAATTTTTTCATTGGTTCAGAGAGTATTGAAACAGCAAGTTC
TTACTGCTATTTAGGTTTGATGTTGTCGTCGTCGGGAAGTTTTTCTCTTG
CCAAAAATCAATTATCACAAAAAGCACGTAAAGCCATTTTCAGTCTCAAA
CATTTGATTCGCTCACCATTGTCTCCTAAGGCCCTGTTAAGGATATACAA
CGCATGTATTAAGTCTATCATGTTGTACGGTTGCGAAATCTGGGGAAAGG
ATTACCTGAACGATAAGTGTCCTATCGAGATAATTCAAAACAGATTTTGT
AAAAATATACTTGGTGTCCAAAGAAGCTCAAGTAACGTAGCATGTAGAGC
GGAGCTGGGTATATTTCCAGTCGATCTAGATGTTTCAGTCCGCATAGTCA
AATACTGGCTACGACTCAGACAACTAGACATTTCCTCACATCCTCTCCAA
GTAGACGCACTTCTGTCACAACAACATATACCTGTGAATAATCGTAGGAA
AAACTGGACTCAACATGTAAAGGAGGTACTTGACAATTGTGGCTACTCAT
ACATTTGGTATACCGACAACCCTAATATAGACGTTAGACAGACATGTGCA
CTGTTAAGAAGAAGATTAGAAGATATGTATATTCAAACATTCTTTCATAA
CCTGTTGAAAGATGAAGGAAAACTAAGATTTTACAAAAACGTAAAAACGA
TCTACGACATGGAAAATTATCTGTATCATAATGACTTTGACCAACGTTCC
GCAATATGTAAGATAAGAATTAGCGCGCACCCATTAGAAATAGAGAAAGG
GAGATACAAAAAGCTACCGGTCCAGGACAGAACATGTAAACAGTGTGCAA
CGAAAGCAGTGGAAAATGAAATACATTTTATATGCGAATGTCCCGAATTT
GAAACCGAAAGAAACAGATTATTCACGAAAGTATCCGAAATCTCCAAAAA
CTTTTCTAAATTAAGAAATACACAGAAACTCATATTCCTTTTAAAATCTT
CCAACCCACTCATCATTGAAAGTGTGGGACTTTTTATTTTCCACTGCTTT
CAGAGAAGAAATCAAACCCCGCATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000055 | genome | Sc0000055:1392450..1394820 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL65653_cuf1 |
| Biotype | protein_coding |
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