transcript:BL66697_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL66697_cuf0
Unique Nametranscript:BL66697_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL66697_cuf0

>transcript:BL66697_cuf0-protein ID=transcript:BL66697_cuf0-protein|Name=transcript:BL66697_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=140bp
DQEVTITSVPDETLTNHTSNNSNAEAGMEPGQESDTGDEASDVEETNGEP
ILDNPEGRTGTRQPKGRAYSTRSRTHSNVNSQKHTGEDKGNNDSENNTPD
VHGDGQRDSTQPSIELWLKEQRKAKGKQNAKGSKSKKKTT
Run BLAST on NCBI

mRNA from alignment at Sc0001892:201..1098+

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL66697_cuf0 ID=transcript:BL66697_cuf0|Name=transcript:BL66697_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=898bp|location=Sequence derived from alignment at Sc0001892:201..1098+ (Branchiostoma lanceolatum)
GATCAAGAAGTCACCATCACCAGTGTACCTGATGAGACCCTCACCAACCA CACAAGCAACAACAGTAATGCAGAAGCTGGGATGGAGCCGGGACAGGAGA GTGACACAGGAGACGAGGCCTCTGACGTAGAAGAGACGAATGGAGAGCCG ATCCTGGACAACCCTGAGGGAAGGACAGGAACCAGACAACCCAAGGGACG TGCATACTCCACAAGAAGTAGGACTCATAGCAACGTAAACAGCCAGAAAC ACACCGGAGAAGACAAAGGGAACAATGACTCTGAGAATAATACCCCTGAT GTACATGGAGATGGACAACGGGACTCAACACAACCATCAATTGAACTGTG GTTAAAAGAACAGAGAAAAGCAAAAGGGAAGCAAAATGCAAAAGGAAGTA AGTCAAAGAAAAAAACTACATGAACTGTGTAAATAATATATCATGTTGTC AGAGGTTTCCATTTCAAAACTCCACAAATGTTTAAATCACCATGAATACA TGTAAAAACATTAAACTGATTTCCTTTAATTGTAGAGGAATCAGATCATA TACTAAAAGACTCAAGATTATGTCTTGGTTAAAAAAGAAAAAGGCTGACA TTTATCTATTACAGGAGACTTATCTGACAAATGATATGAAACATACTATT GATAAGCAATGGACAGGTAAAACCATTCACTCATTTGGAACAAACCATAG TAGAGGTGTAAGCATTCTCTTTGATAATAACCTACCTATGGAAATCCTTG AGCAAAAAACAGACACTGAAGGAAGAAAAATTGTTGTTAACTTCAAACTG TATAATGAGAAGTATACTCTACTATGTATATATGCACCAAATGGGCAAAA GGAAAGAACTGTTTTCTTCCAAAATACTCAAGAATGGTTACACGACTG

Coding sequence (CDS) from alignment at Sc0001892:201..1098+

>transcript:BL66697_cuf0 ID=transcript:BL66697_cuf0|Name=transcript:BL66697_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=423bp|location=Sequence derived from alignment at Sc0001892:201..1098+ (Branchiostoma lanceolatum)
GATCAAGAAGTCACCATCACCAGTGTACCTGATGAGACCCTCACCAACCA
CACAAGCAACAACAGTAATGCAGAAGCTGGGATGGAGCCGGGACAGGAGA
GTGACACAGGAGACGAGGCCTCTGACGTAGAAGAGACGAATGGAGAGCCG
ATCCTGGACAACCCTGAGGGAAGGACAGGAACCAGACAACCCAAGGGACG
TGCATACTCCACAAGAAGTAGGACTCATAGCAACGTAAACAGCCAGAAAC
ACACCGGAGAAGACAAAGGGAACAATGACTCTGAGAATAATACCCCTGAT
GTACATGGAGATGGACAACGGGACTCAACACAACCATCAATTGAACTGTG
GTTAAAAGAACAGAGAAAAGCAAAAGGGAAGCAAAATGCAAAAGGAAGTA
AGTCAAAGAAAAAAACTACATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL66697gene:BL66697Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL66697_cuf0-E1BL66697_cuf0-E1-1564476830-511415Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL66697_cuf0transcript:BL66697_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0001892genomeSc0001892:201..1098 +
Properties
Property NameValue
Transcript idBL66697_cuf0
Biotypeprotein_coding