transcript:BL66737_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL66737_cuf0
Unique Nametranscript:BL66737_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL66737_cuf0

>transcript:BL66737_cuf0-protein ID=transcript:BL66737_cuf0-protein|Name=transcript:BL66737_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=517bp
RQPLPVVHQKKYCISLRKDIITMKLTINIFLFLGLLWLTNAGYPRLHFAG
NFLADTATLNNDPRQFNIHKFNASRDPPCYLNYTFPHCDWNPNGSSDFRF
VNCFVKKVCYKDAKCSKFDALVGKRIIGSDDNVAAKMTDLDPFFQMYTAQ
LWGLVVGVEGAFQGKFKTNTVRDVWQRCKDEDCSGDPGTSGYWSSVLTNV
TWMEEATGSRFINELRHHEQDNTILNIKFTVDLMHEDPNGNDFALGRVIG
TISAVDGSLELLPEFNRMLWWQGPQWLSPGPLSVSAEKNSNVSEFCNAPF
YVDIQNSKVVVDLSNSLQTNLEGALIHKGKLFLVILPNDFSFAMAGGKIT
DCRALLQQGSNKLGRIPYTNSGFLVNDTGIATFCLVAAAYRSPLMIVREE
EPRCPDCPIQCTPVLVEHLDGLYIGPAEDRVFRIPQPKTEIPLLDEEDKS
EEDEDGKVCWSLTVFAARFGRPKAGVLLSVQKYNRPGVSTGEPADAIEIR
PGDCRGHAKAATNAYGI
Run BLAST on NCBI

mRNA from alignment at Sc0000120:299461..311429-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL66737_cuf0 ID=transcript:BL66737_cuf0|Name=transcript:BL66737_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=11969bp|location=Sequence derived from alignment at Sc0000120:299461..311429- (Branchiostoma lanceolatum)
TTAGACAACCTCTACCAGTAGTTCACCAAAAAAAATATTGCATCAGTCTA CGGAAAGATATCATCACAATGAAGCTCACAATCAACATTTTCCTGTTTCT GGGATTGCTATGGTTGACAAATGCAGGTGAGCTGTTTTGAGTTCTGAAAT ATTGCAGCAATCGTTTCAAATTTCTAAAGAAGGATTCACAATCCTTCTTT GAATTACATTACACTGTGACATTGTTTCATAACAAAAATGCAAGCAATAA ACGTCTTGACATTTTCTCGTCACCCATGCAGGCTATCCCCGTCTTCACTT CGCCGGAAATTTCCTCGCCGACACCGCCACCCTCAATAATGATCCTCGCC AATTCAACATCCACAAGTTTAACGCAAGCCGGGACCCGCCATGCTACCTA AACTACACCTTCCCACACTGCGACTGGAACCCGAATGGCAGCAGTGATTT CCGGTTTGTCAACTGTTTCGTGAAGAAAGTCTGCTACAAGGATGCAAAGT GCTCCAAATTTGATGCTCTAGTCGGCAAACGGATCATTGGTACGTGGGTT AAAAAGTCATCTCTGACGCATGTATCTGCTGTCCAATTTTCCATATGATT TTTGTTATACATGAATTTATCCAAACAGTCAGTGCTTCCTTGCTTATATG GGGTGTAGGCTTTTTTCCTCATTGTGAACCATCACTGTTTTCCAGAAGCT TTTGTCCGACATTTGCCATCCCCAAGCTTTGTTTGTTTTACTGTGTCATC TCGTAACCACTACAATAAGATAGATCAAAGAATAAGACATTATTGTTTCT CTGGTTATCAAAGGCTACTTTACCCTAAAAGTATGTACAGTGTATGAAAT GAAATTCTCAAGAATTTCCCCACGAATGATTTTCTAACAGGAAGTGATGA CAACGTAGCTGCCAAGATGACAGATCTGGACCCGTTCTTCCAGATGTACA CCGCACAGCTGTGGGGTCTCGTTGTCGGTGTGGAGGGCGCTTTTCAAGGC AAGTTCAAGACCAACACGGTGAGGGACGTGTGGCAACGATGTAAAGACGA GGATTGTTCTGGAGACCCTGGAACATCCGGGTACTGGAGCTCCGTACTCA CAAATGTGACATGGATGGAGGAAGCAACTGGCTCCAGATTCATCAACGAG CTTAGGCATCACGAACAAGATAACACTATCCTGAACATCAAGTTCACAGT AGACCTGATGCATGAAGATCCTAACGGAAATGACTTCGCTCTTGGACGAG TCATTGGGACCATTTCGGCTGTGGACGGAAGTCTGGAACTCCTGCCTGAA TTCAACAGAATGCTGTGGTGGCAGGGCCCTCAGTGGCTCTCACCAGGCCC ACTGTCAGTATCAGCAGAGAAGAATTCGAATGTGAGTGAATTCTGTAATG CACCATTCTACGTGGACATTCAAAACAGTAAAGTCGTTGTAGACCTCAGC AACAGTTTACAAACCAACCTGGAGGGTGCTCTTATTCATAAGGGAAAACT CTTCCTTGTCATTCTTCCAAATGACTTTTCTTTTGCAATGGCGGGAGGAA AGATCACAGATTGTAGAGCTCTCCTACAGCAGGGTTCCAACAAGTTGGGT CGTATTCCATATACTAACTCTGGTTTTTTAGTGAATGACACGGGGATAGC AACTTTTTGCTTGGTAGCCGCGGCATACAGGAGCCCACTGATGATTGTGA GAGAGGAGGAGCCCAGGTGTCCGGATTGTCCCATACAATGTACACCTGTC CTTGTTGAACACCTGGATGGACTATACATTGGTCCAGCGGAAGATCGTGT TTTCCGTATTCCGCAGCCTAAAACCGAGATTCCGTTATTAGACGAAGAGG ACAAAAGTGAAGAGGACGAAGATGGTAAAGTCTGCTGGTCATTGACAGTA TTTGCTGCGCGGTTTGGAAGACCAAAGGCAGGTGTTTTGCTGAGTGTTCA ACAGTACAATAGATCCGGAGTCAGCACTGGCGAACCAGCAGATGCAATAG AAATCAGTGCTGGCGACTGTAAAGGACATACCAAAGATACGACAAACGCA TATGGCATAGGTGCATTCCATTTCAAGACCAACAGAGAAGGGCTGGATTG CAGTCGTCGTCCGTCTAATAGGGAGCACTTACATGTATTTGGCCAGTTGT ACATCTACAGCGTGACGTTGTCAGACGACAAGTCTTTTCCTCCCGATCTC CTGACATCTACACATCTGTACTGTAAACTGGACAAGAAAGACAGCTACAC TTGGGATGATATCTACCCGATTTTAAAAGTGTACGAGAACCTTTACCCTG TGATGAAACCACTTTTCAATCTGACCTCCCAAGAAGACCTAAGAGCCCCT CACCGATCATCGTACATGCATTACGCTATGAGTCTGCCTATAGAGAATCC GAATCACATGCCCGTCACACGTGATCTTTCTCCAGCAAGAAGAGACATGA TCTTGGACTGGCTAAAACCAAAATCAAGGTTAAGTGTACCCTCTCCAAAT GCCAGACTGGAAGTTATAAAGCAACATCTTCATACAGCTCTTCGACTCGA GTGGGCAACGATCCCTCCTTACCTGAGCGCTTATTACAGTCTTAAGGATG GGTACAACGAAGAAATCGCACAGCGTCTTAAGAGCATTGTGATAGAGGAG ATGAAACACATGTCGCTGGTGGCAAATATCCTTAATTTTCTCGGGGATGC ACCAATCCTTAATGATCCAAAAGAGTTCCCTAAGTTTCCAAAACCTCTTC CTGGAGGCGTAATGCCTGGGCTCACCGTTGAATTGGCCAAGTTTTCTTTG AATGTCACTCATGATGTCTTCATGGCTATAGAGACACCAGAATGCAATAA GAACCTCCTGAACGTGCATGATATACTCCGAGCAATACCTCTTCGTGCAC CCCCTATAGAGGTGCCTAAACAATGCCTGAAGGTCGATAACAAAGTCAAT TGCGATCCACTATGTGAAAATATAACAAAAAAGTGCGAGGAGTCAGATAA GGACTTTGACAATGCCACAATTGGAGCGGTCTATATTCACAAAATCTTGT GCCCCATGATCAAACTATACAACTCAACTCCAGAGCTCTTTGCCCCAAAA GAAGACGACCTGAAGAAACAAGTCCCCAGACCGTTCTGCATCCTTGACAT CTGCTCAGCGATAGAAGGAATAAAGTACATTGTTGGCGAGGGGGAGGGCA GTGATCCGTGCAATCCCTTCTTTGAAGAAGATCGAGAGCTCAGCCACTAT TACAAGTTTAAGGAGATCTGGAAAGGGAGAAAATTGAAGGAGACGGCCAA CAGTGTCCATGATGGAGATGAAGATCCATTTTTCACCCCGTGTGGGAAAG ACATGACTTGTCCAAAGAATTACAGCTTCAGCGGTGATATTATACCCTTC CACGAGGAAGGAGTATGGCCGACTGTCGTGAACGCCAGCACGTCGAAGTA CCCACCAGGATCGAGGGCTCGCATTCTGTCCGACAGCTTCAACCAGAAGT ATGTCAACATGATGAACTGTCTGCATGACGTTTACAATGGCAATCCTGGC CTCTTCCTTCAGTGTTACGCTCTGATGACGTCTCTGACTGTAGACGCTAA GAGACTTGTCCAGACCCCCATACACCCCGGTGGACCGCATGGTGCCCCGA CTTTCGAGTGGCAGGGTTCGAAATGAACGATTTTCTAATGGCCACTGATC AGCAACATTTCTCTCGGGCCAAATCAATGTGCCCTTGGGGACAATTTTGG GACAACAGAAGAAATTGGCCGATGCAAACTTTCAGTTCAGCAGCAAATAT ATGCCTTTCATTTTTTCCATCAAATTTCTGTTTATGCGGCAAAAATAATC TTAACACCCTCCAGATTAATTTTGGAATTTCTATTGCACTTTGGACTAAT GCTTGGAGCCTTTGATGACAGCTTATACTTACAGAATTGATATTTTGTGA ACAACTTTCTTGCCACTTAATGGATCATAAGGACCCACAGCGGGGGTCAT CACGTGTTGTTGAAAATCGAAAAATGCCTTTTCTGCTGACAATTTATAAA TGGTACGTAAACAAGAGTGGGTGCCATTTTGATTTGCTCATCAGAATTTT CCAGCTTATTACGGAAAAATGTTAAGGCCATTCCGTCAACCTTGACGGAC AAAAATTGATGGGAAAAGATGTATAAGAAAAGTATCATTATTAGAAATAT CTACAATTCTAAAATTGAGTACATCAGGGCATTACCTCATTACCACACTG GCCTACTGGAGGACGCTTTTTTCTGACACTGAAAAATTAAGGAGCCAATA AATCTATTGCAAATACAGTATGTATATATCTGTGTAAAAAGCCTGGTGAA TATCTAAACCCCCAACTTGTTCTGGATAAACTTGGAAACATGAACAATCA AATAACATTATAGCAAAAGACATAGATTGTTAGGAGATATGCTAAATTCA AAATGCATTTAACTTTGCGTGGTTTTAATTTCGCGGTAGGGAGAAAATGT ACTTGTTCGCGGTGGTTTTCAGTTTGCCTTTGAGATAATAGTAGACAATA TATAGACAAGGGGGTAGGAGGGCAAAAAATTTTGTGGTGGTTTTAAGTTC GCGGCAAAGAGCTTACCGCGAAAACCGCAAACATAAAACCACCATGAACA TTTTTGCATTTTACAGCATCTCTTCAGTTATGATATTATTGCATGGTTTA AATAATACCAAGTAAAGCACAGCTCAATTCAAGAAAACTTAAGATTTTAA AATTATCTTACTTTCTGCATTCAAATCAGTATAAGGTATAATTATGTACA TTTGTATAAGGTGACTTCTGGGTGACTTCTGGAAAGAGAGAGTGAACTTC ATCTGCGCCCAAAATGATGATTAACTTAAGCTAATAACAATCCTTTTTAG ATATTGGAACATTATGTCCTTTGTTATGTTCTTAGTTATCTAATCTGATT TATCTGGTTGTATAAAATTTCAACATAAGTGTCATATAACAATCCAATAT GGGCTTGGGGAAGCCATATTATGCATGAAACAATAATTAAGTAATACTAT TTATTAATTCATTGATTAATTCATTATTTCATTCAATAATTCATTTATTA ATTCATTCATTCATTCAGACTTCTTTAATGGGTTTAATAAAAATAAAGCA TCATTTCTGTTCTTCTCTTTACATATTTTCTTGTTATATTTACTTCTAGT CCAACATAAATGGCTACATACACCATATATTATAACTATATATGAAAGGG AAATACATATTATGAATGAAAAAATTTAAAGTTGCCTGATGGGTGCTTGA AACGTCTGAGAATACAAAATATGTATTAATCCAGTAGAAAGATTCAATTC TGTGGGATGTATCATTATTAGAAATAATCTAGATTGCTAACAAACCTTAG GGACACAATAAAGGTTTGTCTCCAAGCAGATGTAGGCTCCGAGTTGTTTT AAATGTCCAGTCAGCAAGCTAGGAGAGGGCAACAAACAAACCTCAGGGAC ACAATGAAGGTTTGTCTGGGAACAAACATTACTGGCTTAGATATTAGTGA TGATGAAATTTTAGCTGTTGACTAGTGACAGTTAAATCAGCTAAAATTGA AGAATTTTATATACAGTTATTGTTTCTCTGGTTATCTAACTAACTTAAAG GCTACTCTACACTATGCATGAAATAAAATTCTCAAGAATTTACCCACAAA ATAAATGATTTTTTAACAGGAAGTGACGACAACGTGGTGGCCAAGATGAC CGATCTGGACCCGTTCTTCCAGATGTACACCGCACAGCTGTGGGGTCTCG TTGTCGGTGTGGAGGGTGCTTTTCAAGGCAAGTTCAAGACCAACACAGTG AGGGATGTGTGGCAACGATGTAAGGACGATAATTGTTCTGGAGACCCTGG AACATCCGGGTACTGGAGCTCCGTACTCACAAATGTGACATGGATGGAGG AAGCAACAGACTCCAGATTCATCAACGAGCTTAGGTATCATGAACAAGAT AACACCAGCCAGCCCCTTGGTAGAGGCCATAAAAGCCGGGCAGCGTGAGT TTGTGTTATACAGACTATCCCACTTGCGGCCATAATAAGGACTGTATGGT TATGAACCACTCATACCAAAAAGGGCCCCCACTCTTTATGATCAGTGTGG TGGCTTCTTTGATGTGCTCAAGGTGTGGCTCTCTTTAAGGGACAGTACGA TAATTTAAAGGCTGGGGCGCTGGAAGTCCGGTCCCGAACATTTTCCATGG CCTCTCCCCCATCTCAATATTTTTTTCCATGCCCTTCCCCCCCCCCTTAA AAATTTTTTCAATGGCCCTCCCCTACAGGTATTATATAAAAATGGTCACA AAGCTCGTCAGATATGGCCGTCAGGGCGACGGCATCCCACTGGGACAGCT GATGCATGCTATGAAACAAGAACGTTGCTGCTTCAAAAATGTGCTATTGG GGTCAGGGCTGTCTCCAGGTTGAAATTTATTTCCACGCTCTCAAACATTT TGGGTTGGGATAGGCCTTTTTCAAAACACTGTCAGGAAAATTATAAAAAT TCACAGAAGATTTCAGATAAGATACCGAGATGATTCTAAAGATATCCAAT CAGTTAGCTTGCATTCACATTTCCAATGACTAGAAAGTAATTTAGATTTA ATGACTTTTTTCTGATACTTGATCCCTATTTTTTCCAGTAAATTCGTCTG ATGACCTTCTCTCATCTCCCAAACAAACATACCCCCCTAGAATAACCATA CCCCCCCTGGACAAACCTTCAAAATATAATAAACGTACCCCCCATATAAA CATCCCCCCCGGAAAATGACCAAAGTTACAGATAAACTGTGTCCATGCTT TTAAGTGATAATAATGGTGACTAGATTGCAATTATTCAATTTTATATATA GACTTTAATATTGAAATTCTGTTTGTAAAAATGCAAAACATATTTCTGAC AAAGGCAAAGGAGTTTTATTTGTAGCTAGTGAATCAGATAAAAAAAGTTA TTTCCCCCTCTTCGAGGTAAGCTCTTCCATGCATGAGAAACTTTCCCACG GACTGTCAGTGCTGTGCGTCTTTACTGTGGCGATTTTCGAAGGACTAAAT GTTAATGTTTGAGGTAGGATTGAAACTTTTCGGTATATTTTGAGGGTTTG CTAAACCTCTAGATGAGGTTTAGCAGTTGCTAAACCTCTAGATGAGGTTT AGCAAACCCTCTGACTGGCTGAAGCTGTTTTGGTGGCGATGGCGGCAGAA CCGTGTCTACCGGGGCTAAAGAGCAGGGCCCCTACGTGAGCGAGCTAACG AATCGAGTGATAGACAAACACAAACTCACACACACACTGTATGGCACTCA AAGCATAACATATGGTAATGAGTTAATCAACTTGATTTTTAATGGTTAGA AACTCTGTCCGCTTAGCATACAACAGTTACTATATTGTACCAATTCATTG TCTTTATTCAGGTTTAAGATAACCTCCACCACAGCAGTTCTCCACCAAAA CTCTGGAGCTGTCCACGGCCGGATGCCGGCAACGAAGCTGACAATAAGCA TCTTCCTGTTTCTGGGACTGGTGTGGTTGACAAATGCAGGTGAGAATCTG TTCTGACTCCCGAGTTTTGAAAATTAATCTATACTTTCTATTGCAGCAAC TGTTTTCCGAGGAGGATGCACTATCCATTCATGAATTACATTGATTACAA TGTGATTTATAACAAAATCCAATGCCATGTTGCCTGCATGTGGTGCTTGA TAGGGATGTGTACATGTAGTACCATAACAGTACCACGAAAATTGTTAAAA AGTATGGGTCCAAAATACTAGTACTGTACCTGAATAGATTTACACTCAAG TGTATCACTCTTTGTTATTTATAACAGCCTCCAGTCTAATTTGGGGATTC CAGTTTAATTTGAGACTACCTCCCACATTTCAGCAATGGTAAGTAAAAAT GAAGTTGAAAATATGTACATGTAGCAGCCATTGATGACCTCCTGGGTATT AGCCCAATTCTGAAGAATTCTGCCAAATATAGCCAGAATTCTGTGGACTG GACCTAGAATTCTGCAGAATTCTGTGAACTGGAGCTAGAATTCTGCAGAA TTCTGTGAACTGGAGCTAGAATTCTGAAGAATTCTGGGAACTGGAGTCAG AATTCTGAAGAATCATACCTTCCGGCACTTATACCTTTCACCTTGGTCTT TTCTTCCTTCAACTTGGTGTTTTCTTTTTGTACATCATCTCTCTCGAATT CTGGCTCCAGTCCCCAGAATTTTGGCTCCAGATCCCAGAAATATTTTTCA GAATTGGGCTAATCCATAGGGGTCCTCAATTGCTGCTTAATATTTTTAAC TTCATTTTTACCTATCTGATGTGATATTAAGCCATTTGGGTTTAAGATTG CTGAAATGTGGGAGGTAGTCCCAAATTAAACTGGAATTCCCATATTAAAC TGGAGGCTGTTCTACTTTGTTACTAAAAGAATAAGTTTAACATGTTATTC CTGCCAAAAAGATGAAAATTTACTACTGATGGATCATAAATCATTGAAAT CAGCACCATATTTAATTTGAGATCCTGTCAAAACCATGGGTTCTCTGCAT AAGATACCGTACCTAAAGTCTAAATATTCAATATTCTGTTAACTGTGCAT TCATGTTTCTGTCATTAAAGATCACCTGTTACTTACTATAAACGTCTTGA ATTCTCTTGTAATCCAGGCTATCCCCGTCTTCACTTTGCGGGAAATTTCC TCGCCGACACCGCCACCCTCAACAATGATCCTCGCCAATTCAACATCCAC ACATTTGATGCAACCCGGGATCCGCCATGTTACTTAAACTACACCTTCCC ACACTGCAACTGGAACCCAAAAGGCAGCGGTGATTTCCGGTTCGTCAACT GTTTTGTGAAGAAAGTCTGCTACAAGGATGGAATGTGCTCCAAACGTGAC ATTCTAGTCGGCAAACAAATCATTGGTACGTGAGTTAAAAATAAAAGCCT AGGTCATCTCTCATGCATGTACATCTAAGGGACTGTACGAAACTTACAGG GGGGGAGGGCCTAGGAGAAAAATTTTGACCTGGGGAGGGCCTGGGATAAA AATTTGATCCCCTTCAGAACCTTCAAACACATATCTAAATTTCAAAAAAA GCTCAGAGCCACTCAGAAAACCCCATGTTTTTGGCTAGGAGCGGAGCGCA TGTACAGATGAAATGCAACGTTATTTTGTGGCCTGTCTTGAAATTTATGC TGGATAGATATGATAATGAAAGATCCTTTTGATATATATATATATATATA TAGATTGTTGCAAAAGACTGAATATATTAGAAACCGGTCGAATTCCGTCT CAGCGCTGTCATTATCCCAGAACTACAAATAATATATCAATATGTAGTAC AAACATGGGTTGCGACTCTCTAAAAATCATGTGCCGAGCGGTGTTTTGTG CTGAGTGGTGGAGTCGCTCAGTGAGCCTTGTTTGCCACTGTACTAGAGTT CCCAGGATAGGTTCGGCAGGTTGATTGCAGGTGTCCAGCAATGTACTTTA AAATTTGTAAATACAGTATTAAATCATACACTGTGACCATAAAGCACCCA TCAAAACCTTCCAAAGCATTCAAGGAAGTTATTAAATAAGGAATAAGGAA ACCGGTACCGCGCGTTGTTTGAAAGTGGGCACTATCTTGAAAAATATGAC AGCCGAGAACTTAAGTTTTAGCGTCGTTGATCGGCGCTCACAGCGATCAA TGCTGGATGCGNAAGTTATTAAATAAGGAATAAGGAAACCGGTACCACGC GTTGTTTGAAAGTGGGCACCATCTTGAAAAATATGACAGCCGAGAACTTA AGTTTTAGCGTCGTTGATCGGCGCTCACAGCGATCAACGCTGGATGCGCA GTGATTTTCTTGCCGTCTTGAATATTTTTCAAGAGTTGATAAGAGGGTTG AGGGCCTAGGAAAAAAAATTTGGCTTGAGGGGAGGGCCTAGGAAAAATTT GTTGATCTGGGGGGAGGGCCTAGGAAAATTTTTTACCTGAACCTGTACCT AAACTACTTGTTGGGAAAATGCTAGATTTTCAATAAGGACAAATGCATGT TTAAACTGGTAAAAACAAAATATTTGATTGTGCTAGGTATTGTTTTTATG AAAACACAGATGAAAATTTGACTCCAGCCATGCAAATGTGTTTTCTGTGC TTTAGAGTGGCTTTAGAGTACTGCCACGGTAATTTCATAGTAATTTTATC TGTCAAAGTGGCCATCCCCTGAGTCAGGTCCAGTACCGGATACAGCAGGG TCAGGTATTTTGGACCACCTAATTGATTGCACCCGGTACTGTACCGGTAC ACTGTACCGGTACACAGCTCTACTCCCCCCTATAAATTTCGTACAATCCC TAATGTCCAATTTTCCATATGATCTTTGTTACCTTCGCAGAGAAGGTTAT GTTTTGCACAGCACCCATGATAACTTCAGAAGTTAGGTGGGTTAGAGGTC TTGGTGAGACCTTGAGATGTTGAAAATACCTGTCCAGTGTCCTGAAGCAT TTCATCTTTATATTGTTGTGTACTTGTGTATTTTTATTTTGTTGGATCAC TTTGGCCGAAATCACAGAACTGCAATCAGAAACACAGAATTTTTTTTCCT AGGCCTAATTATAACAAGAATAAAGGAGATCAAAGAATTAGACCTTGTAA GATAACTGTTTCTTTGATTACCTAAGACTACTTTACACTATGTATGAAAT GAAATTCTCAAGAATTTCTCCACAAATGCATGATTCTTTTAACAGGAAGT GACGACACCGTGGCGGCCAAGATGACCGATCTGGACCCTTTCTTCCAGAT GTACACCGCACAGTTGTGGGGTCTCGTTGTCGTTGTGGAGGGTGCTTTTC AAGGCAAGTTCAAGACCAACACGGTGAGGGACGTCTGGCAACGATGTAAG GAGGAGAGTTGTCTTGGAGACCCTGGAACATCCGGGTACTGGAGCTCCGT ACTCACAAATGTGACATGGATGGAGGAAGCAACAGGTTCCAGATTCATCA ACGAGCTTAGGTATTATCAACAAGATAACACTATCCTGAACATCAAGTTC ACGGTAGATCTAATGCATGAAGATCCTAGGAGACCTGACTGCGCTCTTGG ACGAGTCATCGGGACCATTTCAGCTGTGGACGGAAGTCTGGGACTCCTAC CTGAATTCAACAGAATGCTGTGGTGGCAGGGTCCTCAGTGGCTCTCACCG GGCCCACCGTCGGTATCAGCAGAGAAGAATTTGAATGTGAGTGACTTCTG TAATGCACCATTCTACGTGGACATTCAAAACAGTAAAGTTGTTGTAGATC TCAGCAACAGTTTACCAACCAACCCGGAAGGTGACCTTATAGACAAGGGA AACCTCTTCCTTGTTGTTCTTCGAAATAACTTCTCTTCTTTGGCAATGGC GAGAGGAAAGATCAGGGATTGTAGTGCTCTCCTAAAGCAGGGTTCCATCA ATTTGGGGCGCATTCCATATACTGACTCTGGATTTTAAGTGAATGACACG GGGATAGCAACTTTTTGCTTGACATCCGCGGCATACAGGAGCCCACTGAT GATTGTGAGAGAGGAGGAGCCCAGGTGTCTGGATTGTCCCATACAATGTA CACCTGTCCTTGTTGAACACCTCGATGGACTATACATTGGTCCAGTGGAA GATCGTGTTTTCCGTATTCCGCAGCCTAAAACTGAGATGCCGAAATTAGG TGAAGAAGACGAAAGTGAAGAGGATGAAGATGGTACAGTGTGCTGGTCAT TGACAGTATTTGCTGCACAGTTTGGAAGACCAGAGGCAGGTGTTTTGCTG AGTGTTCAAAAGTACAATAGACCCGGAGTCAGCACAGGCGAACCAGCAGA TGCAATAGAAATCCGTCCTGGTGACTGCAGGGGACATGCTAAAGCTGCGA CAAACGCATATGGCATAGG

Coding sequence (CDS) from alignment at Sc0000120:299461..311429-

>transcript:BL66737_cuf0 ID=transcript:BL66737_cuf0|Name=transcript:BL66737_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=6204bp|location=Sequence derived from alignment at Sc0000120:299461..311429- (Branchiostoma lanceolatum)
AGACAACCTCTACCAGTAGTTCACCAAAAAAAATATTGCATCAGTCTACG
GAAAGATATCATCACAATGAAGCTCACAATCAACATTTTCCTGTTTCTGG
GATTGCTATGGTTGACAAATGCAGGCTATCCCCGTCTTCACTTCGCCGGA
AATTTCCTCGCCGACACCGCCACCCTCAATAATGATCCTCGCCAATTCAA
CATCCACAAGTTTAACGCAAGCCGGGACCCGCCATGCTACCTAAACTACA
CCTTCCCACACTGCGACTGGAACCCGAATGGCAGCAGTGATTTCCGGTTT
GTCAACTGTTTCGTGAAGAAAGTCTGCTACAAGGATGCAAAGTGCTCCAA
ATTTGATGCTCTAGTCGGCAAACGGATCATTGGAAGTGATGACAACGTAG
CTGCCAAGATGACAGATCTGGACCCGTTCTTCCAGATGTACACCGCACAG
CTGTGGGGTCTCGTTGTCGGTGTGGAGGGCGCTTTTCAAGGCAAGTTCAA
GACCAACACGGTGAGGGACGTGTGGCAACGATGTAAAGACGAGGATTGTT
CTGGAGACCCTGGAACATCCGGGTACTGGAGCTCCGTACTCACAAATGTG
ACATGGATGGAGGAAGCAACTGGCTCCAGATTCATCAACGAGCTTAGGCA
TCACGAACAAGATAACACTATCCTGAACATCAAGTTCACAGTAGACCTGA
TGCATGAAGATCCTAACGGAAATGACTTCGCTCTTGGACGAGTCATTGGG
ACCATTTCGGCTGTGGACGGAAGTCTGGAACTCCTGCCTGAATTCAACAG
AATGCTGTGGTGGCAGGGCCCTCAGTGGCTCTCACCAGGCCCACTGTCAG
TATCAGCAGAGAAGAATTCGAATGTGAGTGAATTCTGTAATGCACCATTC
TACGTGGACATTCAAAACAGTAAAGTCGTTGTAGACCTCAGCAACAGTTT
ACAAACCAACCTGGAGGGTGCTCTTATTCATAAGGGAAAACTCTTCCTTG
TCATTCTTCCAAATGACTTTTCTTTTGCAATGGCGGGAGGAAAGATCACA
GATTGTAGAGCTCTCCTACAGCAGGGTTCCAACAAGTTGGGTCGTATTCC
ATATACTAACTCTGGTTTTTTAGTGAATGACACGGGGATAGCAACTTTTT
GCTTGGTAGCCGCGGCATACAGGAGCCCACTGATGATTGTGAGAGAGGAG
GAGCCCAGGTGTCCGGATTGTCCCATACAATGTACACCTGTCCTTGTTGA
ACACCTGGATGGACTATACATTGGTCCAGCGGAAGATCGTGTTTTCCGTA
TTCCGCAGCCTAAAACCGAGATTCCGTTATTAGACGAAGAGGACAAAAGT
GAAGAGGACGAAGATGGTAAAGTCTGCTGGTCATTGACAGTATTTGCTGC
GCGGTTTGGAAGACCAAAGGCAGGTGTTTTGCTGAGTGTTCAAAAGTACA
ATAGACCCGGAGTCAGCACAGGCGAACCAGCAGATGCAATAGAAATCCGT
CCTGGTGACTGCAGGGGACATGCTAAAGCTGCGACAAACGCATATGGCAT
AAGACAACCTCTACCAGTAGTTCACCAAAAAAAATATTGCATCAGTCTAC
GGAAAGATATCATCACAATGAAGCTCACAATCAACATTTTCCTGTTTCTG
GGATTGCTATGGTTGACAAATGCAGGCTATCCCCGTCTTCACTTCGCCGG
AAATTTCCTCGCCGACACCGCCACCCTCAATAATGATCCTCGCCAATTCA
ACATCCACAAGTTTAACGCAAGCCGGGACCCGCCATGCTACCTAAACTAC
ACCTTCCCACACTGCGACTGGAACCCGAATGGCAGCAGTGATTTCCGGTT
TGTCAACTGTTTCGTGAAGAAAGTCTGCTACAAGGATGCAAAGTGCTCCA
AATTTGATGCTCTAGTCGGCAAACGGATCATTGGAAGTGATGACAACGTA
GCTGCCAAGATGACAGATCTGGACCCGTTCTTCCAGATGTACACCGCACA
GCTGTGGGGTCTCGTTGTCGGTGTGGAGGGCGCTTTTCAAGGCAAGTTCA
AGACCAACACGGTGAGGGACGTGTGGCAACGATGTAAAGACGAGGATTGT
TCTGGAGACCCTGGAACATCCGGGTACTGGAGCTCCGTACTCACAAATGT
GACATGGATGGAGGAAGCAACTGGCTCCAGATTCATCAACGAGCTTAGGC
ATCACGAACAAGATAACACTATCCTGAACATCAAGTTCACAGTAGACCTG
ATGCATGAAGATCCTAACGGAAATGACTTCGCTCTTGGACGAGTCATTGG
GACCATTTCGGCTGTGGACGGAAGTCTGGAACTCCTGCCTGAATTCAACA
GAATGCTGTGGTGGCAGGGCCCTCAGTGGCTCTCACCAGGCCCACTGTCA
GTATCAGCAGAGAAGAATTCGAATGTGAGTGAATTCTGTAATGCACCATT
CTACGTGGACATTCAAAACAGTAAAGTCGTTGTAGACCTCAGCAACAGTT
TACAAACCAACCTGGAGGGTGCTCTTATTCATAAGGGAAAACTCTTCCTT
GTCATTCTTCCAAATGACTTTTCTTTTGCAATGGCGGGAGGAAAGATCAC
AGATTGTAGAGCTCTCCTACAGCAGGGTTCCAACAAGTTGGGTCGTATTC
CATATACTAACTCTGGTTTTTTAGTGAATGACACGGGGATAGCAACTTTT
TGCTTGGTAGCCGCGGCATACAGGAGCCCACTGATGATTGTGAGAGAGGA
GGAGCCCAGGTGTCCGGATTGTCCCATACAATGTACACCTGTCCTTGTTG
AACACCTGGATGGACTATACATTGGTCCAGCGGAAGATCGTGTTTTCCGT
ATTCCGCAGCCTAAAACCGAGATTCCGTTATTAGACGAAGAGGACAAAAG
TGAAGAGGACGAAGATGGTAAAGTCTGCTGGTCATTGACAGTATTTGCTG
CGCGGTTTGGAAGACCAAAGGCAGGTGTTTTGCTGAGTGTTCAAAAGTAC
AATAGACCCGGAGTCAGCACAGGCGAACCAGCAGATGCAATAGAAATCCG
TCCTGGTGACTGCAGGGGACATGCTAAAGCTGCGACAAACGCATATGGCA
TAAGACAACCTCTACCAGTAGTTCACCAAAAAAAATATTGCATCAGTCTA
CGGAAAGATATCATCACAATGAAGCTCACAATCAACATTTTCCTGTTTCT
GGGATTGCTATGGTTGACAAATGCAGGCTATCCCCGTCTTCACTTCGCCG
GAAATTTCCTCGCCGACACCGCCACCCTCAATAATGATCCTCGCCAATTC
AACATCCACAAGTTTAACGCAAGCCGGGACCCGCCATGCTACCTAAACTA
CACCTTCCCACACTGCGACTGGAACCCGAATGGCAGCAGTGATTTCCGGT
TTGTCAACTGTTTCGTGAAGAAAGTCTGCTACAAGGATGCAAAGTGCTCC
AAATTTGATGCTCTAGTCGGCAAACGGATCATTGGAAGTGATGACAACGT
AGCTGCCAAGATGACAGATCTGGACCCGTTCTTCCAGATGTACACCGCAC
AGCTGTGGGGTCTCGTTGTCGGTGTGGAGGGCGCTTTTCAAGGCAAGTTC
AAGACCAACACGGTGAGGGACGTGTGGCAACGATGTAAAGACGAGGATTG
TTCTGGAGACCCTGGAACATCCGGGTACTGGAGCTCCGTACTCACAAATG
TGACATGGATGGAGGAAGCAACTGGCTCCAGATTCATCAACGAGCTTAGG
CATCACGAACAAGATAACACTATCCTGAACATCAAGTTCACAGTAGACCT
GATGCATGAAGATCCTAACGGAAATGACTTCGCTCTTGGACGAGTCATTG
GGACCATTTCGGCTGTGGACGGAAGTCTGGAACTCCTGCCTGAATTCAAC
AGAATGCTGTGGTGGCAGGGCCCTCAGTGGCTCTCACCAGGCCCACTGTC
AGTATCAGCAGAGAAGAATTCGAATGTGAGTGAATTCTGTAATGCACCAT
TCTACGTGGACATTCAAAACAGTAAAGTCGTTGTAGACCTCAGCAACAGT
TTACAAACCAACCTGGAGGGTGCTCTTATTCATAAGGGAAAACTCTTCCT
TGTCATTCTTCCAAATGACTTTTCTTTTGCAATGGCGGGAGGAAAGATCA
CAGATTGTAGAGCTCTCCTACAGCAGGGTTCCAACAAGTTGGGTCGTATT
CCATATACTAACTCTGGTTTTTTAGTGAATGACACGGGGATAGCAACTTT
TTGCTTGGTAGCCGCGGCATACAGGAGCCCACTGATGATTGTGAGAGAGG
AGGAGCCCAGGTGTCCGGATTGTCCCATACAATGTACACCTGTCCTTGTT
GAACACCTGGATGGACTATACATTGGTCCAGCGGAAGATCGTGTTTTCCG
TATTCCGCAGCCTAAAACCGAGATTCCGTTATTAGACGAAGAGGACAAAA
GTGAAGAGGACGAAGATGGTAAAGTCTGCTGGTCATTGACAGTATTTGCT
GCGCGGTTTGGAAGACCAAAGGCAGGTGTTTTGCTGAGTGTTCAAAAGTA
CAATAGACCCGGAGTCAGCACAGGCGAACCAGCAGATGCAATAGAAATCC
GTCCTGGTGACTGCAGGGGACATGCTAAAGCTGCGACAAACGCATATGGC
ATAAGACAACCTCTACCAGTAGTTCACCAAAAAAAATATTGCATCAGTCT
ACGGAAAGATATCATCACAATGAAGCTCACAATCAACATTTTCCTGTTTC
TGGGATTGCTATGGTTGACAAATGCAGGCTATCCCCGTCTTCACTTCGCC
GGAAATTTCCTCGCCGACACCGCCACCCTCAATAATGATCCTCGCCAATT
CAACATCCACAAGTTTAACGCAAGCCGGGACCCGCCATGCTACCTAAACT
ACACCTTCCCACACTGCGACTGGAACCCGAATGGCAGCAGTGATTTCCGG
TTTGTCAACTGTTTCGTGAAGAAAGTCTGCTACAAGGATGCAAAGTGCTC
CAAATTTGATGCTCTAGTCGGCAAACGGATCATTGGAAGTGATGACAACG
TAGCTGCCAAGATGACAGATCTGGACCCGTTCTTCCAGATGTACACCGCA
CAGCTGTGGGGTCTCGTTGTCGGTGTGGAGGGCGCTTTTCAAGGCAAGTT
CAAGACCAACACGGTGAGGGACGTGTGGCAACGATGTAAAGACGAGGATT
GTTCTGGAGACCCTGGAACATCCGGGTACTGGAGCTCCGTACTCACAAAT
GTGACATGGATGGAGGAAGCAACTGGCTCCAGATTCATCAACGAGCTTAG
GCATCACGAACAAGATAACACTATCCTGAACATCAAGTTCACAGTAGACC
TGATGCATGAAGATCCTAACGGAAATGACTTCGCTCTTGGACGAGTCATT
GGGACCATTTCGGCTGTGGACGGAAGTCTGGAACTCCTGCCTGAATTCAA
CAGAATGCTGTGGTGGCAGGGCCCTCAGTGGCTCTCACCAGGCCCACTGT
CAGTATCAGCAGAGAAGAATTCGAATGTGAGTGAATTCTGTAATGCACCA
TTCTACGTGGACATTCAAAACAGTAAAGTCGTTGTAGACCTCAGCAACAG
TTTACAAACCAACCTGGAGGGTGCTCTTATTCATAAGGGAAAACTCTTCC
TTGTCATTCTTCCAAATGACTTTTCTTTTGCAATGGCGGGAGGAAAGATC
ACAGATTGTAGAGCTCTCCTACAGCAGGGTTCCAACAAGTTGGGTCGTAT
TCCATATACTAACTCTGGTTTTTTAGTGAATGACACGGGGATAGCAACTT
TTTGCTTGGTAGCCGCGGCATACAGGAGCCCACTGATGATTGTGAGAGAG
GAGGAGCCCAGGTGTCCGGATTGTCCCATACAATGTACACCTGTCCTTGT
TGAACACCTGGATGGACTATACATTGGTCCAGCGGAAGATCGTGTTTTCC
GTATTCCGCAGCCTAAAACCGAGATTCCGTTATTAGACGAAGAGGACAAA
AGTGAAGAGGACGAAGATGGTAAAGTCTGCTGGTCATTGACAGTATTTGC
TGCGCGGTTTGGAAGACCAAAGGCAGGTGTTTTGCTGAGTGTTCAAAAGT
ACAATAGACCCGGAGTCAGCACAGGCGAACCAGCAGATGCAATAGAAATC
CGTCCTGGTGACTGCAGGGGACATGCTAAAGCTGCGACAAACGCATATGG
CATA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL66737gene:BL66737Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL66737_cuf0transcript:BL66737_cuf0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL66737_cuf0-E1BL66737_cuf0-E1-1564476830-322470Branchiostoma lanceolatumexon
BL66737_cuf0-E2BL66737_cuf0-E2-1564476830-322467Branchiostoma lanceolatumexon
BL66737_cuf0-E3BL66737_cuf0-E3-1564476830-322465Branchiostoma lanceolatumexon
BL66737_cuf0-E4BL66737_cuf0-E4-1564476830-322463Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000120genomeSc0000120:299461..311429 -
Properties
Property NameValue
Transcript idBL66737_cuf0
Biotypeprotein_coding