transcript:BL66982_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL66982_cuf0
Unique Nametranscript:BL66982_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL66982_cuf0

>transcript:BL66982_cuf0-protein ID=transcript:BL66982_cuf0-protein|Name=transcript:BL66982_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=164bp
GETLHLVCEASGVPPPTIIVTLPSGLNATDDSSGRVTVGVNGTIAITNVT
AADAGLYICIASNPVGSASATVFVIINVQTAGSVLPPVNTSPVVSTSAPH
DNSEGYPTNFPLPFAIGLGTFLGVLLVSSLCIALWWKRETKKATVNSAPT
IDPPNTDDMANSYN
Run BLAST on NCBI

mRNA from alignment at Sc0000014:3880611..3881104+

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL66982_cuf0 ID=transcript:BL66982_cuf0|Name=transcript:BL66982_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=494bp|location=Sequence derived from alignment at Sc0000014:3880611..3881104+ (Branchiostoma lanceolatum)
GGGGAGACTCTACATTTGGTCTGCGAAGCTTCAGGTGTACCTCCTCCAAC
TATCATTGTCACTCTCCCATCTGGACTGAATGCAACTGATGATTCCAGTG
GGAGAGTGACTGTGGGAGTGAATGGTACCATCGCTATAACGAATGTCACT
GCAGCAGATGCTGGCCTGTACATCTGTATTGCGTCAAACCCTGTCGGCTC
GGCGTCAGCCACAGTGTTTGTTATTATTAATGTCCAAACCGCCGGATCTG
TTTTGCCCCCTGTCAATACTTCGCCTGTAGTGTCAACATCAGCTCCACAT
GACAATTCAGAAGGCTATCCGACAAATTTTCCCCTGCCATTTGCTATTGG
CCTCGGCACATTTCTCGGAGTTTTGTTGGTTTCTAGTCTTTGTATTGCAC
TTTGGTGGAAGAGAGAGACTAAAAAGGCCACTGTGAACTCAGCACCGACA
ATCGATCCCCCAAATACAGACGACATGGCAAACAGTTACAACAA

Coding sequence (CDS) from alignment at Sc0000014:3880611..3881104+

>transcript:BL66982_cuf0 ID=transcript:BL66982_cuf0|Name=transcript:BL66982_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=492bp|location=Sequence derived from alignment at Sc0000014:3880611..3881104+ (Branchiostoma lanceolatum)
GGGGAGACTCTACATTTGGTCTGCGAAGCTTCAGGTGTACCTCCTCCAAC
TATCATTGTCACTCTCCCATCTGGACTGAATGCAACTGATGATTCCAGTG
GGAGAGTGACTGTGGGAGTGAATGGTACCATCGCTATAACGAATGTCACT
GCAGCAGATGCTGGCCTGTACATCTGTATTGCGTCAAACCCTGTCGGCTC
GGCGTCAGCCACAGTGTTTGTTATTATTAATGTCCAAACCGCCGGATCTG
TTTTGCCCCCTGTCAATACTTCGCCTGTAGTGTCAACATCAGCTCCACAT
GACAATTCAGAAGGCTATCCGACAAATTTTCCCCTGCCATTTGCTATTGG
CCTCGGCACATTTCTCGGAGTTTTGTTGGTTTCTAGTCTTTGTATTGCAC
TTTGGTGGAAGAGAGAGACTAAAAAGGCCACTGTGAACTCAGCACCGACA
ATCGATCCCCCAAATACAGACGACATGGCAAACAGTTACAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL66982gene:BL66982Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL66982_cuf0-E1BL66982_cuf0-E1-1564476830-122289Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL66982_cuf0transcript:BL66982_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000014genomeSc0000014:3880611..3881104 +
Properties
Property NameValue
Transcript idBL66982_cuf0
Biotypeprotein_coding