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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL67326_cuf0 >transcript:BL67326_cuf0-protein ID=transcript:BL67326_cuf0-protein|Name=transcript:BL67326_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=246bp
LQAIFNDASEMIEGMVQKMESFRTKAVKLREKSSVKMGQGPLTSELDDVL
KEFRVERQAYHSKSFIGNHVNTMLKDEAICKLTGRVETTIGAIIQKYEDM
PVCLVPQSTRTARKYRELFLLFAKCHRAYSQAGPMDQPAINELAQSIKDF
MAAYRRNVPNGTIPMKFHMMEDHVVPCIRKWGFGLGFMAEQGIEQVHSLF
NSLATSINSIPDPVARLKSLLKTHLIGVSPDHVGGVPKPVARKKNT Run BLAST on NCBI mRNA from alignment at xpSc0039852:4547..6699- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL67326_cuf0 ID=transcript:BL67326_cuf0|Name=transcript:BL67326_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2153bp|location=Sequence derived from alignment at xpSc0039852:4547..6699- (Branchiostoma lanceolatum)
CTCCAAGCCATCTTTAACGACGCTAGTGAAATGATTGAGGGGATGGTGCA
GAAGATGGAGTCATTTGTAAGTACACAATACAGAAAGTCTATGCACAATT
ACATACATTATGTGGTAGCATTTCAGTTATCATTTTGAAATTTGTGCCAG
TGTTTTAACAGTATTCTGAATTCACCCCTTTTTTGTTTATCCAGAGGACA
AAGGCGGTCAAACTCCGAGAAAAATCTTCGGTCAAGATGGGCCAAGGACC
TTTAACAAGCGAACTGGATGATGTCCTGAAGGAGTTTCGAGTGGAGCGGC
AAGCATACCACTCGAAGTCCTTCATAGGGAACCATGTAAACACCATGCTC
AAGGCAAGTATTTGTTTCTTTTCACACTTTTTGGTTAGAAAAGAACATGC
TTTTAAAGAAAGAAATGAGTAATGATGTTCAATTAATGTACACAGGACGA
GGCAATATGCAAATTGACGGGAAGGGTTGAAACCACCATCGGGGCCATCA
TTCAGAAGTATGAAGACATGCCAGTGTGCCTGGTGCCACAATCGACCAGG
ACCGCCAGAAAATACAGGGAGCTGTTCTTGCTGTTTGCAAAGTGCCATAG
GGCATACTCACAGGCTGGCCCAATGGACCAGCCAGCCATAAATGAGCTTG
GTGAGTTCTCATTCCAATAAGTCTGTCATGACATCATTATTCAGCTTGTG
GCAAATCAAATTTCAATAAAATCCTGCAAATTCACATGTGTTTTAAAAAC
GGCTTGGTTTTTGTTCTAGCCCAGTCCATCAAAGACTTCATGGCAGCCTA
CAGGCGGAATGTACCAAACGGAACCATACCTATGAAGTTCCACATGATGG
AAGACCACGTCGTACCTTGTATCAGGAAGTGGGGCTTCGGCCTGGGTTTC
ATGGCGGAGCAAGGGATTGAACAGGTGCACAGCCTGTTCAATTCCCTTGC
GACGTCGATAAACAGCATCCCAGATCCCGTAGCCAGGCTCAAGTCCCTCC
TCAAGACACATCTCATAGGGGTGAGTCCCGACCACGTGGGCGGCGTCCCA
AAACCTGTGGCGAGAAAGAAGAACACGTAGATTCAAACAAATAGTATTGT
AATACGGAATAAGAATGGCCGTGATTCCTTATTACTATGTATAGATTATC
CGTCAGGATGTAAAAGACTTTGATATTGGTTATGTCATTACTTTGACAAT
CTCTGTTGTACTACTCTACATGTACCTATATTGACAGTACTTGTTAATCT
GAAATAATCGAAAACTTTGATCAACTGTGTAATACAACATTCACAGAAAC
CCAGCATATTGTCTTGTCTTGCATTACAATGCAACTCGGCACTGGCATGC
TGCATTTCACTTACTATGATGTGCATTGTAGATCCCTTTTTTGCTCTGTC
CCTGTTTAGAGTAAAGCATATTGCTCCTAACAGTGAAATTATTGCCACTC
AACTCACTGTAAGTTTTGTTAACTACATGTGAATGTTACTGTCTTCTATT
TACAGTCATTCAAACAAGTTCAAATCCAACATGCATCCTGAACATGTAGA
TAATTACCATCAGACTGATTTGCAACTCATACTAATTAAAATCCTACATT
AGATTACCAGTACCTAGAATTTGTTGTCACTTTTCCCTGGCTTTTTGTTC
ACTCCATGCTGGGGATTGTAAAAGCTACCACCAAAGAGGAGTTGAACCTT
ATGTATCATAATGTACGCGCATATTCAATAAACTTGTGCATGTCATATTA
TGATATACAATACAAGTTTCATAGTTAGTGTATTCATGATCAACGTCACA
AATAATTACCAGTAGACTAGTTTGCAATTGCAATAGCATGTTGACTTATT
CTTTCATATGTTTCGATTGTTTGTATCACAAAATTCACATACATGAAGTT
CATGCAGACATTCCCGAACACAAATAAGACAGCGTTGGAAAAGAAAGTTT
GTCTTGAAAATACAAATTTAAGTTACATTACCATATCCACAACATGATCT
CTGAGGGCCTCATGTTCATTGTGTGCTTCTGCTTTCACTCTTCAAACAGC
AAACAAGTAGGCTGGTGGCTGGTTGGGTGCTGAGAGGAGAAAGTAAAACA
GAGAAAGTCAGATAAATGTAGTAGAGCTGAACAAGACTGACTTGTTATCT
CCA Coding sequence (CDS) from alignment at xpSc0039852:4547..6699- >transcript:BL67326_cuf0 ID=transcript:BL67326_cuf0|Name=transcript:BL67326_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2964bp|location=Sequence derived from alignment at xpSc0039852:4547..6699- (Branchiostoma lanceolatum)
CTCCAAGCCATCTTTAACGACGCTAGTGAAATGATTGAGGGGATGGTGCA
GAAGATGGAGTCATTTAGGACAAAGGCGGTCAAACTCCGAGAAAAATCTT
CGGTCAAGATGGGCCAAGGACCTTTAACAAGCGAACTGGATGATGTCCTG
AAGGAGTTTCGAGTGGAGCGGCAAGCATACCACTCGAAGTCCTTCATAGG
GAACCATGTAAACACCATGCTCAAGGACGAGGCAATATGCAAATTGACGG
GAAGGGTTGAAACCACCATCGGGGCCATCATTCAGAAGTATGAAGACATG
CCAGTGTGCCTGGTGCCACAATCGACCAGGACCGCCAGAAAATACAGGGA
GCTGTTCTTGCTGTTTGCAAAGTGCCATAGGGCATACTCACAGGCTGGCC
CAATGGACCAGCCAGCCATAAATGAGCTTGCCCAGTCCATCAAAGACTTC
ATGGCAGCCTACAGGCGGAATGTACCAAACGGAACCATACCTATGAAGTT
CCACATGATGGAAGACCACGTCGTACCTTGTATCAGGAAGTGGGGCTTCG
GCCTGGGTTTCATGGCGGAGCAAGGGATTGAACAGGTGCACAGCCTGTTC
AATTCCCTTGCGACGTCGATAAACAGCATCCCAGATCCCGTAGCCAGGCT
CAAGTCCCTCCTCAAGACACATCTCATAGGGGTGAGTCCCGACCACGTGG
GCGGCGTCCCAAAACCTGTGGCGAGAAAGAAGAACACGTAGCTCCAAGCC
ATCTTTAACGACGCTAGTGAAATGATTGAGGGGATGGTGCAGAAGATGGA
GTCATTTAGGACAAAGGCGGTCAAACTCCGAGAAAAATCTTCGGTCAAGA
TGGGCCAAGGACCTTTAACAAGCGAACTGGATGATGTCCTGAAGGAGTTT
CGAGTGGAGCGGCAAGCATACCACTCGAAGTCCTTCATAGGGAACCATGT
AAACACCATGCTCAAGGACGAGGCAATATGCAAATTGACGGGAAGGGTTG
AAACCACCATCGGGGCCATCATTCAGAAGTATGAAGACATGCCAGTGTGC
CTGGTGCCACAATCGACCAGGACCGCCAGAAAATACAGGGAGCTGTTCTT
GCTGTTTGCAAAGTGCCATAGGGCATACTCACAGGCTGGCCCAATGGACC
AGCCAGCCATAAATGAGCTTGCCCAGTCCATCAAAGACTTCATGGCAGCC
TACAGGCGGAATGTACCAAACGGAACCATACCTATGAAGTTCCACATGAT
GGAAGACCACGTCGTACCTTGTATCAGGAAGTGGGGCTTCGGCCTGGGTT
TCATGGCGGAGCAAGGGATTGAACAGGTGCACAGCCTGTTCAATTCCCTT
GCGACGTCGATAAACAGCATCCCAGATCCCGTAGCCAGGCTCAAGTCCCT
CCTCAAGACACATCTCATAGGGGTGAGTCCCGACCACGTGGGCGGCGTCC
CAAAACCTGTGGCGAGAAAGAAGAACACGTAGCTCCAAGCCATCTTTAAC
GACGCTAGTGAAATGATTGAGGGGATGGTGCAGAAGATGGAGTCATTTAG
GACAAAGGCGGTCAAACTCCGAGAAAAATCTTCGGTCAAGATGGGCCAAG
GACCTTTAACAAGCGAACTGGATGATGTCCTGAAGGAGTTTCGAGTGGAG
CGGCAAGCATACCACTCGAAGTCCTTCATAGGGAACCATGTAAACACCAT
GCTCAAGGACGAGGCAATATGCAAATTGACGGGAAGGGTTGAAACCACCA
TCGGGGCCATCATTCAGAAGTATGAAGACATGCCAGTGTGCCTGGTGCCA
CAATCGACCAGGACCGCCAGAAAATACAGGGAGCTGTTCTTGCTGTTTGC
AAAGTGCCATAGGGCATACTCACAGGCTGGCCCAATGGACCAGCCAGCCA
TAAATGAGCTTGCCCAGTCCATCAAAGACTTCATGGCAGCCTACAGGCGG
AATGTACCAAACGGAACCATACCTATGAAGTTCCACATGATGGAAGACCA
CGTCGTACCTTGTATCAGGAAGTGGGGCTTCGGCCTGGGTTTCATGGCGG
AGCAAGGGATTGAACAGGTGCACAGCCTGTTCAATTCCCTTGCGACGTCG
ATAAACAGCATCCCAGATCCCGTAGCCAGGCTCAAGTCCCTCCTCAAGAC
ACATCTCATAGGGGTGAGTCCCGACCACGTGGGCGGCGTCCCAAAACCTG
TGGCGAGAAAGAAGAACACGTAGCTCCAAGCCATCTTTAACGACGCTAGT
GAAATGATTGAGGGGATGGTGCAGAAGATGGAGTCATTTAGGACAAAGGC
GGTCAAACTCCGAGAAAAATCTTCGGTCAAGATGGGCCAAGGACCTTTAA
CAAGCGAACTGGATGATGTCCTGAAGGAGTTTCGAGTGGAGCGGCAAGCA
TACCACTCGAAGTCCTTCATAGGGAACCATGTAAACACCATGCTCAAGGA
CGAGGCAATATGCAAATTGACGGGAAGGGTTGAAACCACCATCGGGGCCA
TCATTCAGAAGTATGAAGACATGCCAGTGTGCCTGGTGCCACAATCGACC
AGGACCGCCAGAAAATACAGGGAGCTGTTCTTGCTGTTTGCAAAGTGCCA
TAGGGCATACTCACAGGCTGGCCCAATGGACCAGCCAGCCATAAATGAGC
TTGCCCAGTCCATCAAAGACTTCATGGCAGCCTACAGGCGGAATGTACCA
AACGGAACCATACCTATGAAGTTCCACATGATGGAAGACCACGTCGTACC
TTGTATCAGGAAGTGGGGCTTCGGCCTGGGTTTCATGGCGGAGCAAGGGA
TTGAACAGGTGCACAGCCTGTTCAATTCCCTTGCGACGTCGATAAACAGC
ATCCCAGATCCCGTAGCCAGGCTCAAGTCCCTCCTCAAGACACATCTCAT
AGGGGTGAGTCCCGACCACGTGGGCGGCGTCCCAAAACCTGTGGCGAGAA
AGAAGAACACGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039852 | genome | xpSc0039852:4547..6699 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL67326_cuf0 |
| Biotype | protein_coding |
|
